RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 RPL37AP8A6NKH3 93 aa8.71□□□□□ -1.02
CPNE4-201ENST00000429747 MUC7Q8TAX7 377 aa8.71□□□□□ -1.02
CPNE4-201ENST00000429747 CELA1Q9UNI1 258 aa8.71□□□□□ -1.02
CPNE4-201ENST00000429747 USP24Q9UPU5 2620 aa8.71□□□□□ -1.02
CPNE4-201ENST00000429747 FLNBO75369 2602 aaKnown RBP8.71□□□□□ -1.02
CPNE4-201ENST00000429747 TRAV7A0A075B6U4 112 aa8.71□□□□□ -1.02
CPNE4-201ENST00000429747 HRCT1Q6UXD1 115 aa8.7□□□□□ -1.02
CPNE4-201ENST00000429747 GIG44P09565 113 aaPredicted RBP8.7□□□□□ -1.02
CPNE4-201ENST00000429747 CRYGAP11844 174 aa8.7□□□□□ -1.02
CPNE4-201ENST00000429747 FAM19A3Q7Z5A8 133 aa8.7□□□□□ -1.02
CPNE4-201ENST00000429747 MPLKIPQ8TAP9 179 aa8.7□□□□□ -1.02
CPNE4-201ENST00000429747 X6R8D5 127 aa8.7□□□□□ -1.02
CPNE4-201ENST00000429747 ATRQ13535 2644 aa8.7□□□□□ -1.02
CPNE4-201ENST00000429747 LINC01561Q8N1V8 128 aa8.69□□□□□ -1.02
CPNE4-201ENST00000429747 HIGD2AQ9BW72 106 aa8.69□□□□□ -1.02
CPNE4-201ENST00000429747 WFDC10BQ8IUB3 73 aa8.69□□□□□ -1.02
CPNE4-201ENST00000429747 LINC01547P58512 204 aaPredicted RBP8.69□□□□□ -1.02
CPNE4-201ENST00000429747 EGFEM1PQ0D2K5 195 aa8.69□□□□□ -1.02
CPNE4-201ENST00000429747 C9orf129Q5T035 196 aaKnown RBP8.69□□□□□ -1.02
CPNE4-201ENST00000429747 GCN1Q92616 2671 aaKnown RBP8.68□□□□□ -1.02
CPNE4-201ENST00000429747 SVIPQ8NHG7 77 aa8.68□□□□□ -1.02
CPNE4-201ENST00000429747 ITPR1Q14643 2758 aa8.68□□□□□ -1.02
CPNE4-201ENST00000429747 IL17DQ8TAD2 202 aa8.68□□□□□ -1.02
CPNE4-201ENST00000429747 PLAC8L1A1L4L8 177 aa8.67□□□□□ -1.02
CPNE4-201ENST00000429747 Q6ZTC4 211 aa8.67□□□□□ -1.02
CPNE4-201ENST00000429747 NANOS2P60321 138 aaKnown RBP8.66□□□□□ -1.02
CPNE4-201ENST00000429747 CSNK1G2-AS1Q8NCQ2 148 aa8.66□□□□□ -1.02
CPNE4-201ENST00000429747 BRK1Q8WUW1 75 aa8.66□□□□□ -1.02
CPNE4-201ENST00000429747 LYPD5Q6UWN5 251 aa8.66□□□□□ -1.02
CPNE4-201ENST00000429747 CDK2AP2O75956 126 aa8.66□□□□□ -1.02
CPNE4-201ENST00000429747 TEX15Q9BXT5 2789 aa8.66□□□□□ -1.02
CPNE4-201ENST00000429747 Q6ZRU5 148 aa8.65□□□□□ -1.02
CPNE4-201ENST00000429747 NBEAL2Q6ZNJ1 2754 aa8.65□□□□□ -1.02
CPNE4-201ENST00000429747 A0A096LNI7 61 aa8.65□□□□□ -1.02
CPNE4-201ENST00000429747 Q8N9L7 120 aa8.65□□□□□ -1.02
CPNE4-201ENST00000429747 MP68P56378 58 aa8.64□□□□□ -1.03
CPNE4-201ENST00000429747 NDUFC2-KCTD14E9PQ53 114 aa8.64□□□□□ -1.03
CPNE4-201ENST00000429747 C6orf48Q9UBA6 75 aa8.63□□□□□ -1.03
CPNE4-201ENST00000429747 IGSF10Q6WRI0 2623 aa8.63□□□□□ -1.03
CPNE4-201ENST00000429747 A0A0J9YWU9 116 aa8.63□□□□□ -1.03
CPNE4-201ENST00000429747 SPATA3Q8NHX4 192 aa8.63□□□□□ -1.03
CPNE4-201ENST00000429747 LAMA5O15230 3695 aa8.63□□□□□ -1.03
CPNE4-201ENST00000429747 NDUFC1O43677 76 aa8.62□□□□□ -1.03
CPNE4-201ENST00000429747 C19orf73Q9NVV2 129 aa8.62□□□□□ -1.03
CPNE4-201ENST00000429747 LINC01600Q96MT4 127 aa8.62□□□□□ -1.03
CPNE4-201ENST00000429747 PRR4Q16378 134 aa8.61□□□□□ -1.03
CPNE4-201ENST00000429747 Q6ZQT0 140 aa8.61□□□□□ -1.03
CPNE4-201ENST00000429747 FAM30AQ9NZY2 134 aa8.61□□□□□ -1.03
CPNE4-201ENST00000429747 ASH1LQ9NR48 2969 aaKnown RBP8.61□□□□□ -1.03
CPNE4-201ENST00000429747 DHRS4-AS1Q9P1J3 65 aa8.61□□□□□ -1.03
CPNE4-201ENST00000429747 UBE2AP49459 152 aa8.6□□□□□ -1.03
CPNE4-201ENST00000429747 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.59□□□□□ -1.03
CPNE4-201ENST00000429747 SERP1Q9Y6X1 66 aa8.59□□□□□ -1.03
CPNE4-201ENST00000429747 KIAA0087Q14695 138 aa8.59□□□□□ -1.03
CPNE4-201ENST00000429747 NDUFS5O43920 106 aa8.58□□□□□ -1.04
CPNE4-201ENST00000429747 WFDC13Q8IUB5 93 aa8.58□□□□□ -1.04
CPNE4-201ENST00000429747 ZANQ9Y493 2812 aa8.58□□□□□ -1.04
CPNE4-201ENST00000429747 C1orf137Q5JT78 98 aa8.58□□□□□ -1.04
CPNE4-201ENST00000429747 RELNP78509 3460 aa8.58□□□□□ -1.04
CPNE4-201ENST00000429747 HRNRQ86YZ3 2850 aaPredicted RBP8.57□□□□□ -1.04
CPNE4-201ENST00000429747 SMIM26A0A096LP01 95 aa8.57□□□□□ -1.04
CPNE4-201ENST00000429747 A0A0U1RQV1 116 aa8.57□□□□□ -1.04
CPNE4-201ENST00000429747 PKIGQ9Y2B9 76 aa8.57□□□□□ -1.04
CPNE4-201ENST00000429747 TRAV10A0A0B4J240 114 aa8.57□□□□□ -1.04
CPNE4-201ENST00000429747 H0Y9J4 135 aa8.57□□□□□ -1.04
CPNE4-201ENST00000429747 TMEM254Q8TBM7 123 aa8.56□□□□□ -1.04
CPNE4-201ENST00000429747 CXCL6P80162 114 aa8.56□□□□□ -1.04
CPNE4-201ENST00000429747 LRCOL1A6NCL2 159 aa8.55□□□□□ -1.04
CPNE4-201ENST00000429747 C2orf48Q96LS8 159 aa8.55□□□□□ -1.04
CPNE4-201ENST00000429747 ATP5EP56381 51 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-201ENST00000429747 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
CPNE4-201ENST00000429747 Q8NAQ8 132 aa8.54□□□□□ -1.04
CPNE4-201ENST00000429747 NDUFB1O75438 58 aa8.54□□□□□ -1.04
CPNE4-201ENST00000429747 C4orf26Q17RF5 130 aa8.54□□□□□ -1.04
CPNE4-201ENST00000429747 LOC110117498A0A087WWA1 95 aa8.54□□□□□ -1.04
CPNE4-201ENST00000429747 ESRGQ1W209 222 aa8.53□□□□□ -1.04
CPNE4-201ENST00000429747 MGAM2Q2M2H8 2515 aa8.53□□□□□ -1.04
CPNE4-201ENST00000429747 PRYO14603 147 aa8.52□□□□□ -1.04
CPNE4-201ENST00000429747 IGLV6-57P01721 117 aa8.52□□□□□ -1.04
CPNE4-201ENST00000429747 ELOF1P60002 83 aaKnown RBP8.52□□□□□ -1.04
CPNE4-201ENST00000429747 HELZ2Q9BYK8 2649 aaKnown RBP8.52□□□□□ -1.05
CPNE4-201ENST00000429747 C7orf33Q8WU49 177 aa8.51□□□□□ -1.05
CPNE4-201ENST00000429747 TM2D3Q9BRN9 247 aa8.51□□□□□ -1.05
CPNE4-201ENST00000429747 UNC79Q9P2D8 2635 aa8.51□□□□□ -1.05
CPNE4-201ENST00000429747 DEFB116Q30KQ4 102 aa8.51□□□□□ -1.05
CPNE4-201ENST00000429747 KRTAP1-3Q8IUG1 177 aa8.5□□□□□ -1.05
CPNE4-201ENST00000429747 SMG1Q96Q15 3661 aaKnown RBP8.5□□□□□ -1.05
CPNE4-201ENST00000429747 LINC00612Q8N6U2 182 aa8.49□□□□□ -1.05
CPNE4-201ENST00000429747 SETXQ7Z333 2677 aaKnown RBP8.48□□□□□ -1.05
CPNE4-201ENST00000429747 TRBV7-6A0A0J9YX20 115 aa8.48□□□□□ -1.05
CPNE4-201ENST00000429747 VPREB1P12018 145 aa8.48□□□□□ -1.05
CPNE4-201ENST00000429747 M0R2N4 97 aa8.47□□□□□ -1.05
CPNE4-201ENST00000429747 B9D2Q9BPU9 175 aa8.47□□□□□ -1.05
CPNE4-201ENST00000429747 MAST4O15021 2626 aa8.47□□□□□ -1.05
CPNE4-201ENST00000429747 KRTAP10-3P60369 221 aa8.47□□□□□ -1.05
CPNE4-201ENST00000429747 UBR5O95071 2799 aaPredicted RBP8.47□□□□□ -1.05
CPNE4-201ENST00000429747 MRPL55Q7Z7F7 128 aaKnown RBP8.46□□□□□ -1.05
CPNE4-201ENST00000429747 GVQW2A0A096LPI5 108 aaPredicted RBP8.46□□□□□ -1.06
CPNE4-201ENST00000429747 OBSCN-AS1Q96MR7 158 aa8.46□□□□□ -1.06
CPNE4-201ENST00000429747 REG3GQ6UW15 175 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms