RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC13-202ENST00000399438 LINC01547P58512 204 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC13-202ENST00000399438 POM121L12Q8N7R1 296 aa4.23□□□□□ -1.73
TRAPPC13-202ENST00000399438 NOP10Q9NPE3 64 aaKnown RBP4.23□□□□□ -1.73
TRAPPC13-202ENST00000399438 Q1RN00 199 aa4.22□□□□□ -1.73
TRAPPC13-202ENST00000399438 DEFB114Q30KQ6 69 aa4.22□□□□□ -1.73
TRAPPC13-202ENST00000399438 CAMK2N2Q96S95 79 aa4.22□□□□□ -1.73
TRAPPC13-202ENST00000399438 A0A0J9YY99 117 aa4.22□□□□□ -1.73
TRAPPC13-202ENST00000399438 FUSP35637 526 aaKnown RBP eCLIP4.22□□□□□ -1.73
TRAPPC13-202ENST00000399438 MGAM2Q2M2H8 2515 aa4.22□□□□□ -1.73
TRAPPC13-202ENST00000399438 ZNF22P17026 224 aaPredicted RBP4.21□□□□□ -1.73
TRAPPC13-202ENST00000399438 HIST1H4AP62805 103 aaKnown RBP4.21□□□□□ -1.73
TRAPPC13-202ENST00000399438 CFAP126Q5VTH2 177 aa4.21□□□□□ -1.73
TRAPPC13-202ENST00000399438 C20orf203Q8NBC4 194 aa4.21□□□□□ -1.73
TRAPPC13-202ENST00000399438 Q8NBF4 154 aa4.21□□□□□ -1.73
TRAPPC13-202ENST00000399438 TRAV12-1A0A0B4J245 112 aa4.21□□□□□ -1.74
TRAPPC13-202ENST00000399438 I3L3M4 83 aa4.21□□□□□ -1.74
TRAPPC13-202ENST00000399438 TIMM17BO60830 172 aa4.21□□□□□ -1.74
TRAPPC13-202ENST00000399438 UBE2AP49459 152 aa4.21□□□□□ -1.74
TRAPPC13-202ENST00000399438 NANOS2P60321 138 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-202ENST00000399438 CLPSL2Q6UWE3 100 aa4.21□□□□□ -1.74
TRAPPC13-202ENST00000399438 UPK3BQ9BT76 320 aa4.21□□□□□ -1.74
TRAPPC13-202ENST00000399438 C3orf84H3BNL1 204 aa4.21□□□□□ -1.74
TRAPPC13-202ENST00000399438 DEFB130BP0DP73 79 aa4.21□□□□□ -1.74
TRAPPC13-202ENST00000399438 DEFB130AP0DP74 79 aa4.21□□□□□ -1.74
TRAPPC13-202ENST00000399438 MUSTN1Q8IVN3 82 aa4.21□□□□□ -1.74
TRAPPC13-202ENST00000399438 TENM3Q9P273 2699 aa4.2□□□□□ -1.74
TRAPPC13-202ENST00000399438 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
TRAPPC13-202ENST00000399438 HIGD1BQ9P298 99 aa4.2□□□□□ -1.74
TRAPPC13-202ENST00000399438 A0A087X002 238 aa4.2□□□□□ -1.74
TRAPPC13-202ENST00000399438 hADV29S1A0JD25 119 aa4.2□□□□□ -1.74
TRAPPC13-202ENST00000399438 CFC1BP0CG36 223 aa4.2□□□□□ -1.74
TRAPPC13-202ENST00000399438 CFC1P0CG37 223 aa4.2□□□□□ -1.74
TRAPPC13-202ENST00000399438 COX6A2Q02221 97 aa4.2□□□□□ -1.74
TRAPPC13-202ENST00000399438 CDKN2A-AS1Q9UH64 79 aa4.2□□□□□ -1.74
TRAPPC13-202ENST00000399438 TRGV2A0A075B6R0 118 aa4.19□□□□□ -1.74
TRAPPC13-202ENST00000399438 IGHV3-30-3P0DP02 117 aa4.19□□□□□ -1.74
TRAPPC13-202ENST00000399438 LORP23490 312 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-202ENST00000399438 INSP01308 110 aa4.19□□□□□ -1.74
TRAPPC13-202ENST00000399438 CIRBPQ14011 172 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-202ENST00000399438 LINC01006Q8NI28 216 aa4.19□□□□□ -1.74
TRAPPC13-202ENST00000399438 AMELXQ99217 191 aa4.19□□□□□ -1.74
TRAPPC13-202ENST00000399438 C4orf3Q8WVX3 66 aa4.19□□□□□ -1.74
TRAPPC13-202ENST00000399438 TIMM21Q9BVV7 248 aa4.19□□□□□ -1.74
TRAPPC13-202ENST00000399438 TOMM7Q9P0U1 55 aa4.19□□□□□ -1.74
TRAPPC13-202ENST00000399438 PRO0461Q9UI25 63 aa4.19□□□□□ -1.74
TRAPPC13-202ENST00000399438 IGHV3-30P01768 117 aa4.18□□□□□ -1.74
TRAPPC13-202ENST00000399438 IGHV3-30-5P0DP03 117 aa4.18□□□□□ -1.74
TRAPPC13-202ENST00000399438 NDUFA11Q86Y39 141 aa4.18□□□□□ -1.74
TRAPPC13-202ENST00000399438 TMEM141Q96I45 108 aa4.18□□□□□ -1.74
TRAPPC13-202ENST00000399438 CHCHD7Q9BUK0 85 aa4.18□□□□□ -1.74
TRAPPC13-202ENST00000399438 TMEM223A0PJW6 202 aa4.18□□□□□ -1.74
TRAPPC13-202ENST00000399438 PPP1R17O96001 155 aa4.18□□□□□ -1.74
TRAPPC13-202ENST00000399438 PPDPFLQ8WWR9 84 aa4.18□□□□□ -1.74
TRAPPC13-202ENST00000399438 NDUFA12Q9UI09 145 aa4.18□□□□□ -1.74
TRAPPC13-202ENST00000399438 Q8N3U1 123 aa4.17□□□□□ -1.74
TRAPPC13-202ENST00000399438 CLEC2BQ92478 149 aa4.17□□□□□ -1.74
TRAPPC13-202ENST00000399438 ATP11AUNQ6ZP68 121 aa4.17□□□□□ -1.74
TRAPPC13-202ENST00000399438 C15orf53Q8NAA6 179 aa4.17□□□□□ -1.74
TRAPPC13-202ENST00000399438 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
TRAPPC13-202ENST00000399438 NTM-AS1Q6ZSK4 140 aa4.17□□□□□ -1.74
TRAPPC13-202ENST00000399438 XAGE1AQ9HD64 81 aa4.17□□□□□ -1.74
TRAPPC13-202ENST00000399438 TRBV6-5A0A0K0K1A5 114 aa4.16□□□□□ -1.74
TRAPPC13-202ENST00000399438 GIG44P09565 113 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC13-202ENST00000399438 HTN3P15516 51 aa4.16□□□□□ -1.74
TRAPPC13-202ENST00000399438 UBE2D4Q9Y2X8 147 aa4.16□□□□□ -1.74
TRAPPC13-202ENST00000399438 UBE2D1P51668 147 aa4.16□□□□□ -1.74
TRAPPC13-202ENST00000399438 KRTAP10-3P60369 221 aa4.16□□□□□ -1.74
TRAPPC13-202ENST00000399438 C5orf38Q86SI9 138 aa4.16□□□□□ -1.74
TRAPPC13-202ENST00000399438 IGLV1-50A0A075B6I6 118 aa4.16□□□□□ -1.74
TRAPPC13-202ENST00000399438 A0A1B0GVX0 72 aa4.15□□□□□ -1.74
TRAPPC13-202ENST00000399438 RHOHQ15669 191 aa4.15□□□□□ -1.74
TRAPPC13-202ENST00000399438 PRO1854Q9UHT4 67 aa4.15□□□□□ -1.74
TRAPPC13-202ENST00000399438 TRGV4A0A0C4DH28 118 aa4.15□□□□□ -1.75
TRAPPC13-202ENST00000399438 A8MWP4 228 aa4.15□□□□□ -1.75
TRAPPC13-202ENST00000399438 CAMK2N1Q7Z7J9 78 aa4.15□□□□□ -1.75
TRAPPC13-202ENST00000399438 ODF3Q96PU9 254 aa4.15□□□□□ -1.75
TRAPPC13-202ENST00000399438 IBA57-AS1B1ANH7 110 aa4.14□□□□□ -1.75
TRAPPC13-202ENST00000399438 IGLV4-60A0A075B6I1 120 aa4.14□□□□□ -1.75
TRAPPC13-202ENST00000399438 IGLV10-54A0A075B6I4 117 aa4.14□□□□□ -1.75
TRAPPC13-202ENST00000399438 C15orf56Q8N910 161 aa4.14□□□□□ -1.75
TRAPPC13-202ENST00000399438 DEFB135Q30KP9 77 aa4.14□□□□□ -1.75
TRAPPC13-202ENST00000399438 TEX49A0A1B0GTD5 131 aa4.13□□□□□ -1.75
TRAPPC13-202ENST00000399438 IGHV3-33P01772 117 aa4.13□□□□□ -1.75
TRAPPC13-202ENST00000399438 SMIM29Q86T20 159 aa4.13□□□□□ -1.75
TRAPPC13-202ENST00000399438 CSMD3Q7Z407 3707 aa4.13□□□□□ -1.75
TRAPPC13-202ENST00000399438 ATOX1O00244 68 aa4.13□□□□□ -1.75
TRAPPC13-202ENST00000399438 CCKP06307 115 aa4.13□□□□□ -1.75
TRAPPC13-202ENST00000399438 RPL36AP83881 106 aaKnown RBP4.13□□□□□ -1.75
TRAPPC13-202ENST00000399438 TMEM263Q8WUH6 116 aaKnown RBP4.13□□□□□ -1.75
TRAPPC13-202ENST00000399438 RPL36ALQ969Q0 106 aaKnown RBP4.13□□□□□ -1.75
TRAPPC13-202ENST00000399438 LITAFQ99732 161 aa4.13□□□□□ -1.75
TRAPPC13-202ENST00000399438 LINC00474Q9P2X8 69 aa4.13□□□□□ -1.75
TRAPPC13-202ENST00000399438 TLX1NBP0CAT3 122 aa4.12□□□□□ -1.75
TRAPPC13-202ENST00000399438 XCL1P47992 114 aa4.12□□□□□ -1.75
TRAPPC13-202ENST00000399438 ATP5EP56381 51 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC13-202ENST00000399438 Q8N1X5 172 aa4.12□□□□□ -1.75
TRAPPC13-202ENST00000399438 BPY2O14599 106 aa4.12□□□□□ -1.75
TRAPPC13-202ENST00000399438 SLC25A20O43772 301 aa4.12□□□□□ -1.75
TRAPPC13-202ENST00000399438 UBE2D3P61077 147 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 799.9 ms