RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 TRACP01848 142 aa5.65□□□□□ -1.5
HPS4-205ENST00000429411 FHL2Q14192 279 aa5.65□□□□□ -1.5
HPS4-205ENST00000429411 DPH3Q96FX2 82 aa5.65□□□□□ -1.5
HPS4-205ENST00000429411 LINC01600Q96MT4 127 aa5.65□□□□□ -1.51
HPS4-205ENST00000429411 KLK12Q9UKR0 248 aa5.65□□□□□ -1.51
HPS4-205ENST00000429411 IGLV5-45A0A087WSX0 123 aa5.64□□□□□ -1.51
HPS4-205ENST00000429411 IMUPQ9GZP8 106 aa5.64□□□□□ -1.51
HPS4-205ENST00000429411 IGLV1-51P01701 117 aa5.64□□□□□ -1.51
HPS4-205ENST00000429411 PRO0255Q9UI72 69 aa5.64□□□□□ -1.51
HPS4-205ENST00000429411 PLAC8L1A1L4L8 177 aa5.64□□□□□ -1.51
HPS4-205ENST00000429411 A8MTW9 85 aa5.64□□□□□ -1.51
HPS4-205ENST00000429411 ORMDL1Q9P0S3 153 aa5.64□□□□□ -1.51
HPS4-205ENST00000429411 A0A087WVE0 104 aa5.63□□□□□ -1.51
HPS4-205ENST00000429411 GIG44P09565 113 aaPredicted RBP5.63□□□□□ -1.51
HPS4-205ENST00000429411 LINC00643Q86TS7 51 aa5.63□□□□□ -1.51
HPS4-205ENST00000429411 WFDC9Q8NEX5 89 aa5.63□□□□□ -1.51
HPS4-205ENST00000429411 ACYP1P07311 99 aa5.62□□□□□ -1.51
HPS4-205ENST00000429411 CHCHD10Q8WYQ3 142 aaPredicted RBP5.62□□□□□ -1.51
HPS4-205ENST00000429411 XAGE1AQ9HD64 81 aa5.62□□□□□ -1.51
HPS4-205ENST00000429411 RBM12B-AS1Q9P1G2 102 aa5.62□□□□□ -1.51
HPS4-205ENST00000429411 IGHV3OR16-9A0A0B4J2B5 98 aa5.62□□□□□ -1.51
HPS4-205ENST00000429411 IBA57-AS1B1ANH7 110 aa5.62□□□□□ -1.51
HPS4-205ENST00000429411 H0YGX0 51 aa5.62□□□□□ -1.51
HPS4-205ENST00000429411 RPL18AQ02543 176 aaKnown RBP5.62□□□□□ -1.51
HPS4-205ENST00000429411 ANK3Q12955 4377 aaKnown RBP5.62□□□□□ -1.51
HPS4-205ENST00000429411 STAB2Q8WWQ8 2551 aa5.62□□□□□ -1.51
HPS4-205ENST00000429411 IGKV2-28A0A075B6P5 120 aa5.62□□□□□ -1.51
HPS4-205ENST00000429411 IGKV2D-28P01615 120 aa5.62□□□□□ -1.51
HPS4-205ENST00000429411 HAMPP81172 84 aa5.62□□□□□ -1.51
HPS4-205ENST00000429411 REG3AQ06141 175 aa5.62□□□□□ -1.51
HPS4-205ENST00000429411 OVOL2Q9BRP0 275 aa5.62□□□□□ -1.51
HPS4-205ENST00000429411 C6orf99Q4VX62 202 aa5.61□□□□□ -1.51
HPS4-205ENST00000429411 A0A087WZ39 114 aa5.61□□□□□ -1.51
HPS4-205ENST00000429411 SMCR5Q8TEV8 140 aa5.61□□□□□ -1.51
HPS4-205ENST00000429411 RPL28P46779 137 aaKnown RBP5.61□□□□□ -1.51
HPS4-205ENST00000429411 SPAG11BQ08648 103 aa5.61□□□□□ -1.51
HPS4-205ENST00000429411 C9orf129Q5T035 196 aaKnown RBP5.61□□□□□ -1.51
HPS4-205ENST00000429411 C6orf223Q8N319 242 aa5.61□□□□□ -1.51
HPS4-205ENST00000429411 CRYGAP11844 174 aa5.6□□□□□ -1.51
HPS4-205ENST00000429411 CXCL5P42830 114 aa5.6□□□□□ -1.51
HPS4-205ENST00000429411 HIGD2BQ4VC39 106 aa5.6□□□□□ -1.51
HPS4-205ENST00000429411 FBN3Q75N90 2809 aa5.6□□□□□ -1.51
HPS4-205ENST00000429411 hADV29S1A0JD25 119 aa5.6□□□□□ -1.51
HPS4-205ENST00000429411 TMEM258P61165 79 aa5.59□□□□□ -1.51
HPS4-205ENST00000429411 UNQ6190/PRO20217Q6UXQ8 127 aa5.59□□□□□ -1.51
HPS4-205ENST00000429411 TRAV23DV6A0A075B6W5 121 aa5.59□□□□□ -1.51
HPS4-205ENST00000429411 IGHV4-28A0A0C4DH34 117 aa5.59□□□□□ -1.51
HPS4-205ENST00000429411 COX7CP15954 63 aa5.58□□□□□ -1.52
HPS4-205ENST00000429411 LINC00846Q9NV44 126 aa5.58□□□□□ -1.52
HPS4-205ENST00000429411 C8orf87E5RJ46 101 aa5.58□□□□□ -1.52
HPS4-205ENST00000429411 J3QL48 77 aa5.58□□□□□ -1.52
HPS4-205ENST00000429411 SPATA3Q8NHX4 192 aa5.58□□□□□ -1.52
HPS4-205ENST00000429411 KRTAP10-3P60369 221 aa5.57□□□□□ -1.52
HPS4-205ENST00000429411 PRYO14603 147 aa5.57□□□□□ -1.52
HPS4-205ENST00000429411 UBL5Q9BZL1 73 aa5.57□□□□□ -1.52
HPS4-205ENST00000429411 LYRM9A8MSI8 78 aa5.56□□□□□ -1.52
HPS4-205ENST00000429411 SPART-AS1P0CW21 52 aa5.56□□□□□ -1.52
HPS4-205ENST00000429411 SCXQ7RTU7 201 aa5.56□□□□□ -1.52
HPS4-205ENST00000429411 CSNK1G2-AS1Q8NCQ2 148 aa5.56□□□□□ -1.52
HPS4-205ENST00000429411 C19orf73Q9NVV2 129 aa5.56□□□□□ -1.52
HPS4-205ENST00000429411 CELA1Q9UNI1 258 aa5.56□□□□□ -1.52
HPS4-205ENST00000429411 C9orf66Q5T8R8 295 aa5.56□□□□□ -1.52
HPS4-205ENST00000429411 ENHOQ6UWT2 76 aa5.56□□□□□ -1.52
HPS4-205ENST00000429411 C10orf25Q5T742 122 aa5.55□□□□□ -1.52
HPS4-205ENST00000429411 Q8IZM0 81 aa5.55□□□□□ -1.52
HPS4-205ENST00000429411 DEFB105AQ8NG35 78 aa5.55□□□□□ -1.52
HPS4-205ENST00000429411 CAMK2N2Q96S95 79 aa5.55□□□□□ -1.52
HPS4-205ENST00000429411 Q6ZQY7 126 aa5.54□□□□□ -1.52
HPS4-205ENST00000429411 IGKV2D-24A0A075B6R9 120 aa5.54□□□□□ -1.52
HPS4-205ENST00000429411 X6R8D5 127 aa5.54□□□□□ -1.52
HPS4-205ENST00000429411 ATOX1O00244 68 aa5.54□□□□□ -1.52
HPS4-205ENST00000429411 TMEM256-PLSCR3K7ERE1 68 aa5.53□□□□□ -1.52
HPS4-205ENST00000429411 RBM3P98179 157 aaKnown RBP5.53□□□□□ -1.52
HPS4-205ENST00000429411 TENM3Q9P273 2699 aa5.53□□□□□ -1.52
HPS4-205ENST00000429411 Q8N814 137 aa5.53□□□□□ -1.52
HPS4-205ENST00000429411 FAM19A3Q7Z5A8 133 aa5.53□□□□□ -1.52
HPS4-205ENST00000429411 JMJD7-PLA2G4BH0Y9G9 81 aa5.52□□□□□ -1.53
HPS4-205ENST00000429411 C16orf95Q9H693 158 aa5.51□□□□□ -1.53
HPS4-205ENST00000429411 IGHV4-30-4P0DP06 118 aa5.51□□□□□ -1.53
HPS4-205ENST00000429411 C20orf197Q8N268 126 aa5.51□□□□□ -1.53
HPS4-205ENST00000429411 TRBV10-3A0A0K0K1G6 114 aa5.5□□□□□ -1.53
HPS4-205ENST00000429411 A0A1B0GUV1 79 aa5.5□□□□□ -1.53
HPS4-205ENST00000429411 UPK3BQ9BT76 320 aa5.5□□□□□ -1.53
HPS4-205ENST00000429411 PLA2G2DQ9UNK4 145 aa5.5□□□□□ -1.53
HPS4-205ENST00000429411 WFDC10BQ8IUB3 73 aa5.5□□□□□ -1.53
HPS4-205ENST00000429411 DIRC1Q969H9 104 aa5.5□□□□□ -1.53
HPS4-205ENST00000429411 MEGF8Q7Z7M0 2845 aa5.5□□□□□ -1.53
HPS4-205ENST00000429411 CCKP06307 115 aa5.49□□□□□ -1.53
HPS4-205ENST00000429411 NDUFC2-KCTD14E9PQ53 114 aa5.49□□□□□ -1.53
HPS4-205ENST00000429411 C22orf24Q9Y442 160 aa5.48□□□□□ -1.53
HPS4-205ENST00000429411 SMIM26A0A096LP01 95 aa5.48□□□□□ -1.53
HPS4-205ENST00000429411 KPRPQ5T749 579 aaPredicted RBP5.48□□□□□ -1.53
HPS4-205ENST00000429411 NKAPP1Q8N9T2 125 aa5.48□□□□□ -1.53
HPS4-205ENST00000429411 LELP1Q5T871 98 aa5.47□□□□□ -1.53
HPS4-205ENST00000429411 Q6JHZ5 121 aa5.47□□□□□ -1.53
HPS4-205ENST00000429411 MIFP14174 115 aa5.47□□□□□ -1.53
HPS4-205ENST00000429411 TENM2Q9NT68 2774 aa5.47□□□□□ -1.53
HPS4-205ENST00000429411 COX7BP24311 80 aa5.47□□□□□ -1.53
HPS4-205ENST00000429411 Q6ZTC4 211 aa5.47□□□□□ -1.53
HPS4-205ENST00000429411 MPLKIPQ8TAP9 179 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms