RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 NRXN3Q9Y4C0 1643 aa-0.25□□□□□ -2.45
GCFC2-203ENST00000427862 CROCC2H7BZ55 1655 aa-0.25□□□□□ -2.45
GCFC2-203ENST00000427862 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.25□□□□□ -2.45
GCFC2-203ENST00000427862 MARF1Q9Y4F3 1742 aaKnown RBP-0.25□□□□□ -2.45
GCFC2-203ENST00000427862 ZNF236Q9UL36 1845 aa-0.25□□□□□ -2.45
GCFC2-203ENST00000427862 PLCE1Q9P212 2302 aa-0.25□□□□□ -2.45
GCFC2-203ENST00000427862 BOD1L1Q8NFC6 3051 aa-0.25□□□□□ -2.45
GCFC2-203ENST00000427862 SPEGQ15772 3267 aa-0.25□□□□□ -2.45
GCFC2-203ENST00000427862 SZT2Q5T011 3432 aa-0.25□□□□□ -2.45
GCFC2-203ENST00000427862 SPENQ96T58 3664 aaKnown RBP-0.25□□□□□ -2.45
GCFC2-203ENST00000427862 DNAH7Q8WXX0 4024 aa-0.25□□□□□ -2.45
GCFC2-203ENST00000427862 DNAH3Q8TD57 4116 aa-0.25□□□□□ -2.45
GCFC2-203ENST00000427862 DNAH1Q9P2D7 4330 aa-0.25□□□□□ -2.45
GCFC2-203ENST00000427862 DNAH2Q9P225 4427 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 PRKDCP78527 4128 aaKnown RBP-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 LOC400499M0QZD8 3231 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 REV3LO60673 3130 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 BPTFQ12830 3046 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 TRANK1O15050 2925 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 CEP290O15078 2479 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 SPTA1P02549 2419 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 CEP250Q9BV73 2442 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 KIAA0556O60303 1618 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 MAST1Q9Y2H9 1570 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 MAGI3Q5TCQ9 1506 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 ZFYVE16Q7Z3T8 1539 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 LRRC7Q96NW7 1537 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 MED14O60244 1454 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 ATP7BP35670 1465 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 NCOA2Q15596 1464 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 MLH3Q9UHC1 1453 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 NAIPQ13075 1403 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 EEA1Q15075 1411 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 VPS8Q8N3P4 1428 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 NSD3Q9BZ95 1437 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 AKAP9Q99996 3911 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 TRRAPQ9Y4A5 3859 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 F8VRH5 84 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 I3L2K1 104 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 HTN1P15515 57 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 DEFB133Q30KQ1 61 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 RPS27LQ71UM5 84 aaKnown RBP-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 C6orf201Q7Z4U5 140 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 USMG5Q96IX5 58 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 FAM107BQ9H098 131 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 CDC42SE2Q9NRR3 84 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 CDKN2A-AS1Q9UH64 79 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 MUC3AQ02505 3323 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 EP400Q96L91 3159 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 UNC80Q8N2C7 3258 aa-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 APOBP04114 4563 aaKnown RBP-0.26□□□□□ -2.45
GCFC2-203ENST00000427862 C5orf42Q9H799 3197 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 ATMQ13315 3056 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 FRYQ5TBA9 3013 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 POLR1AO95602 1720 aaPredicted RBP-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 NWD2Q9ULI1 1742 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 ZNF831Q5JPB2 1677 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 ZC3H13Q5T200 1668 aaKnown RBP-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 SHROOM2Q13796 1616 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 PREX2Q70Z35 1606 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 USP32Q8NFA0 1604 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 ERCC6L2Q5T890 1561 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 DNMBPQ6XZF7 1577 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 HMGXB3Q12766 1538 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 CLASP1Q7Z460 1538 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 GAPVD1Q14C86 1478 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 SHANK2Q9UPX8 1470 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 ANK3Q12955 4377 aaKnown RBP-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 DNAH6Q9C0G6 4158 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 CEP350Q5VT06 3117 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 A0A096LNI7 61 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 I3L3M4 83 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 M0QY20 66 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 NDUFC1O43677 76 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 MGPP08493 103 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 DEFB130BP0DP73 79 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 DEFB130AP0DP74 79 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 RPS27P42677 84 aaKnown RBP-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 UBE2L3P68036 154 aaKnown RBP-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 LINC01556Q5JQF7 62 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 TMEM170BQ5T4T1 132 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 NDUFA4L2Q9NRX3 87 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 HIGD1BQ9P298 99 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 DNAH11Q96DT5 4516 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 DOCK1Q14185 1865 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 CMYA5Q8N3K9 4069 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 PLXNB2O15031 1838 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 SBF2Q86WG5 1849 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 UBR1Q8IWV7 1749 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 CRYBG1Q9Y4K1 1723 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 PRUNE2Q8WUY3 3088 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 VPS13DQ5THJ4 4388 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 CUL7Q14999 1698 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 QRICH2Q9H0J4 1663 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 CRYBG3Q68DQ2 2970 aa-0.27□□□□□ -2.45
GCFC2-203ENST00000427862 TMEM131LA2VDJ0 1609 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms