RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 SMCR5Q8TEV8 140 aa10.04□□□□□ -0.8
MKS1-202ENST00000393119 CRPP02741 224 aa10.04□□□□□ -0.8
MKS1-202ENST00000393119 MIR7-3HGQ8N6C7 128 aa10.04□□□□□ -0.8
MKS1-202ENST00000393119 Q9HAA7 133 aa10.04□□□□□ -0.8
MKS1-202ENST00000393119 LINC00158P58513 81 aa10.03□□□□□ -0.8
MKS1-202ENST00000393119 FAM236AA0A1B0GUQ0 79 aa10.02□□□□□ -0.8
MKS1-202ENST00000393119 FAM236BA0A1B0GV22 79 aa10.02□□□□□ -0.8
MKS1-202ENST00000393119 CIRBPQ14011 172 aaKnown RBP10.02□□□□□ -0.8
MKS1-202ENST00000393119 DYNC2H1Q8NCM8 4307 aaKnown RBP10.02□□□□□ -0.81
MKS1-202ENST00000393119 KRTAP26-1Q6PEX3 210 aa10.02□□□□□ -0.81
MKS1-202ENST00000393119 C22orf24Q9Y442 160 aa10.02□□□□□ -0.81
MKS1-202ENST00000393119 HIGD2BQ4VC39 106 aa10.01□□□□□ -0.81
MKS1-202ENST00000393119 UNQ6190/PRO20217Q6UXQ8 127 aa10.01□□□□□ -0.81
MKS1-202ENST00000393119 LINC00643Q86TS7 51 aa10.01□□□□□ -0.81
MKS1-202ENST00000393119 Q8IZM0 81 aa10□□□□□ -0.81
MKS1-202ENST00000393119 PPDPFQ9H3Y8 114 aa10□□□□□ -0.81
MKS1-202ENST00000393119 C3orf22Q8N5N4 141 aa10□□□□□ -0.81
MKS1-202ENST00000393119 LINC01556Q5JQF7 62 aa9.99□□□□□ -0.81
MKS1-202ENST00000393119 CASC10Q5T4H9 136 aa9.99□□□□□ -0.81
MKS1-202ENST00000393119 IGKV2D-24A0A075B6R9 120 aa9.99□□□□□ -0.81
MKS1-202ENST00000393119 SPAG11BQ08648 103 aa9.98□□□□□ -0.81
MKS1-202ENST00000393119 UQCRQO14949 82 aa9.97□□□□□ -0.81
MKS1-202ENST00000393119 CXCL5P42830 114 aa9.97□□□□□ -0.81
MKS1-202ENST00000393119 TRACP01848 142 aa9.97□□□□□ -0.81
MKS1-202ENST00000393119 HIST1H4AP62805 103 aaKnown RBP9.97□□□□□ -0.81
MKS1-202ENST00000393119 PRR3P79522 188 aaKnown RBP9.97□□□□□ -0.81
MKS1-202ENST00000393119 CCL18P55774 89 aa9.96□□□□□ -0.81
MKS1-202ENST00000393119 DNAH10OSP0CZ25 163 aa9.96□□□□□ -0.82
MKS1-202ENST00000393119 FBN3Q75N90 2809 aa9.96□□□□□ -0.82
MKS1-202ENST00000393119 C2orf48Q96LS8 159 aa9.95□□□□□ -0.82
MKS1-202ENST00000393119 IBA57-AS1B1ANH7 110 aa9.95□□□□□ -0.82
MKS1-202ENST00000393119 IGKV2-28A0A075B6P5 120 aa9.94□□□□□ -0.82
MKS1-202ENST00000393119 IGKV2D-28P01615 120 aa9.94□□□□□ -0.82
MKS1-202ENST00000393119 C9orf153Q5TBE3 101 aa9.94□□□□□ -0.82
MKS1-202ENST00000393119 C15orf56Q8N910 161 aa9.94□□□□□ -0.82
MKS1-202ENST00000393119 Q8NDZ9 215 aa9.94□□□□□ -0.82
MKS1-202ENST00000393119 KRTAP1-5Q9BYS1 174 aa9.94□□□□□ -0.82
MKS1-202ENST00000393119 KLK5Q9Y337 293 aaPredicted RBP9.94□□□□□ -0.82
MKS1-202ENST00000393119 LINC01561Q8N1V8 128 aa9.93□□□□□ -0.82
MKS1-202ENST00000393119 C1orf43Q9BWL3 253 aa9.93□□□□□ -0.82
MKS1-202ENST00000393119 TGP01266 2768 aa9.93□□□□□ -0.82
MKS1-202ENST00000393119 A0A1B0GX51 115 aa9.93□□□□□ -0.82
MKS1-202ENST00000393119 LECT2O14960 151 aa9.93□□□□□ -0.82
MKS1-202ENST00000393119 SND1-IT1Q9HBX3 110 aa9.93□□□□□ -0.82
MKS1-202ENST00000393119 APLNQ9ULZ1 77 aa9.93□□□□□ -0.82
MKS1-202ENST00000393119 LINC00337Q8N6G1 96 aa9.92□□□□□ -0.82
MKS1-202ENST00000393119 FAM218AQ96MZ4 157 aa9.92□□□□□ -0.82
MKS1-202ENST00000393119 C6orf48Q9UBA6 75 aa9.92□□□□□ -0.82
MKS1-202ENST00000393119 CRYGAP11844 174 aa9.91□□□□□ -0.82
MKS1-202ENST00000393119 COX7CP15954 63 aa9.91□□□□□ -0.82
MKS1-202ENST00000393119 BAALC-AS2P0C853 105 aa9.89□□□□□ -0.83
MKS1-202ENST00000393119 Q6ZRU5 148 aa9.89□□□□□ -0.83
MKS1-202ENST00000393119 COPS9Q8WXC6 57 aa9.88□□□□□ -0.83
MKS1-202ENST00000393119 KMT2AQ03164 3969 aa9.88□□□□□ -0.83
MKS1-202ENST00000393119 ZNF561-AS1K7EIQ3 104 aa9.88□□□□□ -0.83
MKS1-202ENST00000393119 XAGE1AQ9HD64 81 aa9.88□□□□□ -0.83
MKS1-202ENST00000393119 INAFM2P0DMQ5 153 aa9.87□□□□□ -0.83
MKS1-202ENST00000393119 RPS28P62857 69 aaKnown RBP9.87□□□□□ -0.83
MKS1-202ENST00000393119 CAMK2N2Q96S95 79 aa9.87□□□□□ -0.83
MKS1-202ENST00000393119 LOC107984640A0A0U1RRK4 108 aa9.86□□□□□ -0.83
MKS1-202ENST00000393119 SLPIP03973 132 aa9.86□□□□□ -0.83
MKS1-202ENST00000393119 UBE2DNLQ8IWF7 75 aa9.86□□□□□ -0.83
MKS1-202ENST00000393119 OBSCN-AS1Q96MR7 158 aa9.86□□□□□ -0.83
MKS1-202ENST00000393119 UPK3BQ9BT76 320 aa9.86□□□□□ -0.83
MKS1-202ENST00000393119 J3KT08 172 aa9.85□□□□□ -0.83
MKS1-202ENST00000393119 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
MKS1-202ENST00000393119 ATOX1O00244 68 aa9.85□□□□□ -0.83
MKS1-202ENST00000393119 NCR3O14931 201 aa9.84□□□□□ -0.83
MKS1-202ENST00000393119 OR13C6PQ8NH95 151 aa9.84□□□□□ -0.83
MKS1-202ENST00000393119 C5orf47Q569G3 176 aa9.83□□□□□ -0.84
MKS1-202ENST00000393119 VPS13DQ5THJ4 4388 aa9.83□□□□□ -0.84
MKS1-202ENST00000393119 CYSTM1Q9H1C7 97 aa9.83□□□□□ -0.84
MKS1-202ENST00000393119 USP17L23D6RBM5 183 aa9.82□□□□□ -0.84
MKS1-202ENST00000393119 FAM19A5Q7Z5A7 132 aaPredicted RBP9.81□□□□□ -0.84
MKS1-202ENST00000393119 SMIM11BQ8TCY0 68 aa9.81□□□□□ -0.84
MKS1-202ENST00000393119 RPL18AQ02543 176 aaKnown RBP9.81□□□□□ -0.84
MKS1-202ENST00000393119 COX17Q14061 63 aa9.81□□□□□ -0.84
MKS1-202ENST00000393119 GAGE2AQ6NT46 116 aa9.81□□□□□ -0.84
MKS1-202ENST00000393119 C9orf129Q5T035 196 aaKnown RBP9.8□□□□□ -0.84
MKS1-202ENST00000393119 Q6JHZ5 121 aa9.8□□□□□ -0.84
MKS1-202ENST00000393119 GVQW2A0A096LPI5 108 aaPredicted RBP9.79□□□□□ -0.84
MKS1-202ENST00000393119 TRAV13-2A0A0B4J235 113 aa9.79□□□□□ -0.84
MKS1-202ENST00000393119 M0R2N4 97 aa9.79□□□□□ -0.84
MKS1-202ENST00000393119 Q6ZRP5 223 aa9.79□□□□□ -0.84
MKS1-202ENST00000393119 DNAH2Q9P225 4427 aa9.78□□□□□ -0.84
MKS1-202ENST00000393119 hADV29S1A0JD25 119 aa9.78□□□□□ -0.84
MKS1-202ENST00000393119 NUPR2A6NF83 97 aa9.77□□□□□ -0.85
MKS1-202ENST00000393119 SYCNQ0VAF6 134 aa9.77□□□□□ -0.85
MKS1-202ENST00000393119 A0A087WYN8 130 aa9.76□□□□□ -0.85
MKS1-202ENST00000393119 TMEM258P61165 79 aa9.76□□□□□ -0.85
MKS1-202ENST00000393119 SERP2Q8N6R1 65 aa9.76□□□□□ -0.85
MKS1-202ENST00000393119 LINC00846Q9NV44 126 aa9.76□□□□□ -0.85
MKS1-202ENST00000393119 DPH3Q96FX2 82 aa9.74□□□□□ -0.85
MKS1-202ENST00000393119 DNAL4O96015 105 aa9.74□□□□□ -0.85
MKS1-202ENST00000393119 C14orf132Q9NPU4 83 aa9.74□□□□□ -0.85
MKS1-202ENST00000393119 KRTAP21-3Q3LHN1 58 aa9.73□□□□□ -0.85
MKS1-202ENST00000393119 OXTP01178 125 aa9.73□□□□□ -0.85
MKS1-202ENST00000393119 NDUFC2-KCTD14E9PQ53 114 aa9.72□□□□□ -0.85
MKS1-202ENST00000393119 H0YGX0 51 aa9.72□□□□□ -0.85
MKS1-202ENST00000393119 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms