RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 AKR1D1P51857 326 aa5.41□□□□□ -1.54
NIF3L1-203ENST00000409129 COX19Q49B96 90 aa5.41□□□□□ -1.54
NIF3L1-203ENST00000409129 PAPPA-AS1Q5QFB9 102 aa5.41□□□□□ -1.54
NIF3L1-203ENST00000409129 MRPL55Q7Z7F7 128 aaKnown RBP5.41□□□□□ -1.54
NIF3L1-203ENST00000409129 GEMIN7Q9H840 131 aaKnown RBP5.41□□□□□ -1.54
NIF3L1-203ENST00000409129 NXT2Q9NPJ8 142 aaKnown RBP5.41□□□□□ -1.54
NIF3L1-203ENST00000409129 TRAPPC1Q9Y5R8 145 aa5.41□□□□□ -1.54
NIF3L1-203ENST00000409129 A0A087X002 238 aa5.4□□□□□ -1.54
NIF3L1-203ENST00000409129 CXCL5P42830 114 aa5.4□□□□□ -1.54
NIF3L1-203ENST00000409129 YPEL4Q96NS1 127 aa5.4□□□□□ -1.54
NIF3L1-203ENST00000409129 TIMM17AQ99595 171 aa5.4□□□□□ -1.54
NIF3L1-203ENST00000409129 RPL37AP8A6NKH3 93 aa5.39□□□□□ -1.55
NIF3L1-203ENST00000409129 CRYGAP11844 174 aa5.39□□□□□ -1.55
NIF3L1-203ENST00000409129 FA2HQ7L5A8 372 aa5.39□□□□□ -1.55
NIF3L1-203ENST00000409129 TYMSOSQ8TAI1 123 aa5.39□□□□□ -1.55
NIF3L1-203ENST00000409129 TOMM6Q96B49 74 aa5.39□□□□□ -1.55
NIF3L1-203ENST00000409129 LINC00167Q96N53 147 aa5.39□□□□□ -1.55
NIF3L1-203ENST00000409129 KRTAP9-3Q9BYQ3 159 aa5.39□□□□□ -1.55
NIF3L1-203ENST00000409129 SMIM1B2RUZ4 78 aa5.38□□□□□ -1.55
NIF3L1-203ENST00000409129 ERASQ7Z444 233 aa5.38□□□□□ -1.55
NIF3L1-203ENST00000409129 C18orf32Q8TCD1 76 aa5.38□□□□□ -1.55
NIF3L1-203ENST00000409129 SMCO4Q9NRQ5 59 aa5.38□□□□□ -1.55
NIF3L1-203ENST00000409129 TINCRA0A1B0GVN0 87 aa5.37□□□□□ -1.55
NIF3L1-203ENST00000409129 PDZD11Q5EBL8 140 aa5.37□□□□□ -1.55
NIF3L1-203ENST00000409129 COX7B2Q8TF08 81 aa5.37□□□□□ -1.55
NIF3L1-203ENST00000409129 SCGB3A1Q96QR1 104 aa5.37□□□□□ -1.55
NIF3L1-203ENST00000409129 ANAPC11Q9NYG5 84 aa5.37□□□□□ -1.55
NIF3L1-203ENST00000409129 IGLV5-37A0A075B6J1 123 aa5.36□□□□□ -1.55
NIF3L1-203ENST00000409129 GAGE10A6NGK3 116 aa5.36□□□□□ -1.55
NIF3L1-203ENST00000409129 PCP4P48539 62 aa5.36□□□□□ -1.55
NIF3L1-203ENST00000409129 RAB5BP61020 215 aa5.36□□□□□ -1.55
NIF3L1-203ENST00000409129 PMCHL1Q16048 86 aa5.36□□□□□ -1.55
NIF3L1-203ENST00000409129 URB1-AS1Q96HZ7 61 aa5.36□□□□□ -1.55
NIF3L1-203ENST00000409129 IGLV5-45A0A087WSX0 123 aa5.35□□□□□ -1.55
NIF3L1-203ENST00000409129 UBE2AP49459 152 aa5.35□□□□□ -1.55
NIF3L1-203ENST00000409129 KRTAP13-2Q52LG2 175 aa5.35□□□□□ -1.55
NIF3L1-203ENST00000409129 KRTAP13-1Q8IUC0 172 aa5.35□□□□□ -1.55
NIF3L1-203ENST00000409129 NKAPP1Q8N9T2 125 aa5.35□□□□□ -1.55
NIF3L1-203ENST00000409129 CST9LQ9H4G1 147 aa5.35□□□□□ -1.55
NIF3L1-203ENST00000409129 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
NIF3L1-203ENST00000409129 A0A096LNJ9 63 aa5.34□□□□□ -1.55
NIF3L1-203ENST00000409129 LINC01546A6NGU7 62 aa5.34□□□□□ -1.55
NIF3L1-203ENST00000409129 LINC01549A6NIU2 74 aa5.34□□□□□ -1.55
NIF3L1-203ENST00000409129 TRGC2P03986 189 aa5.34□□□□□ -1.55
NIF3L1-203ENST00000409129 SPINK8P0C7L1 97 aa5.34□□□□□ -1.55
NIF3L1-203ENST00000409129 FAM229BQ4G0N7 80 aa5.34□□□□□ -1.55
NIF3L1-203ENST00000409129 LINC00614P0C842 121 aa5.33□□□□□ -1.56
NIF3L1-203ENST00000409129 PMVKQ15126 192 aa5.33□□□□□ -1.56
NIF3L1-203ENST00000409129 IGKV2-28A0A075B6P5 120 aa5.32□□□□□ -1.56
NIF3L1-203ENST00000409129 COLCA2A8K830 154 aa5.32□□□□□ -1.56
NIF3L1-203ENST00000409129 ATP5LO75964 103 aa5.32□□□□□ -1.56
NIF3L1-203ENST00000409129 IGKV2D-28P01615 120 aa5.32□□□□□ -1.56
NIF3L1-203ENST00000409129 HBDP02042 147 aa5.32□□□□□ -1.56
NIF3L1-203ENST00000409129 NDUFA6P56556 154 aa5.32□□□□□ -1.56
NIF3L1-203ENST00000409129 LINC00304Q8N9R0 145 aa5.32□□□□□ -1.56
NIF3L1-203ENST00000409129 RETNLBQ9BQ08 111 aa5.32□□□□□ -1.56
NIF3L1-203ENST00000409129 IGKV2D-26A0A0A0MRZ7 120 aa5.31□□□□□ -1.56
NIF3L1-203ENST00000409129 H3BRM9 83 aa5.31□□□□□ -1.56
NIF3L1-203ENST00000409129 PFN2P35080 140 aa5.31□□□□□ -1.56
NIF3L1-203ENST00000409129 CHTOPQ9Y3Y2 248 aaKnown RBP5.31□□□□□ -1.56
NIF3L1-203ENST00000409129 BAGE3Q86Y29 109 aa5.3□□□□□ -1.56
NIF3L1-203ENST00000409129 KRTAP9-8Q9BYQ0 159 aa5.3□□□□□ -1.56
NIF3L1-203ENST00000409129 TMEM126AQ9H061 195 aa5.3□□□□□ -1.56
NIF3L1-203ENST00000409129 IGLV7-46A0A075B6I9 117 aa5.29□□□□□ -1.56
NIF3L1-203ENST00000409129 IGLV5-39A0A0G2JS06 123 aa5.29□□□□□ -1.56
NIF3L1-203ENST00000409129 TMEM238C9JI98 176 aa5.29□□□□□ -1.56
NIF3L1-203ENST00000409129 IGLC3P0DOY3 106 aa5.29□□□□□ -1.56
NIF3L1-203ENST00000409129 VPREB1P12018 145 aa5.29□□□□□ -1.56
NIF3L1-203ENST00000409129 PRLHP81277 87 aa5.29□□□□□ -1.56
NIF3L1-203ENST00000409129 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
NIF3L1-203ENST00000409129 FAM19A1Q7Z5A9 133 aa5.29□□□□□ -1.56
NIF3L1-203ENST00000409129 FAM19A2Q8N3H0 131 aa5.29□□□□□ -1.56
NIF3L1-203ENST00000409129 SND1-IT1Q9HBX3 110 aa5.29□□□□□ -1.56
NIF3L1-203ENST00000409129 HSBP1O75506 76 aa5.28□□□□□ -1.56
NIF3L1-203ENST00000409129 SERF1AO75920 110 aa5.28□□□□□ -1.56
NIF3L1-203ENST00000409129 RPL24P83731 157 aaKnown RBP5.28□□□□□ -1.56
NIF3L1-203ENST00000409129 COX17Q14061 63 aa5.28□□□□□ -1.56
NIF3L1-203ENST00000409129 CHCHD1Q96BP2 118 aaKnown RBP5.28□□□□□ -1.56
NIF3L1-203ENST00000409129 PLEKHB2Q96CS7 222 aa5.28□□□□□ -1.56
NIF3L1-203ENST00000409129 ERG28Q9UKR5 140 aa5.28□□□□□ -1.56
NIF3L1-203ENST00000409129 A0A1B0GV90 55 aa5.27□□□□□ -1.57
NIF3L1-203ENST00000409129 H0Y8G0 127 aa5.27□□□□□ -1.57
NIF3L1-203ENST00000409129 M0R378 163 aa5.27□□□□□ -1.57
NIF3L1-203ENST00000409129 ZNF22P17026 224 aaPredicted RBP5.27□□□□□ -1.57
NIF3L1-203ENST00000409129 C3orf22Q8N5N4 141 aa5.26□□□□□ -1.57
NIF3L1-203ENST00000409129 Q8NDZ9 215 aa5.26□□□□□ -1.57
NIF3L1-203ENST00000409129 IFI27L1Q96BM0 104 aa5.26□□□□□ -1.57
NIF3L1-203ENST00000409129 ZNF625Q96I27 306 aaPredicted RBP5.26□□□□□ -1.57
NIF3L1-203ENST00000409129 C5orf52A6NGY3 159 aa5.25□□□□□ -1.57
NIF3L1-203ENST00000409129 C11orf86A6NJI1 115 aa5.25□□□□□ -1.57
NIF3L1-203ENST00000409129 FABP4P15090 132 aa5.25□□□□□ -1.57
NIF3L1-203ENST00000409129 SPAG11AQ6PDA7 123 aa5.25□□□□□ -1.57
NIF3L1-203ENST00000409129 PPDPFQ9H3Y8 114 aa5.25□□□□□ -1.57
NIF3L1-203ENST00000409129 HSBP1L1C9JCN9 74 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 HIST1H2BKO60814 126 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 HIST1H2BJP06899 126 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 HIST1H2BOP23527 126 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 HIST1H2BBP33778 126 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 HIST1H2BDP58876 126 aa5.24□□□□□ -1.57
NIF3L1-203ENST00000409129 HIST1H2BCP62807 126 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms