RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 IGKV2-28A0A075B6P5 120 aa11.15□□□□□ -0.62
USHBP1-203ENST00000431146 IGKV2D-28P01615 120 aa11.15□□□□□ -0.62
USHBP1-203ENST00000431146 CSMD3Q7Z407 3707 aa11.15□□□□□ -0.62
USHBP1-203ENST00000431146 LOC107984640A0A0U1RRK4 108 aa11.15□□□□□ -0.62
USHBP1-203ENST00000431146 HIGD2BQ4VC39 106 aa11.15□□□□□ -0.62
USHBP1-203ENST00000431146 LINC00337Q8N6G1 96 aa11.15□□□□□ -0.62
USHBP1-203ENST00000431146 IGKV2D-24A0A075B6R9 120 aa11.14□□□□□ -0.63
USHBP1-203ENST00000431146 DNAH10OSP0CZ25 163 aa11.14□□□□□ -0.63
USHBP1-203ENST00000431146 C1orf43Q9BWL3 253 aa11.14□□□□□ -0.63
USHBP1-203ENST00000431146 CLEC2BQ92478 149 aa11.13□□□□□ -0.63
USHBP1-203ENST00000431146 DNAH1Q9P2D7 4330 aa11.11□□□□□ -0.63
USHBP1-203ENST00000431146 ANKRD29Q8N6D5 301 aa11.11□□□□□ -0.63
USHBP1-203ENST00000431146 TENM2Q9NT68 2774 aa11.11□□□□□ -0.63
USHBP1-203ENST00000431146 MEGF8Q7Z7M0 2845 aa11.11□□□□□ -0.63
USHBP1-203ENST00000431146 COX6CP09669 75 aa11.1□□□□□ -0.63
USHBP1-203ENST00000431146 COX17Q14061 63 aa11.1□□□□□ -0.63
USHBP1-203ENST00000431146 C15orf56Q8N910 161 aa11.1□□□□□ -0.63
USHBP1-203ENST00000431146 NTN5Q8WTR8 489 aaPredicted RBP11.1□□□□□ -0.63
USHBP1-203ENST00000431146 PRR3P79522 188 aaKnown RBP11.09□□□□□ -0.63
USHBP1-203ENST00000431146 C3orf22Q8N5N4 141 aa11.09□□□□□ -0.63
USHBP1-203ENST00000431146 TRAV13-2A0A0B4J235 113 aa11.09□□□□□ -0.63
USHBP1-203ENST00000431146 ZNF561-AS1K7EIQ3 104 aa11.09□□□□□ -0.63
USHBP1-203ENST00000431146 ATXN8Q156A1 80 aa11.09□□□□□ -0.63
USHBP1-203ENST00000431146 LINC01600Q96MT4 127 aa11.09□□□□□ -0.63
USHBP1-203ENST00000431146 TRBV7-7A0A0K0K1E9 115 aa11.08□□□□□ -0.64
USHBP1-203ENST00000431146 UQCRQO14949 82 aa11.08□□□□□ -0.64
USHBP1-203ENST00000431146 C9orf153Q5TBE3 101 aa11.08□□□□□ -0.64
USHBP1-203ENST00000431146 C6orf48Q9UBA6 75 aa11.08□□□□□ -0.64
USHBP1-203ENST00000431146 DNAH7Q8WXX0 4024 aa11.07□□□□□ -0.64
USHBP1-203ENST00000431146 Q8NDZ9 215 aa11.06□□□□□ -0.64
USHBP1-203ENST00000431146 CAMK2N2Q96S95 79 aa11.06□□□□□ -0.64
USHBP1-203ENST00000431146 DYNC2H1Q8NCM8 4307 aaKnown RBP11.06□□□□□ -0.64
USHBP1-203ENST00000431146 LINC01620Q4KN68 170 aa11.06□□□□□ -0.64
USHBP1-203ENST00000431146 IMUPQ9GZP8 106 aa11.05□□□□□ -0.64
USHBP1-203ENST00000431146 CASC10Q5T4H9 136 aa11.05□□□□□ -0.64
USHBP1-203ENST00000431146 SLC25A20O43772 301 aa11.04□□□□□ -0.64
USHBP1-203ENST00000431146 Q6ZRU5 148 aa11.04□□□□□ -0.64
USHBP1-203ENST00000431146 SMIM11BQ8TCY0 68 aa11.04□□□□□ -0.64
USHBP1-203ENST00000431146 UPK3BQ9BT76 320 aa11.03□□□□□ -0.64
USHBP1-203ENST00000431146 PLECQ15149 4684 aaKnown RBP11.03□□□□□ -0.64
USHBP1-203ENST00000431146 GVQW2A0A096LPI5 108 aaPredicted RBP11.03□□□□□ -0.64
USHBP1-203ENST00000431146 LST1O00453 97 aa11.03□□□□□ -0.64
USHBP1-203ENST00000431146 NCR3O14931 201 aa11.02□□□□□ -0.64
USHBP1-203ENST00000431146 XAGE1AQ9HD64 81 aa11.02□□□□□ -0.64
USHBP1-203ENST00000431146 APLNQ9ULZ1 77 aa11.02□□□□□ -0.64
USHBP1-203ENST00000431146 DNAH10Q8IVF4 4471 aa11.02□□□□□ -0.65
USHBP1-203ENST00000431146 FAM240AA0A1B0GVK7 77 aa11.02□□□□□ -0.65
USHBP1-203ENST00000431146 RPL28P46779 137 aaKnown RBP11.02□□□□□ -0.65
USHBP1-203ENST00000431146 SEC61GP60059 68 aa11□□□□□ -0.65
USHBP1-203ENST00000431146 FAM218AQ96MZ4 157 aa11□□□□□ -0.65
USHBP1-203ENST00000431146 PRO0628Q9UI54 55 aa11□□□□□ -0.65
USHBP1-203ENST00000431146 NDUFC2O95298 119 aa10.99□□□□□ -0.65
USHBP1-203ENST00000431146 UBE2DNLQ8IWF7 75 aa10.99□□□□□ -0.65
USHBP1-203ENST00000431146 KRTAP1-5Q9BYS1 174 aa10.99□□□□□ -0.65
USHBP1-203ENST00000431146 LECT2O14960 151 aa10.99□□□□□ -0.65
USHBP1-203ENST00000431146 CRYGAP11844 174 aa10.99□□□□□ -0.65
USHBP1-203ENST00000431146 C2orf48Q96LS8 159 aa10.98□□□□□ -0.65
USHBP1-203ENST00000431146 TRBV10-2A0A0K0K1G8 114 aa10.97□□□□□ -0.65
USHBP1-203ENST00000431146 STARD9Q9P2P6 4700 aa10.97□□□□□ -0.65
USHBP1-203ENST00000431146 USP17L23D6RBM5 183 aa10.97□□□□□ -0.65
USHBP1-203ENST00000431146 TMEM258P61165 79 aa10.96□□□□□ -0.66
USHBP1-203ENST00000431146 SYCNQ0VAF6 134 aa10.96□□□□□ -0.66
USHBP1-203ENST00000431146 Q5XG85 94 aa10.95□□□□□ -0.66
USHBP1-203ENST00000431146 GAGE2AQ6NT46 116 aa10.95□□□□□ -0.66
USHBP1-203ENST00000431146 MUC7Q8TAX7 377 aa10.95□□□□□ -0.66
USHBP1-203ENST00000431146 RPL18AQ02543 176 aaKnown RBP10.94□□□□□ -0.66
USHBP1-203ENST00000431146 A0A087WYN8 130 aa10.94□□□□□ -0.66
USHBP1-203ENST00000431146 SLPIP03973 132 aa10.94□□□□□ -0.66
USHBP1-203ENST00000431146 RMI2Q96E14 147 aa10.94□□□□□ -0.66
USHBP1-203ENST00000431146 NDUFC2-KCTD14E9PQ53 114 aa10.93□□□□□ -0.66
USHBP1-203ENST00000431146 COX7CP15954 63 aa10.93□□□□□ -0.66
USHBP1-203ENST00000431146 S100A7L2Q5SY68 101 aa10.93□□□□□ -0.66
USHBP1-203ENST00000431146 Q6ZRP5 223 aa10.93□□□□□ -0.66
USHBP1-203ENST00000431146 FAM236AA0A1B0GUQ0 79 aa10.93□□□□□ -0.66
USHBP1-203ENST00000431146 FAM236BA0A1B0GV22 79 aa10.93□□□□□ -0.66
USHBP1-203ENST00000431146 DPH3Q96FX2 82 aa10.93□□□□□ -0.66
USHBP1-203ENST00000431146 NUPR2A6NF83 97 aa10.91□□□□□ -0.66
USHBP1-203ENST00000431146 C4orf26Q17RF5 130 aa10.91□□□□□ -0.66
USHBP1-203ENST00000431146 HRCT1Q6UXD1 115 aa10.91□□□□□ -0.66
USHBP1-203ENST00000431146 TEX49A0A1B0GTD5 131 aa10.9□□□□□ -0.66
USHBP1-203ENST00000431146 TRACP01848 142 aa10.9□□□□□ -0.66
USHBP1-203ENST00000431146 H3BT86 120 aa10.9□□□□□ -0.67
USHBP1-203ENST00000431146 H0YGX0 51 aa10.88□□□□□ -0.67
USHBP1-203ENST00000431146 C6orf99Q4VX62 202 aa10.88□□□□□ -0.67
USHBP1-203ENST00000431146 V9GYY9 64 aa10.88□□□□□ -0.67
USHBP1-203ENST00000431146 TRBV10-3A0A0K0K1G6 114 aa10.87□□□□□ -0.67
USHBP1-203ENST00000431146 VPREB1P12018 145 aa10.87□□□□□ -0.67
USHBP1-203ENST00000431146 C9orf129Q5T035 196 aaKnown RBP10.87□□□□□ -0.67
USHBP1-203ENST00000431146 FBN3Q75N90 2809 aa10.86□□□□□ -0.67
USHBP1-203ENST00000431146 IGLV6-57P01721 117 aa10.86□□□□□ -0.67
USHBP1-203ENST00000431146 ACYP1P07311 99 aa10.85□□□□□ -0.67
USHBP1-203ENST00000431146 BAALC-AS2P0C853 105 aa10.85□□□□□ -0.67
USHBP1-203ENST00000431146 PSCAO43653 123 aa10.85□□□□□ -0.67
USHBP1-203ENST00000431146 DNAL4O96015 105 aa10.85□□□□□ -0.67
USHBP1-203ENST00000431146 TGP01266 2768 aa10.84□□□□□ -0.67
USHBP1-203ENST00000431146 VPS13DQ5THJ4 4388 aa10.83□□□□□ -0.68
USHBP1-203ENST00000431146 OXTP01178 125 aa10.82□□□□□ -0.68
USHBP1-203ENST00000431146 C22orf24Q9Y442 160 aa10.82□□□□□ -0.68
USHBP1-203ENST00000431146 SERTAD4-AS1Q5TG53 156 aa10.82□□□□□ -0.68
USHBP1-203ENST00000431146 TRAV23DV6A0A075B6W5 121 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms