RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CD164Q04900 197 aa11.13□□□□□ -0.63
SHANK1-204ENST00000391814 LINC00167Q96N53 147 aa11.12□□□□□ -0.63
SHANK1-204ENST00000391814 ST20-AS1Q8NBB2 130 aa11.11□□□□□ -0.63
SHANK1-204ENST00000391814 KRTAP10-9P60411 292 aa11.11□□□□□ -0.63
SHANK1-204ENST00000391814 CSPG4Q6UVK1 2322 aa11.11□□□□□ -0.63
SHANK1-204ENST00000391814 C1orf134Q5TEV5 83 aa11.11□□□□□ -0.63
SHANK1-204ENST00000391814 PTPRBP23467 1997 aa11.1□□□□□ -0.63
SHANK1-204ENST00000391814 TRAV22A0A0B4J277 110 aa11.1□□□□□ -0.63
SHANK1-204ENST00000391814 MOBPQ13875 183 aa11.09□□□□□ -0.63
SHANK1-204ENST00000391814 ERC2-IT1O76042 136 aa11.08□□□□□ -0.64
SHANK1-204ENST00000391814 Q8NBF4 154 aa11.08□□□□□ -0.64
SHANK1-204ENST00000391814 ACACBO00763 2458 aa11.07□□□□□ -0.64
SHANK1-204ENST00000391814 K7EQZ3 153 aa11.07□□□□□ -0.64
SHANK1-204ENST00000391814 CYP4F30PQ9H0H9 118 aa11.07□□□□□ -0.64
SHANK1-204ENST00000391814 SONP18583 2426 aaKnown RBP11.06□□□□□ -0.64
SHANK1-204ENST00000391814 A0A1B0GW54 56 aa11.05□□□□□ -0.64
SHANK1-204ENST00000391814 KTN1-AS1Q86SY8 53 aa11.05□□□□□ -0.64
SHANK1-204ENST00000391814 NAV3Q8IVL0 2385 aa11.05□□□□□ -0.64
SHANK1-204ENST00000391814 TRBV7-4A0A0J9YYF1 115 aa11.04□□□□□ -0.64
SHANK1-204ENST00000391814 Q6ZRX8 168 aa11.04□□□□□ -0.64
SHANK1-204ENST00000391814 MUC4Q99102 2169 aa11.04□□□□□ -0.64
SHANK1-204ENST00000391814 H7BZZ5 65 aa11.01□□□□□ -0.65
SHANK1-204ENST00000391814 C16orf95Q9H693 158 aa11.01□□□□□ -0.65
SHANK1-204ENST00000391814 J3QL48 77 aa11□□□□□ -0.65
SHANK1-204ENST00000391814 COL27A1Q8IZC6 1860 aaPredicted RBP11□□□□□ -0.65
SHANK1-204ENST00000391814 HIVEP3Q5T1R4 2406 aa11□□□□□ -0.65
SHANK1-204ENST00000391814 KLKP1Q107X0 134 aa10.99□□□□□ -0.65
SHANK1-204ENST00000391814 A0A1W2PPR1 153 aa10.99□□□□□ -0.65
SHANK1-204ENST00000391814 CHTF8P0CG12 524 aa10.99□□□□□ -0.65
SHANK1-204ENST00000391814 PHF5AQ7RTV0 110 aaKnown RBP10.99□□□□□ -0.65
SHANK1-204ENST00000391814 C10orf142B7Z368 130 aa10.97□□□□□ -0.65
SHANK1-204ENST00000391814 LINC00313P59037 77 aa10.97□□□□□ -0.65
SHANK1-204ENST00000391814 LOC101927531A0A1B0GV80 90 aa10.97□□□□□ -0.65
SHANK1-204ENST00000391814 EIF4EBP3O60516 100 aaPredicted RBP10.97□□□□□ -0.65
SHANK1-204ENST00000391814 ANKHD1Q8IWZ3 2542 aaKnown RBP10.96□□□□□ -0.65
SHANK1-204ENST00000391814 APLNQ9ULZ1 77 aa10.96□□□□□ -0.65
SHANK1-204ENST00000391814 IGLV6-57P01721 117 aa10.95□□□□□ -0.66
SHANK1-204ENST00000391814 LCA10Q71F78 164 aa10.95□□□□□ -0.66
SHANK1-204ENST00000391814 A8MWP4 228 aa10.95□□□□□ -0.66
SHANK1-204ENST00000391814 LINC01600Q96MT4 127 aa10.94□□□□□ -0.66
SHANK1-204ENST00000391814 EPM2AB3EWF7 344 aa10.94□□□□□ -0.66
SHANK1-204ENST00000391814 COX6B2Q6YFQ2 88 aa10.93□□□□□ -0.66
SHANK1-204ENST00000391814 MIR22HGQ0VDD5 57 aa10.93□□□□□ -0.66
SHANK1-204ENST00000391814 PRR15Q8IV56 129 aa10.93□□□□□ -0.66
SHANK1-204ENST00000391814 FAM168BA1KXE4 195 aa10.91□□□□□ -0.66
SHANK1-204ENST00000391814 Q96NJ1 140 aa10.91□□□□□ -0.66
SHANK1-204ENST00000391814 UQCR11O14957 56 aa10.9□□□□□ -0.66
SHANK1-204ENST00000391814 C9orf129Q5T035 196 aaKnown RBP10.9□□□□□ -0.67
SHANK1-204ENST00000391814 DOPEY1Q5JWR5 2465 aa10.89□□□□□ -0.67
SHANK1-204ENST00000391814 Q6ZRP5 223 aa10.89□□□□□ -0.67
SHANK1-204ENST00000391814 FAM229AH3BQW9 127 aa10.87□□□□□ -0.67
SHANK1-204ENST00000391814 CACNA1AO00555 2505 aa10.86□□□□□ -0.67
SHANK1-204ENST00000391814 MRPL34Q9BQ48 92 aaKnown RBP10.85□□□□□ -0.67
SHANK1-204ENST00000391814 C2CD3Q4AC94 2353 aa10.83□□□□□ -0.68
SHANK1-204ENST00000391814 WIPF1O43516 503 aa10.83□□□□□ -0.68
SHANK1-204ENST00000391814 ABCA2Q9BZC7 2435 aa10.83□□□□□ -0.68
SHANK1-204ENST00000391814 CCDC168Q8NDH2 2452 aa10.82□□□□□ -0.68
SHANK1-204ENST00000391814 GVQW2A0A096LPI5 108 aaPredicted RBP10.82□□□□□ -0.68
SHANK1-204ENST00000391814 TYMSOSQ8TAI1 123 aa10.82□□□□□ -0.68
SHANK1-204ENST00000391814 CRIPTQ9P021 101 aa10.82□□□□□ -0.68
SHANK1-204ENST00000391814 IGFL1Q6UW32 110 aa10.81□□□□□ -0.68
SHANK1-204ENST00000391814 NCOR2Q9Y618 2525 aa10.8□□□□□ -0.68
SHANK1-204ENST00000391814 C16orf90A8MZG2 172 aa10.8□□□□□ -0.68
SHANK1-204ENST00000391814 A0A0G2JQZ4 141 aa10.79□□□□□ -0.68
SHANK1-204ENST00000391814 A0A1W2PNN7 141 aa10.79□□□□□ -0.68
SHANK1-204ENST00000391814 NAV2Q8IVL1 2488 aa10.78□□□□□ -0.68
SHANK1-204ENST00000391814 PIEZO2Q9H5I5 2752 aa10.77□□□□□ -0.68
SHANK1-204ENST00000391814 CDC42SE1Q9NRR8 79 aa10.77□□□□□ -0.69
SHANK1-204ENST00000391814 IGLV1-50A0A075B6I6 118 aa10.77□□□□□ -0.69
SHANK1-204ENST00000391814 IGF2RP11717 2491 aa10.76□□□□□ -0.69
SHANK1-204ENST00000391814 DSCR10P59022 87 aa10.75□□□□□ -0.69
SHANK1-204ENST00000391814 LINC00528Q8N1L1 170 aa10.75□□□□□ -0.69
SHANK1-204ENST00000391814 C8orf17Q9NRJ1 99 aa10.74□□□□□ -0.69
SHANK1-204ENST00000391814 RTL8CO15255 209 aa10.74□□□□□ -0.69
SHANK1-204ENST00000391814 MYO18BQ8IUG5 2567 aa10.73□□□□□ -0.69
SHANK1-204ENST00000391814 Q8N377 158 aa10.73□□□□□ -0.69
SHANK1-204ENST00000391814 KCNQ1DNQ9H478 68 aa10.73□□□□□ -0.69
SHANK1-204ENST00000391814 Q5XG85 94 aa10.71□□□□□ -0.69
SHANK1-204ENST00000391814 Q1T7F1 81 aa10.71□□□□□ -0.69
SHANK1-204ENST00000391814 H3BNG1 76 aa10.71□□□□□ -0.7
SHANK1-204ENST00000391814 RBM12B-AS1Q9P1G2 102 aa10.71□□□□□ -0.7
SHANK1-204ENST00000391814 LINC01554Q52M75 96 aa10.7□□□□□ -0.7
SHANK1-204ENST00000391814 A0A0D9SG42 100 aa10.7□□□□□ -0.7
SHANK1-204ENST00000391814 C9orf92A6NGG3 77 aa10.69□□□□□ -0.7
SHANK1-204ENST00000391814 FAM229BQ4G0N7 80 aa10.68□□□□□ -0.7
SHANK1-204ENST00000391814 COL4A2P08572 1712 aa10.68□□□□□ -0.7
SHANK1-204ENST00000391814 LINC00588Q9Y4M8 146 aa10.67□□□□□ -0.7
SHANK1-204ENST00000391814 Q8NAQ8 132 aa10.66□□□□□ -0.7
SHANK1-204ENST00000391814 A0A1B0GVX0 72 aa10.65□□□□□ -0.7
SHANK1-204ENST00000391814 OBSCN-AS1Q96MR7 158 aa10.65□□□□□ -0.7
SHANK1-204ENST00000391814 PCSK5Q92824 1860 aa10.65□□□□□ -0.7
SHANK1-204ENST00000391814 SPANXA2-OT1Q8N9U9 137 aa10.64□□□□□ -0.71
SHANK1-204ENST00000391814 H3BS24 57 aa10.63□□□□□ -0.71
SHANK1-204ENST00000391814 C15orf56Q8N910 161 aa10.6□□□□□ -0.71
SHANK1-204ENST00000391814 KLK9Q2XQG4 91 aa10.6□□□□□ -0.71
SHANK1-204ENST00000391814 CYSTM1Q9H1C7 97 aa10.59□□□□□ -0.71
SHANK1-204ENST00000391814 PIEZO1Q92508 2521 aa10.57□□□□□ -0.72
SHANK1-204ENST00000391814 NBDYA0A0U1RRE5 68 aa10.56□□□□□ -0.72
SHANK1-204ENST00000391814 OCR1Q9BZK8 76 aa10.56□□□□□ -0.72
SHANK1-204ENST00000391814 EP400Q96L91 3159 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms