RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 DEFB109BQ30KR1 87 aa0.17□□□□□ -2.38
ATG4C-204ENST00000414558 OTOGQ6ZRI0 2925 aa0.17□□□□□ -2.38
ATG4C-204ENST00000414558 PSENENQ9NZ42 101 aa0.17□□□□□ -2.38
ATG4C-204ENST00000414558 HIGD1BQ9P298 99 aa0.17□□□□□ -2.38
ATG4C-204ENST00000414558 UBE2D4Q9Y2X8 147 aa0.17□□□□□ -2.38
ATG4C-204ENST00000414558 U3KQA8 63 aa0.17□□□□□ -2.38
ATG4C-204ENST00000414558 FSIP2Q5CZC0 6907 aa0.17□□□□□ -2.38
ATG4C-204ENST00000414558 LRP1Q07954 4544 aaKnown RBP0.17□□□□□ -2.38
ATG4C-204ENST00000414558 PREX1Q8TCU6 1659 aa0.17□□□□□ -2.38
ATG4C-204ENST00000414558 SLIT1O75093 1534 aa0.17□□□□□ -2.38
ATG4C-204ENST00000414558 DCAF1Q9Y4B6 1507 aa0.17□□□□□ -2.38
ATG4C-204ENST00000414558 RGPD8O14715 1765 aaPredicted RBP0.17□□□□□ -2.38
ATG4C-204ENST00000414558 RGPD5Q99666 1765 aa0.17□□□□□ -2.38
ATG4C-204ENST00000414558 SCN11AQ9UI33 1791 aa0.17□□□□□ -2.38
ATG4C-204ENST00000414558 UNC79Q9P2D8 2635 aa0.17□□□□□ -2.38
ATG4C-204ENST00000414558 NKTRP30414 1462 aaKnown RBP0.16□□□□□ -2.38
ATG4C-204ENST00000414558 NCOR1O75376 2440 aa0.16□□□□□ -2.38
ATG4C-204ENST00000414558 PKDREJQ9NTG1 2253 aa0.16□□□□□ -2.38
ATG4C-204ENST00000414558 CYB5AP00167 134 aa0.16□□□□□ -2.38
ATG4C-204ENST00000414558 SPRR1AP35321 89 aa0.16□□□□□ -2.38
ATG4C-204ENST00000414558 SNRPFP62306 86 aaKnown RBP0.16□□□□□ -2.38
ATG4C-204ENST00000414558 PLGLAQ15195 96 aa0.16□□□□□ -2.38
ATG4C-204ENST00000414558 NMSQ5H8A3 153 aa0.16□□□□□ -2.38
ATG4C-204ENST00000414558 S100A16Q96FQ6 103 aaKnown RBP0.16□□□□□ -2.38
ATG4C-204ENST00000414558 PTPRQQ9UMZ3 2332 aa0.16□□□□□ -2.38
ATG4C-204ENST00000414558 NEXMIFQ5QGS0 1516 aa0.16□□□□□ -2.38
ATG4C-204ENST00000414558 LRRC7Q96NW7 1537 aa0.16□□□□□ -2.38
ATG4C-204ENST00000414558 NCOR2Q9Y618 2525 aa0.16□□□□□ -2.38
ATG4C-204ENST00000414558 SPTBN1Q01082 2364 aaKnown RBP0.16□□□□□ -2.38
ATG4C-204ENST00000414558 DIP2BQ9P265 1576 aa0.15□□□□□ -2.38
ATG4C-204ENST00000414558 FAT4Q6V0I7 4981 aa0.15□□□□□ -2.38
ATG4C-204ENST00000414558 VWFP04275 2813 aa0.15□□□□□ -2.38
ATG4C-204ENST00000414558 SYNE1Q8NF91 8797 aaKnown RBP0.15□□□□□ -2.39
ATG4C-204ENST00000414558 HUWE1Q7Z6Z7 4374 aaKnown RBP0.15□□□□□ -2.39
ATG4C-204ENST00000414558 MAGI3Q5TCQ9 1506 aa0.15□□□□□ -2.39
ATG4C-204ENST00000414558 KDM5DQ9BY66 1539 aa0.15□□□□□ -2.39
ATG4C-204ENST00000414558 ACYP1P07311 99 aa0.15□□□□□ -2.39
ATG4C-204ENST00000414558 SPRR1BP22528 89 aa0.15□□□□□ -2.39
ATG4C-204ENST00000414558 LINC00643Q86TS7 51 aa0.15□□□□□ -2.39
ATG4C-204ENST00000414558 PIK3C2BO00750 1634 aa0.15□□□□□ -2.39
ATG4C-204ENST00000414558 PTPN23Q9H3S7 1636 aa0.15□□□□□ -2.39
ATG4C-204ENST00000414558 AKAP6Q13023 2319 aa0.15□□□□□ -2.39
ATG4C-204ENST00000414558 IGSF10Q6WRI0 2623 aa0.15□□□□□ -2.39
ATG4C-204ENST00000414558 CFAP74Q9C0B2 1584 aa0.15□□□□□ -2.39
ATG4C-204ENST00000414558 WNK2Q9Y3S1 2297 aa0.15□□□□□ -2.39
ATG4C-204ENST00000414558 CEP170BQ9Y4F5 1589 aaPredicted RBP0.15□□□□□ -2.39
ATG4C-204ENST00000414558 CFAP43Q8NDM7 1665 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 URB2Q14146 1524 aaKnown RBP0.14□□□□□ -2.39
ATG4C-204ENST00000414558 GVINP1Q7Z2Y8 2422 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 NESP48681 1621 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 SPTY2D1-AS1A0A0U1RR47 76 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 MYMXA0A1B0GTQ4 84 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 A0A1B0GUT8 65 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 KANTRA0A1W2PQU2 76 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 IQCF6A8MYZ5 107 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 I3L3M4 83 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 CCL22O00626 93 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 SPINK4O60575 86 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 IGLC2P0DOY2 106 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 IGLC3P0DOY3 106 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 CRIPTQ9P021 101 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 ARHGAP35Q9NRY4 1499 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 TNRC6CQ9HCJ0 1690 aaKnown RBP0.14□□□□□ -2.39
ATG4C-204ENST00000414558 ARFGEF2Q9Y6D5 1785 aa0.14□□□□□ -2.39
ATG4C-204ENST00000414558 KMT2AQ03164 3969 aa0.13□□□□□ -2.39
ATG4C-204ENST00000414558 CLIP1P30622 1438 aa0.13□□□□□ -2.39
ATG4C-204ENST00000414558 PTPN13Q12923 2485 aa0.13□□□□□ -2.39
ATG4C-204ENST00000414558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.13□□□□□ -2.39
ATG4C-204ENST00000414558 TENM4Q6N022 2769 aa0.13□□□□□ -2.39
ATG4C-204ENST00000414558 HIVEP3Q5T1R4 2406 aa0.13□□□□□ -2.39
ATG4C-204ENST00000414558 CHD6Q8TD26 2715 aa0.13□□□□□ -2.39
ATG4C-204ENST00000414558 RPL38P63173 70 aaKnown RBP0.13□□□□□ -2.39
ATG4C-204ENST00000414558 DEFB112Q30KQ8 113 aa0.13□□□□□ -2.39
ATG4C-204ENST00000414558 DEFB105AQ8NG35 78 aa0.13□□□□□ -2.39
ATG4C-204ENST00000414558 CCDC88BA6NC98 1476 aa0.13□□□□□ -2.39
ATG4C-204ENST00000414558 ERVK-7P63135 1459 aa0.13□□□□□ -2.39
ATG4C-204ENST00000414558 NWD1Q149M9 1564 aa0.13□□□□□ -2.39
ATG4C-204ENST00000414558 HRNRQ86YZ3 2850 aaPredicted RBP0.13□□□□□ -2.39
ATG4C-204ENST00000414558 DOT1LQ8TEK3 1739 aa0.13□□□□□ -2.39
ATG4C-204ENST00000414558 ABCC1P33527 1531 aa0.13□□□□□ -2.39
ATG4C-204ENST00000414558 UBR5O95071 2799 aaPredicted RBP0.12□□□□□ -2.39
ATG4C-204ENST00000414558 PRKDCP78527 4128 aaKnown RBP0.12□□□□□ -2.39
ATG4C-204ENST00000414558 ZNF831Q5JPB2 1677 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 MYCBP2O75592 4640 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 FAT2Q9NYQ8 4349 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 CPSF4LA6NMK7 179 aaKnown RBP0.12□□□□□ -2.39
ATG4C-204ENST00000414558 CEBPZOSA8MTT3 80 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 NDUFB1O75438 58 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 COX7BP24311 80 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 S100A13Q99584 98 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 MRPL34Q9BQ48 92 aaKnown RBP0.12□□□□□ -2.39
ATG4C-204ENST00000414558 FXYD6Q9H0Q3 95 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 C4AP0C0L4 1744 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 C4BP0C0L5 1744 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 USP32Q8NFA0 1604 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 PKD1L1Q8TDX9 2849 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 SPTA1P02549 2419 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 ABCA2Q9BZC7 2435 aa0.12□□□□□ -2.39
ATG4C-204ENST00000414558 PLCH1Q4KWH8 1693 aa0.11□□□□□ -2.39
ATG4C-204ENST00000414558 DDX60LQ5H9U9 1706 aaKnown RBP0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms