RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 KMT2BQ9UMN6 2715 aaPredicted RBP0.68□□□□□ -2.3
HMGN2P39-201ENST00000398005 CD163L1Q9NR16 1453 aa0.68□□□□□ -2.3
HMGN2P39-201ENST00000398005 ABCA9Q8IUA7 1624 aa0.68□□□□□ -2.3
HMGN2P39-201ENST00000398005 I3L3M4 83 aa0.68□□□□□ -2.3
HMGN2P39-201ENST00000398005 SFTA3P0C7M3 94 aa0.68□□□□□ -2.3
HMGN2P39-201ENST00000398005 CDC42BPGQ6DT37 1551 aa0.68□□□□□ -2.3
HMGN2P39-201ENST00000398005 ANKRD50Q9ULJ7 1429 aa0.68□□□□□ -2.3
HMGN2P39-201ENST00000398005 UBR3Q6ZT12 1888 aa0.67□□□□□ -2.3
HMGN2P39-201ENST00000398005 HIVEP2P31629 2446 aa0.67□□□□□ -2.3
HMGN2P39-201ENST00000398005 POLR1AO95602 1720 aaPredicted RBP0.67□□□□□ -2.3
HMGN2P39-201ENST00000398005 ITSN1Q15811 1721 aa0.67□□□□□ -2.3
HMGN2P39-201ENST00000398005 TIAM2Q8IVF5 1701 aa0.67□□□□□ -2.3
HMGN2P39-201ENST00000398005 MYO7AQ13402 2215 aa0.67□□□□□ -2.3
HMGN2P39-201ENST00000398005 NDUFA4O00483 81 aa0.67□□□□□ -2.3
HMGN2P39-201ENST00000398005 C3orf79P0CE67 100 aa0.67□□□□□ -2.3
HMGN2P39-201ENST00000398005 HMGA1P17096 107 aaKnown RBP0.67□□□□□ -2.3
HMGN2P39-201ENST00000398005 DEFB123Q8N688 67 aa0.67□□□□□ -2.3
HMGN2P39-201ENST00000398005 CFAP43Q8NDM7 1665 aa0.67□□□□□ -2.3
HMGN2P39-201ENST00000398005 CCDC180Q9P1Z9 1646 aa0.67□□□□□ -2.3
HMGN2P39-201ENST00000398005 DIP2AQ14689 1571 aa0.66□□□□□ -2.3
HMGN2P39-201ENST00000398005 PLCH1Q4KWH8 1693 aa0.66□□□□□ -2.3
HMGN2P39-201ENST00000398005 CPSF4LA6NMK7 179 aaKnown RBP0.66□□□□□ -2.3
HMGN2P39-201ENST00000398005 K7EQZ3 153 aa0.66□□□□□ -2.3
HMGN2P39-201ENST00000398005 ENHOQ6UWT2 76 aa0.66□□□□□ -2.3
HMGN2P39-201ENST00000398005 SMIM5Q71RC9 77 aa0.66□□□□□ -2.3
HMGN2P39-201ENST00000398005 DNAJC13O75165 2243 aa0.66□□□□□ -2.3
HMGN2P39-201ENST00000398005 QSER1Q2KHR3 1735 aa0.66□□□□□ -2.3
HMGN2P39-201ENST00000398005 COL14A1Q05707 1796 aaKnown RBP0.65□□□□□ -2.3
HMGN2P39-201ENST00000398005 DOT1LQ8TEK3 1739 aa0.65□□□□□ -2.31
HMGN2P39-201ENST00000398005 FMN2Q9NZ56 1722 aa0.65□□□□□ -2.31
HMGN2P39-201ENST00000398005 LCE6AA0A183 80 aa0.65□□□□□ -2.31
HMGN2P39-201ENST00000398005 COX6B1P14854 86 aa0.65□□□□□ -2.31
HMGN2P39-201ENST00000398005 MRPL34Q9BQ48 92 aaKnown RBP0.65□□□□□ -2.31
HMGN2P39-201ENST00000398005 UBL5Q9BZL1 73 aa0.65□□□□□ -2.31
HMGN2P39-201ENST00000398005 WIZO95785 1651 aa0.65□□□□□ -2.31
HMGN2P39-201ENST00000398005 FBN3Q75N90 2809 aa0.65□□□□□ -2.31
HMGN2P39-201ENST00000398005 RICTORQ6R327 1708 aa0.64□□□□□ -2.31
HMGN2P39-201ENST00000398005 FCGBPQ9Y6R7 5405 aaPredicted RBP0.64□□□□□ -2.31
HMGN2P39-201ENST00000398005 KRTAP21-2Q3LI59 83 aa0.64□□□□□ -2.31
HMGN2P39-201ENST00000398005 BCORQ6W2J9 1755 aa0.64□□□□□ -2.31
HMGN2P39-201ENST00000398005 CICQ96RK0 1608 aaPredicted RBP0.64□□□□□ -2.31
HMGN2P39-201ENST00000398005 EIF2AK4Q9P2K8 1649 aaKnown RBP0.64□□□□□ -2.31
HMGN2P39-201ENST00000398005 NHSQ6T4R5 1651 aa0.63□□□□□ -2.31
HMGN2P39-201ENST00000398005 TIAM1Q13009 1591 aa0.63□□□□□ -2.31
HMGN2P39-201ENST00000398005 NWD1Q149M9 1564 aa0.63□□□□□ -2.31
HMGN2P39-201ENST00000398005 RALGAPBQ86X10 1494 aa0.63□□□□□ -2.31
HMGN2P39-201ENST00000398005 LINC01549A6NIU2 74 aa0.63□□□□□ -2.31
HMGN2P39-201ENST00000398005 CCL22O00626 93 aa0.63□□□□□ -2.31
HMGN2P39-201ENST00000398005 FXYD6Q9H0Q3 95 aa0.63□□□□□ -2.31
HMGN2P39-201ENST00000398005 PARP4Q9UKK3 1724 aaKnown RBP0.63□□□□□ -2.31
HMGN2P39-201ENST00000398005 CADP27708 2225 aa0.62□□□□□ -2.31
HMGN2P39-201ENST00000398005 PREX1Q8TCU6 1659 aa0.62□□□□□ -2.31
HMGN2P39-201ENST00000398005 APLNQ9ULZ1 77 aa0.62□□□□□ -2.31
HMGN2P39-201ENST00000398005 CACNA1CQ13936 2221 aa0.62□□□□□ -2.31
HMGN2P39-201ENST00000398005 EEA1Q15075 1411 aa0.62□□□□□ -2.31
HMGN2P39-201ENST00000398005 OTOGLQ3ZCN5 2332 aa0.61□□□□□ -2.31
HMGN2P39-201ENST00000398005 NRAPQ86VF7 1730 aa0.61□□□□□ -2.31
HMGN2P39-201ENST00000398005 BIVM-ERCC5R4GMW8 1640 aa0.61□□□□□ -2.31
HMGN2P39-201ENST00000398005 SPRR1AP35321 89 aa0.61□□□□□ -2.31
HMGN2P39-201ENST00000398005 Q5VSD8 79 aa0.61□□□□□ -2.31
HMGN2P39-201ENST00000398005 ROS1P08922 2347 aa0.61□□□□□ -2.31
HMGN2P39-201ENST00000398005 ASXL3Q9C0F0 2248 aa0.6□□□□□ -2.31
HMGN2P39-201ENST00000398005 ZDBF2Q9HCK1 2354 aa0.6□□□□□ -2.31
HMGN2P39-201ENST00000398005 TSC2P49815 1807 aa0.6□□□□□ -2.31
HMGN2P39-201ENST00000398005 MRPL33O75394 65 aaKnown RBP0.6□□□□□ -2.31
HMGN2P39-201ENST00000398005 SPRR1BP22528 89 aa0.6□□□□□ -2.31
HMGN2P39-201ENST00000398005 FCER1GP30273 86 aa0.6□□□□□ -2.31
HMGN2P39-201ENST00000398005 PRB3Q04118 309 aaPredicted RBP0.6□□□□□ -2.31
HMGN2P39-201ENST00000398005 DEFB105AQ8NG35 78 aa0.6□□□□□ -2.31
HMGN2P39-201ENST00000398005 COL6A6A6NMZ7 2263 aa0.6□□□□□ -2.31
HMGN2P39-201ENST00000398005 NESP48681 1621 aa0.6□□□□□ -2.31
HMGN2P39-201ENST00000398005 ABCA6Q8N139 1617 aa0.6□□□□□ -2.31
HMGN2P39-201ENST00000398005 TNRC6CQ9HCJ0 1690 aaKnown RBP0.59□□□□□ -2.31
HMGN2P39-201ENST00000398005 PLXNC1O60486 1568 aa0.59□□□□□ -2.31
HMGN2P39-201ENST00000398005 NDUFA3O95167 84 aa0.59□□□□□ -2.31
HMGN2P39-201ENST00000398005 COX6B2Q6YFQ2 88 aa0.59□□□□□ -2.31
HMGN2P39-201ENST00000398005 CDKN2A-AS1Q9UH64 79 aa0.59□□□□□ -2.31
HMGN2P39-201ENST00000398005 PRXQ9BXM0 1461 aa0.59□□□□□ -2.32
HMGN2P39-201ENST00000398005 ABCA10Q8WWZ4 1543 aa0.59□□□□□ -2.32
HMGN2P39-201ENST00000398005 KNTC1P50748 2209 aa0.58□□□□□ -2.32
HMGN2P39-201ENST00000398005 DDX60LQ5H9U9 1706 aaKnown RBP0.58□□□□□ -2.32
HMGN2P39-201ENST00000398005 THOC2Q8NI27 1593 aaKnown RBP0.58□□□□□ -2.32
HMGN2P39-201ENST00000398005 ETDCA0A1B0GVM5 59 aa0.58□□□□□ -2.32
HMGN2P39-201ENST00000398005 SPINK4O60575 86 aa0.58□□□□□ -2.32
HMGN2P39-201ENST00000398005 H1FX-AS1Q4G0G2 97 aa0.58□□□□□ -2.32
HMGN2P39-201ENST00000398005 PRO3102Q9H379 93 aa0.58□□□□□ -2.32
HMGN2P39-201ENST00000398005 KCNQ1DNQ9H478 68 aa0.58□□□□□ -2.32
HMGN2P39-201ENST00000398005 ASH1LQ9NR48 2969 aaKnown RBP0.58□□□□□ -2.32
HMGN2P39-201ENST00000398005 CPS1P31327 1500 aa0.58□□□□□ -2.32
HMGN2P39-201ENST00000398005 PREX2Q70Z35 1606 aa0.57□□□□□ -2.32
HMGN2P39-201ENST00000398005 DEFB131BA0A096LNP1 70 aa0.57□□□□□ -2.32
HMGN2P39-201ENST00000398005 KLK9Q2XQG4 91 aa0.57□□□□□ -2.32
HMGN2P39-201ENST00000398005 LELP1Q5T871 98 aa0.57□□□□□ -2.32
HMGN2P39-201ENST00000398005 SPINK6Q6UWN8 80 aa0.57□□□□□ -2.32
HMGN2P39-201ENST00000398005 WFDC13Q8IUB5 93 aa0.57□□□□□ -2.32
HMGN2P39-201ENST00000398005 GLI2P10070 1586 aa0.57□□□□□ -2.32
HMGN2P39-201ENST00000398005 ALS2Q96Q42 1657 aa0.56□□□□□ -2.32
HMGN2P39-201ENST00000398005 JMJD1CQ15652 2540 aa0.56□□□□□ -2.32
HMGN2P39-201ENST00000398005 ABCC6O95255 1503 aa0.56□□□□□ -2.32
HMGN2P39-201ENST00000398005 LINC00158P58513 81 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms