RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 ZNF720Q7Z2F6 126 aa-0.22□□□□□ -2.44
RNU2-28P-201ENST00000410457 FLNBO75369 2602 aaKnown RBP-0.23□□□□□ -2.45
RNU2-28P-201ENST00000410457 ALMS1Q8TCU4 4167 aa-0.23□□□□□ -2.45
RNU2-28P-201ENST00000410457 KIAA1551Q9HCM1 1747 aa-0.23□□□□□ -2.45
RNU2-28P-201ENST00000410457 LOC730098B7Z3J9 87 aa-0.23□□□□□ -2.45
RNU2-28P-201ENST00000410457 PKIAP61925 76 aa-0.23□□□□□ -2.45
RNU2-28P-201ENST00000410457 SNHG12Q9BXW3 62 aa-0.23□□□□□ -2.45
RNU2-28P-201ENST00000410457 CLTCQ00610 1675 aaKnown RBP-0.24□□□□□ -2.45
RNU2-28P-201ENST00000410457 MON2Q7Z3U7 1717 aa-0.24□□□□□ -2.45
RNU2-28P-201ENST00000410457 I3L3M4 83 aa-0.24□□□□□ -2.45
RNU2-28P-201ENST00000410457 PSENENQ9NZ42 101 aa-0.24□□□□□ -2.45
RNU2-28P-201ENST00000410457 APLNQ9ULZ1 77 aa-0.24□□□□□ -2.45
RNU2-28P-201ENST00000410457 FANCAO15360 1455 aa-0.24□□□□□ -2.45
RNU2-28P-201ENST00000410457 IQSEC2Q5JU85 1478 aa-0.24□□□□□ -2.45
RNU2-28P-201ENST00000410457 ANKRD26Q9UPS8 1709 aa-0.24□□□□□ -2.45
RNU2-28P-201ENST00000410457 LRP2P98164 4655 aa-0.25□□□□□ -2.45
RNU2-28P-201ENST00000410457 HECTD4Q9Y4D8 3996 aa-0.25□□□□□ -2.45
RNU2-28P-201ENST00000410457 F8WEM9 126 aa-0.25□□□□□ -2.45
RNU2-28P-201ENST00000410457 CUX1P39880 1505 aa-0.25□□□□□ -2.45
RNU2-28P-201ENST00000410457 SAMD9Q5K651 1589 aa-0.25□□□□□ -2.45
RNU2-28P-201ENST00000410457 C5P01031 1676 aa-0.25□□□□□ -2.45
RNU2-28P-201ENST00000410457 CNOT1A5YKK6 2376 aaKnown RBP-0.26□□□□□ -2.45
RNU2-28P-201ENST00000410457 D6R8Y8 96 aa-0.26□□□□□ -2.45
RNU2-28P-201ENST00000410457 MUSTN1Q8IVN3 82 aa-0.26□□□□□ -2.45
RNU2-28P-201ENST00000410457 COL6A3P12111 3177 aa-0.26□□□□□ -2.45
RNU2-28P-201ENST00000410457 MYH4Q9Y623 1939 aa-0.26□□□□□ -2.45
RNU2-28P-201ENST00000410457 AKAP12Q02952 1782 aa-0.27□□□□□ -2.45
RNU2-28P-201ENST00000410457 LEPROTL1O95214 131 aa-0.27□□□□□ -2.45
RNU2-28P-201ENST00000410457 GYPAP02724 150 aa-0.27□□□□□ -2.45
RNU2-28P-201ENST00000410457 SPRR2BP35325 72 aa-0.27□□□□□ -2.45
RNU2-28P-201ENST00000410457 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.27□□□□□ -2.45
RNU2-28P-201ENST00000410457 ATP10BO94823 1461 aa-0.29□□□□□ -2.46
RNU2-28P-201ENST00000410457 TROQ12816 1431 aaPredicted RBP-0.29□□□□□ -2.46
RNU2-28P-201ENST00000410457 HIGD1BQ9P298 99 aa-0.29□□□□□ -2.46
RNU2-28P-201ENST00000410457 CRYBG1Q9Y4K1 1723 aa-0.3□□□□□ -2.46
RNU2-28P-201ENST00000410457 CCNB3Q8WWL7 1395 aa-0.3□□□□□ -2.46
RNU2-28P-201ENST00000410457 M0R2T5 61 aa-0.3□□□□□ -2.46
RNU2-28P-201ENST00000410457 IGLC2P0DOY2 106 aa-0.3□□□□□ -2.46
RNU2-28P-201ENST00000410457 IGLC3P0DOY3 106 aa-0.3□□□□□ -2.46
RNU2-28P-201ENST00000410457 H1FX-AS1Q4G0G2 97 aa-0.3□□□□□ -2.46
RNU2-28P-201ENST00000410457 KIF20BQ96Q89 1820 aa-0.31□□□□□ -2.46
RNU2-28P-201ENST00000410457 MRPL34Q9BQ48 92 aaKnown RBP-0.31□□□□□ -2.46
RNU2-28P-201ENST00000410457 UBE2D4Q9Y2X8 147 aa-0.31□□□□□ -2.46
RNU2-28P-201ENST00000410457 PRKDCP78527 4128 aaKnown RBP-0.31□□□□□ -2.46
RNU2-28P-201ENST00000410457 DSTQ03001 7570 aaKnown RBP-0.31□□□□□ -2.46
RNU2-28P-201ENST00000410457 REV3LO60673 3130 aa-0.32□□□□□ -2.46
RNU2-28P-201ENST00000410457 SPTY2D1-AS1A0A0U1RR47 76 aa-0.32□□□□□ -2.46
RNU2-28P-201ENST00000410457 KNL1Q8NG31 2342 aa-0.33□□□□□ -2.46
RNU2-28P-201ENST00000410457 CCL22O00626 93 aa-0.33□□□□□ -2.46
RNU2-28P-201ENST00000410457 SMIM11AP58511 58 aa-0.33□□□□□ -2.46
RNU2-28P-201ENST00000410457 C20orf78Q9BR46 151 aa-0.33□□□□□ -2.46
RNU2-28P-201ENST00000410457 COL14A1Q05707 1796 aaKnown RBP-0.33□□□□□ -2.46
RNU2-28P-201ENST00000410457 STAB2Q8WWQ8 2551 aa-0.33□□□□□ -2.46
RNU2-28P-201ENST00000410457 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.33□□□□□ -2.46
RNU2-28P-201ENST00000410457 HMGN2P05204 90 aaKnown RBP-0.34□□□□□ -2.46
RNU2-28P-201ENST00000410457 CLIP1P30622 1438 aa-0.34□□□□□ -2.46
RNU2-28P-201ENST00000410457 PCNX1Q96RV3 2341 aa-0.35□□□□□ -2.46
RNU2-28P-201ENST00000410457 MAP1AP78559 2803 aaPredicted RBP-0.35□□□□□ -2.47
RNU2-28P-201ENST00000410457 CEP162Q5TB80 1403 aa-0.36□□□□□ -2.47
RNU2-28P-201ENST00000410457 DEFB112Q30KQ8 113 aa-0.36□□□□□ -2.47
RNU2-28P-201ENST00000410457 PKD1L3Q7Z443 1732 aa-0.37□□□□□ -2.47
RNU2-28P-201ENST00000410457 PEA15Q15121 130 aa-0.37□□□□□ -2.47
RNU2-28P-201ENST00000410457 KRTAP6-1Q3LI64 71 aa-0.37□□□□□ -2.47
RNU2-28P-201ENST00000410457 NMSQ5H8A3 153 aa-0.37□□□□□ -2.47
RNU2-28P-201ENST00000410457 SRRM2Q9UQ35 2752 aaKnown RBP-0.37□□□□□ -2.47
RNU2-28P-201ENST00000410457 MYO3AQ8NEV4 1616 aa-0.38□□□□□ -2.47
RNU2-28P-201ENST00000410457 PYY3Q5JQD4 70 aa-0.38□□□□□ -2.47
RNU2-28P-201ENST00000410457 ALKQ9UM73 1620 aa-0.38□□□□□ -2.47
RNU2-28P-201ENST00000410457 MAGI2Q86UL8 1455 aa-0.39□□□□□ -2.47
RNU2-28P-201ENST00000410457 Q9H521 79 aa-0.39□□□□□ -2.47
RNU2-28P-201ENST00000410457 CDKN2A-AS1Q9UH64 79 aa-0.39□□□□□ -2.47
RNU2-28P-201ENST00000410457 UBR3Q6ZT12 1888 aa-0.39□□□□□ -2.47
RNU2-28P-201ENST00000410457 BCORQ6W2J9 1755 aa-0.4□□□□□ -2.47
RNU2-28P-201ENST00000410457 RGPD4Q7Z3J3 1758 aa-0.4□□□□□ -2.47
RNU2-28P-201ENST00000410457 NBEAL1Q6ZS30 2694 aa-0.4□□□□□ -2.47
RNU2-28P-201ENST00000410457 QSER1Q2KHR3 1735 aa-0.4□□□□□ -2.47
RNU2-28P-201ENST00000410457 PLGLAQ15195 96 aa-0.4□□□□□ -2.47
RNU2-28P-201ENST00000410457 HEPN1Q6WQI6 88 aa-0.41□□□□□ -2.48
RNU2-28P-201ENST00000410457 C9orf62Q8N4C0 152 aa-0.41□□□□□ -2.48
RNU2-28P-201ENST00000410457 V9GYS6 101 aa-0.41□□□□□ -2.48
RNU2-28P-201ENST00000410457 UBR1Q8IWV7 1749 aa-0.41□□□□□ -2.48
RNU2-28P-201ENST00000410457 ATP7BP35670 1465 aa-0.41□□□□□ -2.48
RNU2-28P-201ENST00000410457 NEXMIFQ5QGS0 1516 aa-0.42□□□□□ -2.48
RNU2-28P-201ENST00000410457 A0A1B0GUT8 65 aa-0.42□□□□□ -2.48
RNU2-28P-201ENST00000410457 COX7BP24311 80 aa-0.42□□□□□ -2.48
RNU2-28P-201ENST00000410457 DEFB135Q30KP9 77 aa-0.42□□□□□ -2.48
RNU2-28P-201ENST00000410457 TTC37Q6PGP7 1564 aa-0.42□□□□□ -2.48
RNU2-28P-201ENST00000410457 LELP1Q5T871 98 aa-0.43□□□□□ -2.48
RNU2-28P-201ENST00000410457 RGPD3A6NKT7 1758 aaPredicted RBP-0.43□□□□□ -2.48
RNU2-28P-201ENST00000410457 RGPD2P0DJD1 1756 aa-0.44□□□□□ -2.48
RNU2-28P-201ENST00000410457 PDE4DIPQ5VU43 2346 aa-0.44□□□□□ -2.48
RNU2-28P-201ENST00000410457 NBASA2RRP1 2371 aa-0.44□□□□□ -2.48
RNU2-28P-201ENST00000410457 TRANK1O15050 2925 aa-0.44□□□□□ -2.48
RNU2-28P-201ENST00000410457 PLIN4Q96Q06 1357 aa-0.45□□□□□ -2.48
RNU2-28P-201ENST00000410457 PDZD2O15018 2839 aa-0.45□□□□□ -2.48
RNU2-28P-201ENST00000410457 IQCF6A8MYZ5 107 aa-0.45□□□□□ -2.48
RNU2-28P-201ENST00000410457 CYB5AP00167 134 aa-0.45□□□□□ -2.48
RNU2-28P-201ENST00000410457 ABCC3O15438 1527 aa-0.45□□□□□ -2.48
RNU2-28P-201ENST00000410457 MUC12Q9UKN1 5478 aa-0.46□□□□□ -2.48
RNU2-28P-201ENST00000410457 LRP1BQ9NZR2 4599 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms