RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ERC2-IT1O76042 136 aa10.62□□□□□ -0.71
GNE-202ENST00000396594 PTPN13Q12923 2485 aa10.61□□□□□ -0.71
GNE-202ENST00000396594 NOTCH2Q04721 2471 aa10.6□□□□□ -0.71
GNE-202ENST00000396594 PRR34Q9NV39 138 aa10.6□□□□□ -0.71
GNE-202ENST00000396594 KCNQ1DNQ9H478 68 aa10.58□□□□□ -0.72
GNE-202ENST00000396594 LOC101927531A0A1B0GV80 90 aa10.57□□□□□ -0.72
GNE-202ENST00000396594 AGRNO00468 2067 aa10.57□□□□□ -0.72
GNE-202ENST00000396594 A0A087WVE0 104 aa10.57□□□□□ -0.72
GNE-202ENST00000396594 VPREB1P12018 145 aa10.57□□□□□ -0.72
GNE-202ENST00000396594 SORL1Q92673 2214 aa10.57□□□□□ -0.72
GNE-202ENST00000396594 LINC00336Q6ZUF6 198 aa10.57□□□□□ -0.72
GNE-202ENST00000396594 LINC00476Q8WZB0 136 aa10.56□□□□□ -0.72
GNE-202ENST00000396594 HIVEP3Q5T1R4 2406 aa10.56□□□□□ -0.72
GNE-202ENST00000396594 SSBP3-AS1Q7Z2R9 100 aa10.56□□□□□ -0.72
GNE-202ENST00000396594 NCOR2Q9Y618 2525 aa10.56□□□□□ -0.72
GNE-202ENST00000396594 EPM2AB3EWF7 344 aa10.56□□□□□ -0.72
GNE-202ENST00000396594 RPS28P62857 69 aaKnown RBP10.55□□□□□ -0.72
GNE-202ENST00000396594 SOSTDC1Q6X4U4 206 aa10.55□□□□□ -0.72
GNE-202ENST00000396594 TYMSOSQ8TAI1 123 aa10.54□□□□□ -0.72
GNE-202ENST00000396594 CDIP1Q9H305 208 aa10.54□□□□□ -0.72
GNE-202ENST00000396594 LINC00313P59037 77 aa10.53□□□□□ -0.72
GNE-202ENST00000396594 PRO0461Q9UI25 63 aa10.53□□□□□ -0.72
GNE-202ENST00000396594 IGF2RP11717 2491 aa10.53□□□□□ -0.72
GNE-202ENST00000396594 LITAFQ99732 161 aa10.52□□□□□ -0.73
GNE-202ENST00000396594 IGLV1-50A0A075B6I6 118 aa10.51□□□□□ -0.73
GNE-202ENST00000396594 PRR4Q16378 134 aa10.51□□□□□ -0.73
GNE-202ENST00000396594 C1orf195Q5TG92 126 aa10.51□□□□□ -0.73
GNE-202ENST00000396594 TM2D3Q9BRN9 247 aa10.51□□□□□ -0.73
GNE-202ENST00000396594 TRAV22A0A0B4J277 110 aa10.5□□□□□ -0.73
GNE-202ENST00000396594 SMIM29Q86T20 159 aa10.5□□□□□ -0.73
GNE-202ENST00000396594 A8MWP4 228 aa10.5□□□□□ -0.73
GNE-202ENST00000396594 PCOTHQ58A44 107 aa10.49□□□□□ -0.73
GNE-202ENST00000396594 PHF5AQ7RTV0 110 aaKnown RBP10.49□□□□□ -0.73
GNE-202ENST00000396594 C7orf65Q6ZTY9 151 aa10.48□□□□□ -0.73
GNE-202ENST00000396594 TLN1Q9Y490 2541 aaKnown RBP10.47□□□□□ -0.73
GNE-202ENST00000396594 SONP18583 2426 aaKnown RBP10.47□□□□□ -0.73
GNE-202ENST00000396594 LINC00528Q8N1L1 170 aa10.45□□□□□ -0.74
GNE-202ENST00000396594 FAM218AQ96MZ4 157 aa10.45□□□□□ -0.74
GNE-202ENST00000396594 SPACA4Q8TDM5 124 aa10.45□□□□□ -0.74
GNE-202ENST00000396594 K7EIL1 84 aa10.44□□□□□ -0.74
GNE-202ENST00000396594 SMCPP49901 116 aaPredicted RBP10.44□□□□□ -0.74
GNE-202ENST00000396594 CCDC168Q8NDH2 2452 aa10.44□□□□□ -0.74
GNE-202ENST00000396594 CNBPP62633 177 aaKnown RBP10.44□□□□□ -0.74
GNE-202ENST00000396594 A0A1B0GU69 56 aa10.42□□□□□ -0.74
GNE-202ENST00000396594 IGKV2D-30A0A075B6S6 120 aa10.42□□□□□ -0.74
GNE-202ENST00000396594 IGKV2-30P06310 120 aa10.42□□□□□ -0.74
GNE-202ENST00000396594 IGLV5-37A0A075B6J1 123 aa10.41□□□□□ -0.74
GNE-202ENST00000396594 ST20-AS1Q8NBB2 130 aa10.41□□□□□ -0.74
GNE-202ENST00000396594 ATP11AUNQ6ZP68 121 aa10.41□□□□□ -0.74
GNE-202ENST00000396594 C9orf163Q8N9P6 203 aa10.41□□□□□ -0.74
GNE-202ENST00000396594 MRPL34Q9BQ48 92 aaKnown RBP10.41□□□□□ -0.74
GNE-202ENST00000396594 ZNF861PO60384 105 aa10.4□□□□□ -0.74
GNE-202ENST00000396594 PMAIP1Q13794 54 aa10.39□□□□□ -0.75
GNE-202ENST00000396594 WIPF1O43516 503 aa10.38□□□□□ -0.75
GNE-202ENST00000396594 A0A0U1RQV1 116 aa10.37□□□□□ -0.75
GNE-202ENST00000396594 KRTAP10-11P60412 298 aa10.37□□□□□ -0.75
GNE-202ENST00000396594 DEFB116Q30KQ4 102 aa10.36□□□□□ -0.75
GNE-202ENST00000396594 C15orf56Q8N910 161 aa10.36□□□□□ -0.75
GNE-202ENST00000396594 GIG44P09565 113 aaPredicted RBP10.35□□□□□ -0.75
GNE-202ENST00000396594 A0A087WTM6 91 aa10.35□□□□□ -0.75
GNE-202ENST00000396594 KRTAP1-3Q8IUG1 177 aa10.34□□□□□ -0.75
GNE-202ENST00000396594 ABCA2Q9BZC7 2435 aa10.34□□□□□ -0.75
GNE-202ENST00000396594 ZNF575Q86XF7 245 aa10.33□□□□□ -0.76
GNE-202ENST00000396594 CYP4F30PQ9H0H9 118 aa10.32□□□□□ -0.76
GNE-202ENST00000396594 Q9UF83 564 aa10.32□□□□□ -0.76
GNE-202ENST00000396594 CD164Q04900 197 aa10.31□□□□□ -0.76
GNE-202ENST00000396594 LINC00304Q8N9R0 145 aa10.31□□□□□ -0.76
GNE-202ENST00000396594 APLNQ9ULZ1 77 aa10.31□□□□□ -0.76
GNE-202ENST00000396594 RETNLBQ9BQ08 111 aa10.3□□□□□ -0.76
GNE-202ENST00000396594 SPINK1P00995 79 aa10.3□□□□□ -0.76
GNE-202ENST00000396594 PRR15Q8IV56 129 aa10.29□□□□□ -0.76
GNE-202ENST00000396594 PRO0628Q9UI54 55 aa10.29□□□□□ -0.76
GNE-202ENST00000396594 SERTAD4-AS1Q5TG53 156 aa10.29□□□□□ -0.76
GNE-202ENST00000396594 A0A1B0GVX0 72 aa10.27□□□□□ -0.76
GNE-202ENST00000396594 KRTAP1-1Q07627 177 aa10.27□□□□□ -0.76
GNE-202ENST00000396594 C8orf17Q9NRJ1 99 aa10.27□□□□□ -0.77
GNE-202ENST00000396594 Q96NJ1 140 aa10.26□□□□□ -0.77
GNE-202ENST00000396594 KRTAP10-3P60369 221 aa10.26□□□□□ -0.77
GNE-202ENST00000396594 LINC01600Q96MT4 127 aa10.26□□□□□ -0.77
GNE-202ENST00000396594 IGFL1Q6UW32 110 aa10.26□□□□□ -0.77
GNE-202ENST00000396594 DOPEY1Q5JWR5 2465 aa10.25□□□□□ -0.77
GNE-202ENST00000396594 MUC4Q99102 2169 aa10.25□□□□□ -0.77
GNE-202ENST00000396594 MYO9AB2RTY4 2548 aa10.25□□□□□ -0.77
GNE-202ENST00000396594 LRRK2Q5S007 2527 aa10.25□□□□□ -0.77
GNE-202ENST00000396594 J3QL48 77 aa10.25□□□□□ -0.77
GNE-202ENST00000396594 IGLV7-43P04211 117 aa10.25□□□□□ -0.77
GNE-202ENST00000396594 PSPHP1O15172 72 aa10.24□□□□□ -0.77
GNE-202ENST00000396594 PIEZO2Q9H5I5 2752 aa10.23□□□□□ -0.77
GNE-202ENST00000396594 C9orf129Q5T035 196 aaKnown RBP10.23□□□□□ -0.77
GNE-202ENST00000396594 CHTF8P0CG12 524 aa10.22□□□□□ -0.77
GNE-202ENST00000396594 C2CD3Q4AC94 2353 aa10.21□□□□□ -0.78
GNE-202ENST00000396594 KLKP1Q107X0 134 aa10.2□□□□□ -0.78
GNE-202ENST00000396594 SPRR4Q96PI1 79 aa10.2□□□□□ -0.78
GNE-202ENST00000396594 Q8N377 158 aa10.19□□□□□ -0.78
GNE-202ENST00000396594 MYO18BQ8IUG5 2567 aa10.18□□□□□ -0.78
GNE-202ENST00000396594 FAM168BA1KXE4 195 aa10.17□□□□□ -0.78
GNE-202ENST00000396594 SPANXA2-OT1Q8N9U9 137 aa10.17□□□□□ -0.78
GNE-202ENST00000396594 K7EQZ3 153 aa10.16□□□□□ -0.78
GNE-202ENST00000396594 FAM229BQ4G0N7 80 aa10.16□□□□□ -0.78
GNE-202ENST00000396594 IGLV5-48A0A075B6I7 105 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms