RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 MSMBP08118 114 aa6.74□□□□□ -1.33
CDRT1-204ENST00000395906 HIGD2AQ9BW72 106 aa6.74□□□□□ -1.33
CDRT1-204ENST00000395906 UBE2L6O14933 153 aa6.73□□□□□ -1.33
CDRT1-204ENST00000395906 UBE2AP49459 152 aa6.73□□□□□ -1.33
CDRT1-204ENST00000395906 Q8N9W7 124 aa6.73□□□□□ -1.33
CDRT1-204ENST00000395906 COX7B2Q8TF08 81 aa6.73□□□□□ -1.33
CDRT1-204ENST00000395906 F8P00451 2351 aa6.73□□□□□ -1.33
CDRT1-204ENST00000395906 C8orf87E5RJ46 101 aa6.73□□□□□ -1.33
CDRT1-204ENST00000395906 ATP6V0E1O15342 81 aa6.73□□□□□ -1.33
CDRT1-204ENST00000395906 LINC00269Q8N2A0 174 aa6.73□□□□□ -1.33
CDRT1-204ENST00000395906 ATRQ13535 2644 aa6.72□□□□□ -1.33
CDRT1-204ENST00000395906 A8MU10 97 aa6.72□□□□□ -1.33
CDRT1-204ENST00000395906 A8MUN3 132 aa6.72□□□□□ -1.33
CDRT1-204ENST00000395906 LY6EQ16553 131 aa6.72□□□□□ -1.33
CDRT1-204ENST00000395906 C9orf66Q5T8R8 295 aa6.72□□□□□ -1.33
CDRT1-204ENST00000395906 A0A096LNT2 108 aa6.72□□□□□ -1.33
CDRT1-204ENST00000395906 CD164L2Q6UWJ8 174 aa6.72□□□□□ -1.33
CDRT1-204ENST00000395906 SCXQ7RTU7 201 aa6.72□□□□□ -1.33
CDRT1-204ENST00000395906 KRTAP1-3Q8IUG1 177 aa6.72□□□□□ -1.33
CDRT1-204ENST00000395906 IGKV3-7A0A075B6H7 116 aa6.71□□□□□ -1.33
CDRT1-204ENST00000395906 B4DSR2 109 aa6.71□□□□□ -1.33
CDRT1-204ENST00000395906 NDUFA4O00483 81 aa6.71□□□□□ -1.33
CDRT1-204ENST00000395906 C11orf44Q8N8P7 122 aa6.71□□□□□ -1.33
CDRT1-204ENST00000395906 TENM1Q9UKZ4 2725 aa6.71□□□□□ -1.34
CDRT1-204ENST00000395906 K7EQD1 137 aa6.71□□□□□ -1.34
CDRT1-204ENST00000395906 ATP11AUNQ6ZP68 121 aa6.71□□□□□ -1.34
CDRT1-204ENST00000395906 G3V318 75 aa6.7□□□□□ -1.34
CDRT1-204ENST00000395906 Q5VV11 94 aa6.7□□□□□ -1.34
CDRT1-204ENST00000395906 VWFP04275 2813 aa6.7□□□□□ -1.34
CDRT1-204ENST00000395906 C16orf90A8MZG2 172 aa6.7□□□□□ -1.34
CDRT1-204ENST00000395906 K7EMT4 169 aa6.7□□□□□ -1.34
CDRT1-204ENST00000395906 PSCAO43653 123 aa6.7□□□□□ -1.34
CDRT1-204ENST00000395906 NOTCH3Q9UM47 2321 aa6.7□□□□□ -1.34
CDRT1-204ENST00000395906 Q6ZSN1 163 aa6.69□□□□□ -1.34
CDRT1-204ENST00000395906 SMR3AQ99954 134 aa6.69□□□□□ -1.34
CDRT1-204ENST00000395906 TRRAPQ9Y4A5 3859 aa6.69□□□□□ -1.34
CDRT1-204ENST00000395906 A6NN06 94 aa6.69□□□□□ -1.34
CDRT1-204ENST00000395906 IGHV4-31P0DP07 118 aa6.68□□□□□ -1.34
CDRT1-204ENST00000395906 NANOS2P60321 138 aaKnown RBP6.68□□□□□ -1.34
CDRT1-204ENST00000395906 SPTSSBQ8NFR3 76 aa6.68□□□□□ -1.34
CDRT1-204ENST00000395906 TOMM7Q9P0U1 55 aa6.68□□□□□ -1.34
CDRT1-204ENST00000395906 C2CD3Q4AC94 2353 aa6.68□□□□□ -1.34
CDRT1-204ENST00000395906 SORL1Q92673 2214 aa6.68□□□□□ -1.34
CDRT1-204ENST00000395906 TRBV6-8A0A0A6YYG3 113 aa6.67□□□□□ -1.34
CDRT1-204ENST00000395906 H3BUX3 64 aa6.67□□□□□ -1.34
CDRT1-204ENST00000395906 RHPN1-AS1Q9BWJ2 59 aa6.67□□□□□ -1.34
CDRT1-204ENST00000395906 CYP4F30PQ9H0H9 118 aa6.67□□□□□ -1.34
CDRT1-204ENST00000395906 DSCR9P59020 149 aa6.67□□□□□ -1.34
CDRT1-204ENST00000395906 C7orf65Q6ZTY9 151 aa6.67□□□□□ -1.34
CDRT1-204ENST00000395906 H3BQ85 93 aa6.66□□□□□ -1.34
CDRT1-204ENST00000395906 CHKB-CPT1BH3BT56 60 aa6.66□□□□□ -1.34
CDRT1-204ENST00000395906 IGHV3-53P01767 116 aa6.66□□□□□ -1.34
CDRT1-204ENST00000395906 IGKV4-1P06312 121 aa6.66□□□□□ -1.34
CDRT1-204ENST00000395906 MUC7Q8TAX7 377 aa6.66□□□□□ -1.34
CDRT1-204ENST00000395906 CDC42SE2Q9NRR3 84 aa6.66□□□□□ -1.34
CDRT1-204ENST00000395906 MINOS1-NBL1R4GNA1 71 aa6.66□□□□□ -1.34
CDRT1-204ENST00000395906 IGKV3-20P01619 116 aa6.66□□□□□ -1.34
CDRT1-204ENST00000395906 IGHV4-59P01825 116 aa6.66□□□□□ -1.34
CDRT1-204ENST00000395906 DEFB112Q30KQ8 113 aa6.66□□□□□ -1.34
CDRT1-204ENST00000395906 LINC00575Q6W349 94 aa6.66□□□□□ -1.34
CDRT1-204ENST00000395906 LCA10Q71F78 164 aa6.66□□□□□ -1.34
CDRT1-204ENST00000395906 DIRC1Q969H9 104 aa6.66□□□□□ -1.34
CDRT1-204ENST00000395906 HCG22E2RYF7 251 aa6.65□□□□□ -1.34
CDRT1-204ENST00000395906 SPINK13Q1W4C9 94 aa6.65□□□□□ -1.34
CDRT1-204ENST00000395906 SPATA3Q8NHX4 192 aa6.65□□□□□ -1.34
CDRT1-204ENST00000395906 LCE6AA0A183 80 aa6.65□□□□□ -1.34
CDRT1-204ENST00000395906 LINC01006Q8NI28 216 aa6.63□□□□□ -1.35
CDRT1-204ENST00000395906 LIMD2Q9BT23 127 aa6.63□□□□□ -1.35
CDRT1-204ENST00000395906 C6orf99Q4VX62 202 aa6.62□□□□□ -1.35
CDRT1-204ENST00000395906 C10orf99Q6UWK7 81 aa6.62□□□□□ -1.35
CDRT1-204ENST00000395906 C5orf56Q8N8D9 126 aa6.62□□□□□ -1.35
CDRT1-204ENST00000395906 Q8N9L7 120 aa6.62□□□□□ -1.35
CDRT1-204ENST00000395906 ZCCHC13Q8WW36 166 aaKnown RBP6.62□□□□□ -1.35
CDRT1-204ENST00000395906 HTN1P15515 57 aa6.61□□□□□ -1.35
CDRT1-204ENST00000395906 STAB1Q9NY15 2570 aa6.6□□□□□ -1.35
CDRT1-204ENST00000395906 ESM1Q9NQ30 184 aa6.6□□□□□ -1.35
CDRT1-204ENST00000395906 PRR3P79522 188 aaKnown RBP6.6□□□□□ -1.35
CDRT1-204ENST00000395906 FAM30AQ9NZY2 134 aa6.6□□□□□ -1.35
CDRT1-204ENST00000395906 FBN1P35555 2871 aaKnown RBP6.59□□□□□ -1.35
CDRT1-204ENST00000395906 KRTAP1-1Q07627 177 aa6.59□□□□□ -1.35
CDRT1-204ENST00000395906 PKD1L1Q8TDX9 2849 aa6.59□□□□□ -1.35
CDRT1-204ENST00000395906 COL6A5A8TX70 2615 aa6.59□□□□□ -1.35
CDRT1-204ENST00000395906 IGLV4-60A0A075B6I1 120 aa6.59□□□□□ -1.36
CDRT1-204ENST00000395906 IGHV3-11P01762 117 aa6.59□□□□□ -1.36
CDRT1-204ENST00000395906 A6NDX4 124 aa6.58□□□□□ -1.36
CDRT1-204ENST00000395906 USMG5Q96IX5 58 aa6.58□□□□□ -1.36
CDRT1-204ENST00000395906 Q75L30 129 aa6.58□□□□□ -1.36
CDRT1-204ENST00000395906 Q8N9P0 234 aaPredicted RBP6.58□□□□□ -1.36
CDRT1-204ENST00000395906 PRR15LQ9BU68 103 aa6.58□□□□□ -1.36
CDRT1-204ENST00000395906 IGHV3OR16-9A0A0B4J2B5 98 aa6.57□□□□□ -1.36
CDRT1-204ENST00000395906 COX7BP24311 80 aa6.57□□□□□ -1.36
CDRT1-204ENST00000395906 Q6ZQY7 126 aa6.57□□□□□ -1.36
CDRT1-204ENST00000395906 NKAPP1Q8N9T2 125 aa6.57□□□□□ -1.36
CDRT1-204ENST00000395906 DEFB114Q30KQ6 69 aa6.57□□□□□ -1.36
CDRT1-204ENST00000395906 LINC00612Q8N6U2 182 aa6.57□□□□□ -1.36
CDRT1-204ENST00000395906 A6NED7 52 aa6.56□□□□□ -1.36
CDRT1-204ENST00000395906 SMIM29Q86T20 159 aa6.56□□□□□ -1.36
CDRT1-204ENST00000395906 CDC42SE1Q9NRR8 79 aa6.56□□□□□ -1.36
CDRT1-204ENST00000395906 CELA1Q9UNI1 258 aa6.56□□□□□ -1.36
CDRT1-204ENST00000395906 Q6YL49 198 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms