RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 USP9XQ93008 2570 aaPredicted RBP11.09□□□□□ -0.63
COL4A3BP-204ENST00000405807 CFAP46Q8IYW2 2715 aa11.09□□□□□ -0.63
COL4A3BP-204ENST00000405807 ANKRD17O75179 2603 aaKnown RBP11.09□□□□□ -0.63
COL4A3BP-204ENST00000405807 PHF5AQ7RTV0 110 aaKnown RBP11.08□□□□□ -0.63
COL4A3BP-204ENST00000405807 NOTCH3Q9UM47 2321 aa11.08□□□□□ -0.64
COL4A3BP-204ENST00000405807 PLA2G2AP14555 144 aa11.08□□□□□ -0.64
COL4A3BP-204ENST00000405807 CSNK1G2-AS1Q8NCQ2 148 aa11.08□□□□□ -0.64
COL4A3BP-204ENST00000405807 LINC00269Q8N2A0 174 aa11.08□□□□□ -0.64
COL4A3BP-204ENST00000405807 MYO18BQ8IUG5 2567 aa11.08□□□□□ -0.64
COL4A3BP-204ENST00000405807 NANOS2P60321 138 aaKnown RBP11.07□□□□□ -0.64
COL4A3BP-204ENST00000405807 C1orf64Q8NEQ6 169 aa11.07□□□□□ -0.64
COL4A3BP-204ENST00000405807 C16orf90A8MZG2 172 aa11.06□□□□□ -0.64
COL4A3BP-204ENST00000405807 WFDC10AQ9H1F0 79 aa11.06□□□□□ -0.64
COL4A3BP-204ENST00000405807 A0A1B0GUV1 79 aa11.06□□□□□ -0.64
COL4A3BP-204ENST00000405807 BPY2O14599 106 aa11.05□□□□□ -0.64
COL4A3BP-204ENST00000405807 CHD6Q8TD26 2715 aa11.05□□□□□ -0.64
COL4A3BP-204ENST00000405807 PRR3P79522 188 aaKnown RBP11.05□□□□□ -0.64
COL4A3BP-204ENST00000405807 WNK1Q9H4A3 2382 aa11.05□□□□□ -0.64
COL4A3BP-204ENST00000405807 FAM208BQ5VWN6 2430 aa11.04□□□□□ -0.64
COL4A3BP-204ENST00000405807 COX17Q14061 63 aa11.04□□□□□ -0.64
COL4A3BP-204ENST00000405807 CXCL6P80162 114 aa11.04□□□□□ -0.64
COL4A3BP-204ENST00000405807 CR1P17927 2039 aa11.03□□□□□ -0.64
COL4A3BP-204ENST00000405807 C19orf73Q9NVV2 129 aa11.03□□□□□ -0.64
COL4A3BP-204ENST00000405807 HIGD2AQ9BW72 106 aa11.03□□□□□ -0.64
COL4A3BP-204ENST00000405807 ESM1Q9NQ30 184 aa11.03□□□□□ -0.64
COL4A3BP-204ENST00000405807 DEFB130BP0DP73 79 aa11.02□□□□□ -0.65
COL4A3BP-204ENST00000405807 DEFB130AP0DP74 79 aa11.02□□□□□ -0.65
COL4A3BP-204ENST00000405807 RNASE1P07998 156 aaKnown RBP11.02□□□□□ -0.65
COL4A3BP-204ENST00000405807 GYPEP15421 78 aa11.02□□□□□ -0.65
COL4A3BP-204ENST00000405807 CD164L2Q6UWJ8 174 aa11.01□□□□□ -0.65
COL4A3BP-204ENST00000405807 DNAJC9-AS1A6NH13 148 aa11.01□□□□□ -0.65
COL4A3BP-204ENST00000405807 A6NN06 94 aa11.01□□□□□ -0.65
COL4A3BP-204ENST00000405807 PKD1L2Q7Z442 2459 aa11□□□□□ -0.65
COL4A3BP-204ENST00000405807 UBE2AP49459 152 aa11□□□□□ -0.65
COL4A3BP-204ENST00000405807 DEFB113Q30KQ7 82 aa11□□□□□ -0.65
COL4A3BP-204ENST00000405807 Q5VV11 94 aa11□□□□□ -0.65
COL4A3BP-204ENST00000405807 CLPSL2Q6UWE3 100 aa11□□□□□ -0.65
COL4A3BP-204ENST00000405807 ATP11AUNQ6ZP68 121 aa11□□□□□ -0.65
COL4A3BP-204ENST00000405807 IGLV1-51P01701 117 aa11□□□□□ -0.65
COL4A3BP-204ENST00000405807 ABCA12Q86UK0 2595 aa10.99□□□□□ -0.65
COL4A3BP-204ENST00000405807 LCA10Q71F78 164 aa10.99□□□□□ -0.65
COL4A3BP-204ENST00000405807 SCXQ7RTU7 201 aa10.99□□□□□ -0.65
COL4A3BP-204ENST00000405807 SPATA3Q8NHX4 192 aa10.99□□□□□ -0.65
COL4A3BP-204ENST00000405807 KIAA0087Q14695 138 aa10.99□□□□□ -0.65
COL4A3BP-204ENST00000405807 C6orf99Q4VX62 202 aa10.99□□□□□ -0.65
COL4A3BP-204ENST00000405807 DIRC1Q969H9 104 aa10.99□□□□□ -0.65
COL4A3BP-204ENST00000405807 NIPBLQ6KC79 2804 aaeCLIP10.99□□□□□ -0.65
COL4A3BP-204ENST00000405807 TEX15Q9BXT5 2789 aa10.99□□□□□ -0.65
COL4A3BP-204ENST00000405807 C7orf65Q6ZTY9 151 aa10.99□□□□□ -0.65
COL4A3BP-204ENST00000405807 ZNF843Q8N446 348 aa10.99□□□□□ -0.65
COL4A3BP-204ENST00000405807 FBN2P35556 2912 aa10.98□□□□□ -0.65
COL4A3BP-204ENST00000405807 CHKB-CPT1BH3BT56 60 aa10.98□□□□□ -0.65
COL4A3BP-204ENST00000405807 M0R2N4 97 aa10.98□□□□□ -0.65
COL4A3BP-204ENST00000405807 Q6ZQT0 140 aa10.98□□□□□ -0.65
COL4A3BP-204ENST00000405807 HCG22E2RYF7 251 aa10.98□□□□□ -0.65
COL4A3BP-204ENST00000405807 AKAP9Q99996 3911 aa10.97□□□□□ -0.65
COL4A3BP-204ENST00000405807 IGHV4-28A0A0C4DH34 117 aa10.97□□□□□ -0.65
COL4A3BP-204ENST00000405807 LINC00575Q6W349 94 aa10.97□□□□□ -0.65
COL4A3BP-204ENST00000405807 KRTAP10-9P60411 292 aa10.97□□□□□ -0.65
COL4A3BP-204ENST00000405807 PTPN13Q12923 2485 aa10.97□□□□□ -0.65
COL4A3BP-204ENST00000405807 LINC00612Q8N6U2 182 aa10.96□□□□□ -0.66
COL4A3BP-204ENST00000405807 ACACBO00763 2458 aa10.96□□□□□ -0.66
COL4A3BP-204ENST00000405807 NF1P21359 2839 aa10.95□□□□□ -0.66
COL4A3BP-204ENST00000405807 PRO0255Q9UI72 69 aa10.95□□□□□ -0.66
COL4A3BP-204ENST00000405807 PSCAO43653 123 aa10.94□□□□□ -0.66
COL4A3BP-204ENST00000405807 NBPF19A0A087WUL8 3843 aa10.94□□□□□ -0.66
COL4A3BP-204ENST00000405807 JMJD1CQ15652 2540 aa10.94□□□□□ -0.66
COL4A3BP-204ENST00000405807 LOC110117498A0A087WWA1 95 aa10.94□□□□□ -0.66
COL4A3BP-204ENST00000405807 CHCHD10Q8WYQ3 142 aaPredicted RBP10.94□□□□□ -0.66
COL4A3BP-204ENST00000405807 MDFIQ99750 246 aa10.94□□□□□ -0.66
COL4A3BP-204ENST00000405807 OCR1Q9BZK8 76 aa10.94□□□□□ -0.66
COL4A3BP-204ENST00000405807 SONP18583 2426 aaKnown RBP10.94□□□□□ -0.66
COL4A3BP-204ENST00000405807 VPREB1P12018 145 aa10.94□□□□□ -0.66
COL4A3BP-204ENST00000405807 C9orf116Q5BN46 136 aaPredicted RBP10.94□□□□□ -0.66
COL4A3BP-204ENST00000405807 LRRK2Q5S007 2527 aa10.93□□□□□ -0.66
COL4A3BP-204ENST00000405807 A0A096LPF7 62 aa10.93□□□□□ -0.66
COL4A3BP-204ENST00000405807 EPG5Q9HCE0 2579 aa10.92□□□□□ -0.66
COL4A3BP-204ENST00000405807 NAV2Q8IVL1 2488 aa10.92□□□□□ -0.66
COL4A3BP-204ENST00000405807 SETXQ7Z333 2677 aaKnown RBP10.91□□□□□ -0.66
COL4A3BP-204ENST00000405807 Q8NDZ9 215 aa10.91□□□□□ -0.66
COL4A3BP-204ENST00000405807 LINC01006Q8NI28 216 aa10.91□□□□□ -0.66
COL4A3BP-204ENST00000405807 MUC7Q8TAX7 377 aa10.9□□□□□ -0.66
COL4A3BP-204ENST00000405807 IGLV10-54A0A075B6I4 117 aa10.9□□□□□ -0.66
COL4A3BP-204ENST00000405807 ANGP03950 147 aaKnown RBP10.9□□□□□ -0.66
COL4A3BP-204ENST00000405807 H3BQ85 93 aa10.9□□□□□ -0.67
COL4A3BP-204ENST00000405807 REG3AQ06141 175 aa10.9□□□□□ -0.67
COL4A3BP-204ENST00000405807 PIEZO1Q92508 2521 aa10.89□□□□□ -0.67
COL4A3BP-204ENST00000405807 PDE6GP18545 87 aa10.89□□□□□ -0.67
COL4A3BP-204ENST00000405807 CCDC168Q8NDH2 2452 aa10.89□□□□□ -0.67
COL4A3BP-204ENST00000405807 NKAPP1Q8N9T2 125 aa10.89□□□□□ -0.67
COL4A3BP-204ENST00000405807 ZNF469Q96JG9 3925 aaPredicted RBP10.89□□□□□ -0.67
COL4A3BP-204ENST00000405807 IGSF10Q6WRI0 2623 aa10.87□□□□□ -0.67
COL4A3BP-204ENST00000405807 PRB2P02812 416 aaPredicted RBP10.87□□□□□ -0.67
COL4A3BP-204ENST00000405807 KRTAP1-3Q8IUG1 177 aa10.87□□□□□ -0.67
COL4A3BP-204ENST00000405807 IGLV6-57P01721 117 aa10.85□□□□□ -0.67
COL4A3BP-204ENST00000405807 UNQ6190/PRO20217Q6UXQ8 127 aa10.85□□□□□ -0.67
COL4A3BP-204ENST00000405807 X6R8D5 127 aa10.85□□□□□ -0.67
COL4A3BP-204ENST00000405807 C9orf66Q5T8R8 295 aa10.85□□□□□ -0.67
COL4A3BP-204ENST00000405807 Q6ZQY7 126 aa10.85□□□□□ -0.67
COL4A3BP-204ENST00000405807 SPAG11BQ08648 103 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 574.5 ms