RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 NAA38Q9BRA0 125 aaKnown RBP5.83□□□□□ -1.48
HDAC1-202ENST00000428704 LRP1Q07954 4544 aaKnown RBP5.82□□□□□ -1.48
HDAC1-202ENST00000428704 TRBV20-1A0A075B6N2 111 aa5.82□□□□□ -1.48
HDAC1-202ENST00000428704 A0A087WZ39 114 aa5.82□□□□□ -1.48
HDAC1-202ENST00000428704 LINC00959A0A1B0GUT2 108 aa5.82□□□□□ -1.48
HDAC1-202ENST00000428704 APOMO95445 188 aa5.82□□□□□ -1.48
HDAC1-202ENST00000428704 TSPAN13O95857 204 aa5.82□□□□□ -1.48
HDAC1-202ENST00000428704 IGHV3-33P01772 117 aa5.82□□□□□ -1.48
HDAC1-202ENST00000428704 MRPL23Q16540 153 aaKnown RBP5.82□□□□□ -1.48
HDAC1-202ENST00000428704 COPS9Q8WXC6 57 aa5.82□□□□□ -1.48
HDAC1-202ENST00000428704 Q9H8V8 135 aa5.82□□□□□ -1.48
HDAC1-202ENST00000428704 FUSP35637 526 aaKnown RBP eCLIP5.81□□□□□ -1.48
HDAC1-202ENST00000428704 RBX1P62877 108 aa5.81□□□□□ -1.48
HDAC1-202ENST00000428704 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
HDAC1-202ENST00000428704 ICOSQ9Y6W8 199 aa5.81□□□□□ -1.48
HDAC1-202ENST00000428704 FAT3Q8TDW7 4589 aa5.81□□□□□ -1.48
HDAC1-202ENST00000428704 LRP2P98164 4655 aa5.8□□□□□ -1.48
HDAC1-202ENST00000428704 SS18Q15532 418 aa5.8□□□□□ -1.48
HDAC1-202ENST00000428704 LELP1Q5T871 98 aa5.8□□□□□ -1.48
HDAC1-202ENST00000428704 ERG28Q9UKR5 140 aa5.8□□□□□ -1.48
HDAC1-202ENST00000428704 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
HDAC1-202ENST00000428704 TRBV30A0A0K0K1B3 111 aa5.79□□□□□ -1.48
HDAC1-202ENST00000428704 PRSS2P07478 247 aa5.79□□□□□ -1.48
HDAC1-202ENST00000428704 HAMPP81172 84 aa5.79□□□□□ -1.48
HDAC1-202ENST00000428704 OCIAD2Q56VL3 154 aa5.79□□□□□ -1.48
HDAC1-202ENST00000428704 TTC32Q5I0X7 151 aa5.79□□□□□ -1.48
HDAC1-202ENST00000428704 LYPD5Q6UWN5 251 aa5.79□□□□□ -1.48
HDAC1-202ENST00000428704 COX7B2Q8TF08 81 aa5.79□□□□□ -1.48
HDAC1-202ENST00000428704 PRO0461Q9UI25 63 aa5.79□□□□□ -1.48
HDAC1-202ENST00000428704 TMEM262E9PQX1 116 aa5.78□□□□□ -1.48
HDAC1-202ENST00000428704 K7ERU9 68 aa5.78□□□□□ -1.48
HDAC1-202ENST00000428704 KRTAP10-1P60331 282 aa5.78□□□□□ -1.48
HDAC1-202ENST00000428704 LINC00308Q8TCZ7 52 aa5.78□□□□□ -1.48
HDAC1-202ENST00000428704 LINC01600Q96MT4 127 aa5.78□□□□□ -1.48
HDAC1-202ENST00000428704 IBA57-AS1B1ANH7 110 aa5.77□□□□□ -1.49
HDAC1-202ENST00000428704 H3BMG7 143 aa5.77□□□□□ -1.49
HDAC1-202ENST00000428704 M0QXV9 152 aa5.77□□□□□ -1.49
HDAC1-202ENST00000428704 CD164L2Q6UWJ8 174 aa5.77□□□□□ -1.49
HDAC1-202ENST00000428704 Q6ZRN7 208 aaPredicted RBP5.77□□□□□ -1.49
HDAC1-202ENST00000428704 WFDC10BQ8IUB3 73 aa5.77□□□□□ -1.49
HDAC1-202ENST00000428704 LOC107984156A0A0G2JMH3 177 aa5.76□□□□□ -1.49
HDAC1-202ENST00000428704 MEIG1Q5JSS6 88 aa5.76□□□□□ -1.49
HDAC1-202ENST00000428704 ARL17AQ8IVW1 177 aa5.76□□□□□ -1.49
HDAC1-202ENST00000428704 Q8IZM0 81 aa5.76□□□□□ -1.49
HDAC1-202ENST00000428704 PRR34Q9NV39 138 aa5.76□□□□□ -1.49
HDAC1-202ENST00000428704 TCL1BO95988 128 aa5.75□□□□□ -1.49
HDAC1-202ENST00000428704 REG3AQ06141 175 aa5.75□□□□□ -1.49
HDAC1-202ENST00000428704 WFDC2Q14508 124 aa5.75□□□□□ -1.49
HDAC1-202ENST00000428704 COX6CP09669 75 aa5.74□□□□□ -1.49
HDAC1-202ENST00000428704 DNAH10OSP0CZ25 163 aa5.74□□□□□ -1.49
HDAC1-202ENST00000428704 SCGB1C2P0DMR2 95 aa5.74□□□□□ -1.49
HDAC1-202ENST00000428704 CXCL5P42830 114 aa5.74□□□□□ -1.49
HDAC1-202ENST00000428704 PSMB2P49721 201 aa5.74□□□□□ -1.49
HDAC1-202ENST00000428704 SOSTDC1Q6X4U4 206 aa5.74□□□□□ -1.49
HDAC1-202ENST00000428704 C5orf38Q86SI9 138 aa5.74□□□□□ -1.49
HDAC1-202ENST00000428704 LINC00269Q8N2A0 174 aa5.74□□□□□ -1.49
HDAC1-202ENST00000428704 TRAV8-4A0A0B4J246 113 aa5.73□□□□□ -1.49
HDAC1-202ENST00000428704 IGKV3OR2-268A0A0C4DH90 116 aa5.73□□□□□ -1.49
HDAC1-202ENST00000428704 COX17Q14061 63 aa5.73□□□□□ -1.49
HDAC1-202ENST00000428704 KIAA0087Q14695 138 aa5.73□□□□□ -1.49
HDAC1-202ENST00000428704 C6orf226Q5I0X4 101 aa5.73□□□□□ -1.49
HDAC1-202ENST00000428704 CBY1Q9Y3M2 126 aa5.73□□□□□ -1.49
HDAC1-202ENST00000428704 DNAH8Q96JB1 4490 aa5.73□□□□□ -1.49
HDAC1-202ENST00000428704 TRAV13-2A0A0B4J235 113 aa5.72□□□□□ -1.49
HDAC1-202ENST00000428704 J3QR89 54 aa5.72□□□□□ -1.49
HDAC1-202ENST00000428704 COX7A2LO14548 114 aa5.72□□□□□ -1.49
HDAC1-202ENST00000428704 TRIAP1O43715 76 aa5.72□□□□□ -1.49
HDAC1-202ENST00000428704 OXTP01178 125 aa5.72□□□□□ -1.49
HDAC1-202ENST00000428704 ANGP03950 147 aaKnown RBP5.72□□□□□ -1.49
HDAC1-202ENST00000428704 XCL1P47992 114 aa5.72□□□□□ -1.49
HDAC1-202ENST00000428704 ATXN8Q156A1 80 aa5.72□□□□□ -1.49
HDAC1-202ENST00000428704 DAND5Q8N907 189 aa5.72□□□□□ -1.49
HDAC1-202ENST00000428704 CHCHD10Q8WYQ3 142 aaPredicted RBP5.72□□□□□ -1.49
HDAC1-202ENST00000428704 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
HDAC1-202ENST00000428704 TOMM7Q9P0U1 55 aa5.72□□□□□ -1.49
HDAC1-202ENST00000428704 FOXI1Q12951 378 aa5.71□□□□□ -1.5
HDAC1-202ENST00000428704 Q1RN00 199 aa5.71□□□□□ -1.5
HDAC1-202ENST00000428704 MIR7-3HGQ8N6C7 128 aa5.71□□□□□ -1.5
HDAC1-202ENST00000428704 RPL13AP40429 203 aaKnown RBP5.7□□□□□ -1.5
HDAC1-202ENST00000428704 LINC00158P58513 81 aa5.7□□□□□ -1.5
HDAC1-202ENST00000428704 NPC2P61916 151 aa5.7□□□□□ -1.5
HDAC1-202ENST00000428704 ETDBQ3ZM63 59 aa5.7□□□□□ -1.5
HDAC1-202ENST00000428704 LINC01620Q4KN68 170 aa5.7□□□□□ -1.5
HDAC1-202ENST00000428704 LINC01556Q5JQF7 62 aa5.7□□□□□ -1.5
HDAC1-202ENST00000428704 ENHOQ6UWT2 76 aa5.7□□□□□ -1.5
HDAC1-202ENST00000428704 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
HDAC1-202ENST00000428704 TRBV10-2A0A0K0K1G8 114 aa5.69□□□□□ -1.5
HDAC1-202ENST00000428704 A0A0U1RRA0 63 aa5.69□□□□□ -1.5
HDAC1-202ENST00000428704 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
HDAC1-202ENST00000428704 H7C2G1 150 aa5.69□□□□□ -1.5
HDAC1-202ENST00000428704 LST1O00453 97 aa5.69□□□□□ -1.5
HDAC1-202ENST00000428704 RPL28P46779 137 aaKnown RBP5.69□□□□□ -1.5
HDAC1-202ENST00000428704 CKS1BP61024 79 aa5.69□□□□□ -1.5
HDAC1-202ENST00000428704 TEN1Q86WV5 123 aa5.69□□□□□ -1.5
HDAC1-202ENST00000428704 SND1-IT1Q9HBX3 110 aa5.69□□□□□ -1.5
HDAC1-202ENST00000428704 H3BT86 120 aa5.68□□□□□ -1.5
HDAC1-202ENST00000428704 SLC25A20O43772 301 aa5.68□□□□□ -1.5
HDAC1-202ENST00000428704 NDUFC2O95298 119 aa5.68□□□□□ -1.5
HDAC1-202ENST00000428704 MALP21145 153 aa5.68□□□□□ -1.5
HDAC1-202ENST00000428704 CFAP161Q6P656 301 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms