RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 ACACBO00763 2458 aa3.96□□□□□ -1.78
UBR3-204ENST00000430321 KRTAP1-3Q8IUG1 177 aa3.96□□□□□ -1.78
UBR3-204ENST00000430321 PRRC2AP48634 2157 aaKnown RBP3.96□□□□□ -1.78
UBR3-204ENST00000430321 A8MWP4 228 aa3.95□□□□□ -1.78
UBR3-204ENST00000430321 CASC10Q5T4H9 136 aa3.95□□□□□ -1.78
UBR3-204ENST00000430321 SHANK1Q9Y566 2161 aa3.95□□□□□ -1.78
UBR3-204ENST00000430321 COL27A1Q8IZC6 1860 aaPredicted RBP3.95□□□□□ -1.78
UBR3-204ENST00000430321 IGLV5-37A0A075B6J1 123 aa3.95□□□□□ -1.78
UBR3-204ENST00000430321 ABCA1O95477 2261 aa3.95□□□□□ -1.78
UBR3-204ENST00000430321 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
UBR3-204ENST00000430321 OXTP01178 125 aa3.95□□□□□ -1.78
UBR3-204ENST00000430321 ROS1P08922 2347 aa3.94□□□□□ -1.78
UBR3-204ENST00000430321 MRPL34Q9BQ48 92 aaKnown RBP3.94□□□□□ -1.78
UBR3-204ENST00000430321 KRTAP1-1Q07627 177 aa3.94□□□□□ -1.78
UBR3-204ENST00000430321 PCSK5Q92824 1860 aa3.94□□□□□ -1.78
UBR3-204ENST00000430321 SPTAN1Q13813 2472 aaKnown RBP3.94□□□□□ -1.78
UBR3-204ENST00000430321 IGLV6-57P01721 117 aa3.94□□□□□ -1.78
UBR3-204ENST00000430321 VPREB1P12018 145 aa3.94□□□□□ -1.78
UBR3-204ENST00000430321 CUL9Q8IWT3 2517 aa3.94□□□□□ -1.78
UBR3-204ENST00000430321 PIEZO1Q92508 2521 aa3.94□□□□□ -1.78
UBR3-204ENST00000430321 TSPEAR-AS2P59090 65 aa3.93□□□□□ -1.78
UBR3-204ENST00000430321 ADAMTSL4-AS1Q5T5F5 129 aa3.93□□□□□ -1.78
UBR3-204ENST00000430321 Q8N3U1 123 aa3.93□□□□□ -1.78
UBR3-204ENST00000430321 LCE6AA0A183 80 aa3.93□□□□□ -1.78
UBR3-204ENST00000430321 NAV2Q8IVL1 2488 aa3.93□□□□□ -1.78
UBR3-204ENST00000430321 A0A1B0GU69 56 aa3.92□□□□□ -1.78
UBR3-204ENST00000430321 GAS8-AS1O95177 125 aa3.92□□□□□ -1.78
UBR3-204ENST00000430321 PRR3P79522 188 aaKnown RBP3.92□□□□□ -1.78
UBR3-204ENST00000430321 RETNLBQ9BQ08 111 aa3.92□□□□□ -1.78
UBR3-204ENST00000430321 KRTAP10-3P60369 221 aa3.91□□□□□ -1.78
UBR3-204ENST00000430321 PCOTHQ58A44 107 aa3.91□□□□□ -1.78
UBR3-204ENST00000430321 NBASA2RRP1 2371 aa3.91□□□□□ -1.78
UBR3-204ENST00000430321 SEC61BP60468 96 aaKnown RBP3.91□□□□□ -1.78
UBR3-204ENST00000430321 ERC2-IT1O76042 136 aa3.9□□□□□ -1.78
UBR3-204ENST00000430321 SNURFQ9Y675 71 aa3.9□□□□□ -1.78
UBR3-204ENST00000430321 MPLKIPQ8TAP9 179 aa3.9□□□□□ -1.79
UBR3-204ENST00000430321 CHTF8P0CG12 524 aa3.9□□□□□ -1.79
UBR3-204ENST00000430321 URB1-AS1Q96HZ7 61 aa3.89□□□□□ -1.79
UBR3-204ENST00000430321 Q6ZSA8 131 aa3.89□□□□□ -1.79
UBR3-204ENST00000430321 A0A1B0GVX0 72 aa3.89□□□□□ -1.79
UBR3-204ENST00000430321 Q6ZQT0 140 aa3.89□□□□□ -1.79
UBR3-204ENST00000430321 SPRR4Q96PI1 79 aa3.89□□□□□ -1.79
UBR3-204ENST00000430321 C15orf56Q8N910 161 aa3.89□□□□□ -1.79
UBR3-204ENST00000430321 HRES1P13985 223 aa3.88□□□□□ -1.79
UBR3-204ENST00000430321 A0A096LNJ9 63 aa3.88□□□□□ -1.79
UBR3-204ENST00000430321 HCFC1P51610 2035 aa3.88□□□□□ -1.79
UBR3-204ENST00000430321 IGLV7-46A0A075B6I9 117 aa3.87□□□□□ -1.79
UBR3-204ENST00000430321 C8orf17Q9NRJ1 99 aa3.87□□□□□ -1.79
UBR3-204ENST00000430321 TTC28Q96AY4 2481 aa3.87□□□□□ -1.79
UBR3-204ENST00000430321 A8MUN3 132 aa3.87□□□□□ -1.79
UBR3-204ENST00000430321 SMIM29Q86T20 159 aa3.86□□□□□ -1.79
UBR3-204ENST00000430321 C1orf195Q5TG92 126 aa3.86□□□□□ -1.79
UBR3-204ENST00000430321 FP248Q71RG6 208 aaPredicted RBP3.86□□□□□ -1.79
UBR3-204ENST00000430321 DOPEY2Q9Y3R5 2298 aa3.86□□□□□ -1.79
UBR3-204ENST00000430321 PLCE1Q9P212 2302 aa3.86□□□□□ -1.79
UBR3-204ENST00000430321 PLAC8Q9NZF1 115 aa3.85□□□□□ -1.79
UBR3-204ENST00000430321 LINC00846Q9NV44 126 aa3.84□□□□□ -1.79
UBR3-204ENST00000430321 PRR15Q8IV56 129 aa3.84□□□□□ -1.79
UBR3-204ENST00000430321 SERTAD4-AS1Q5TG53 156 aa3.84□□□□□ -1.8
UBR3-204ENST00000430321 GIG44P09565 113 aaPredicted RBP3.83□□□□□ -1.8
UBR3-204ENST00000430321 DEFB116Q30KQ4 102 aa3.83□□□□□ -1.8
UBR3-204ENST00000430321 IGFL1Q6UW32 110 aa3.83□□□□□ -1.8
UBR3-204ENST00000430321 ATRXP46100 2492 aa3.82□□□□□ -1.8
UBR3-204ENST00000430321 SMR3BP02814 79 aaPredicted RBP3.82□□□□□ -1.8
UBR3-204ENST00000430321 FAM104AQ969W3 186 aa3.82□□□□□ -1.8
UBR3-204ENST00000430321 Q9UF83 564 aa3.82□□□□□ -1.8
UBR3-204ENST00000430321 C9orf129Q5T035 196 aaKnown RBP3.81□□□□□ -1.8
UBR3-204ENST00000430321 LINC00310P59036 64 aa3.81□□□□□ -1.8
UBR3-204ENST00000430321 TNP2Q05952 138 aa3.81□□□□□ -1.8
UBR3-204ENST00000430321 OBSCN-AS1Q96MR7 158 aa3.81□□□□□ -1.8
UBR3-204ENST00000430321 DSCR10P59022 87 aa3.81□□□□□ -1.8
UBR3-204ENST00000430321 CYP4F30PQ9H0H9 118 aa3.81□□□□□ -1.8
UBR3-204ENST00000430321 PRR14LQ5THK1 2151 aa3.8□□□□□ -1.8
UBR3-204ENST00000430321 FAM168BA1KXE4 195 aa3.8□□□□□ -1.8
UBR3-204ENST00000430321 SOSTDC1Q6X4U4 206 aa3.8□□□□□ -1.8
UBR3-204ENST00000430321 AGRNO00468 2067 aa3.79□□□□□ -1.8
UBR3-204ENST00000430321 M0R2T5 61 aa3.79□□□□□ -1.8
UBR3-204ENST00000430321 PTPN13Q12923 2485 aa3.79□□□□□ -1.8
UBR3-204ENST00000430321 K7EQZ3 153 aa3.79□□□□□ -1.8
UBR3-204ENST00000430321 NCOR2Q9Y618 2525 aa3.78□□□□□ -1.8
UBR3-204ENST00000430321 TNCP24821 2201 aa3.78□□□□□ -1.8
UBR3-204ENST00000430321 UQCR11O14957 56 aa3.78□□□□□ -1.8
UBR3-204ENST00000430321 Q5VSD8 79 aa3.78□□□□□ -1.8
UBR3-204ENST00000430321 C9orf92A6NGG3 77 aa3.78□□□□□ -1.8
UBR3-204ENST00000430321 CRIPTQ9P021 101 aa3.77□□□□□ -1.81
UBR3-204ENST00000430321 HIVEP3Q5T1R4 2406 aa3.77□□□□□ -1.81
UBR3-204ENST00000430321 CACNA1AO00555 2505 aa3.77□□□□□ -1.81
UBR3-204ENST00000430321 A0A087WVE0 104 aa3.77□□□□□ -1.81
UBR3-204ENST00000430321 A0A1W2PNN7 141 aa3.77□□□□□ -1.81
UBR3-204ENST00000430321 LITAFQ99732 161 aa3.77□□□□□ -1.81
UBR3-204ENST00000430321 NOTCH2Q04721 2471 aa3.76□□□□□ -1.81
UBR3-204ENST00000430321 SPG11Q96JI7 2443 aa3.76□□□□□ -1.81
UBR3-204ENST00000430321 SORL1Q92673 2214 aa3.76□□□□□ -1.81
UBR3-204ENST00000430321 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
UBR3-204ENST00000430321 SPANXA2-OT1Q8N9U9 137 aa3.76□□□□□ -1.81
UBR3-204ENST00000430321 ABCA2Q9BZC7 2435 aa3.75□□□□□ -1.81
UBR3-204ENST00000430321 Q8N377 158 aa3.75□□□□□ -1.81
UBR3-204ENST00000430321 CSAG1Q6PB30 78 aa3.75□□□□□ -1.81
UBR3-204ENST00000430321 IGLV5-48A0A075B6I7 105 aa3.75□□□□□ -1.81
UBR3-204ENST00000430321 CCDC179H3BU77 68 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms