RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 RETNQ9HD89 108 aa13.3□□□□□ -0.28
PPFIA1-202ENST00000389547 NDUFC1O43677 76 aa13.29□□□□□ -0.28
PPFIA1-202ENST00000389547 KRTAP24-1Q3LI83 254 aa13.29□□□□□ -0.28
PPFIA1-202ENST00000389547 UBE2DNLQ8IWF7 75 aa13.29□□□□□ -0.28
PPFIA1-202ENST00000389547 C2orf48Q96LS8 159 aa13.29□□□□□ -0.28
PPFIA1-202ENST00000389547 SEC61GP60059 68 aa13.29□□□□□ -0.28
PPFIA1-202ENST00000389547 DEFB105AQ8NG35 78 aa13.29□□□□□ -0.28
PPFIA1-202ENST00000389547 CSMD1Q96PZ7 3565 aa13.29□□□□□ -0.28
PPFIA1-202ENST00000389547 TRBV7-6A0A0J9YX20 115 aa13.28□□□□□ -0.28
PPFIA1-202ENST00000389547 Q8N3U1 123 aa13.27□□□□□ -0.28
PPFIA1-202ENST00000389547 TENM4Q6N022 2769 aa13.27□□□□□ -0.28
PPFIA1-202ENST00000389547 Q6ZQY7 126 aa13.27□□□□□ -0.29
PPFIA1-202ENST00000389547 IGLV5-39A0A0G2JS06 123 aa13.26□□□□□ -0.29
PPFIA1-202ENST00000389547 BEAN1Q3B7T3 259 aa13.26□□□□□ -0.29
PPFIA1-202ENST00000389547 KLK12Q9UKR0 248 aa13.25□□□□□ -0.29
PPFIA1-202ENST00000389547 KRTAP10-3P60369 221 aa13.25□□□□□ -0.29
PPFIA1-202ENST00000389547 Q8N814 137 aa13.25□□□□□ -0.29
PPFIA1-202ENST00000389547 CYSTM1Q9H1C7 97 aa13.25□□□□□ -0.29
PPFIA1-202ENST00000389547 TRBV6-4A0A1B0GX49 114 aa13.25□□□□□ -0.29
PPFIA1-202ENST00000389547 PDE6GP18545 87 aa13.25□□□□□ -0.29
PPFIA1-202ENST00000389547 NTM-AS1Q6ZSK4 140 aa13.25□□□□□ -0.29
PPFIA1-202ENST00000389547 BSNQ9UPA5 3926 aa13.23□□□□□ -0.29
PPFIA1-202ENST00000389547 LYRM9A8MSI8 78 aa13.23□□□□□ -0.29
PPFIA1-202ENST00000389547 LINC00269Q8N2A0 174 aa13.23□□□□□ -0.29
PPFIA1-202ENST00000389547 C11orf72Q8NBR9 251 aa13.23□□□□□ -0.29
PPFIA1-202ENST00000389547 ATP5EP56381 51 aaPredicted RBP13.23□□□□□ -0.29
PPFIA1-202ENST00000389547 PRR4Q16378 134 aa13.23□□□□□ -0.29
PPFIA1-202ENST00000389547 WIPF1O43516 503 aa13.22□□□□□ -0.29
PPFIA1-202ENST00000389547 C11orf45Q8TAV5 145 aa13.22□□□□□ -0.29
PPFIA1-202ENST00000389547 ZNF561-AS1K7EIQ3 104 aa13.21□□□□□ -0.3
PPFIA1-202ENST00000389547 C9orf129Q5T035 196 aaKnown RBP13.21□□□□□ -0.3
PPFIA1-202ENST00000389547 BPY2O14599 106 aa13.2□□□□□ -0.3
PPFIA1-202ENST00000389547 TRBV6-8A0A0A6YYG3 113 aa13.2□□□□□ -0.3
PPFIA1-202ENST00000389547 DIRC1Q969H9 104 aa13.2□□□□□ -0.3
PPFIA1-202ENST00000389547 HIGD2BQ4VC39 106 aa13.2□□□□□ -0.3
PPFIA1-202ENST00000389547 SPTSSBQ8NFR3 76 aa13.2□□□□□ -0.3
PPFIA1-202ENST00000389547 LINC01600Q96MT4 127 aa13.19□□□□□ -0.3
PPFIA1-202ENST00000389547 IGKV2D-24A0A075B6R9 120 aa13.19□□□□□ -0.3
PPFIA1-202ENST00000389547 LINC01547P58512 204 aaPredicted RBP13.18□□□□□ -0.3
PPFIA1-202ENST00000389547 Q6ZVQ6 151 aa13.17□□□□□ -0.3
PPFIA1-202ENST00000389547 A8MTW9 85 aa13.17□□□□□ -0.3
PPFIA1-202ENST00000389547 FAM19A3Q7Z5A8 133 aa13.17□□□□□ -0.3
PPFIA1-202ENST00000389547 DEFB131BA0A096LNP1 70 aa13.17□□□□□ -0.3
PPFIA1-202ENST00000389547 LINC00474Q9P2X8 69 aa13.16□□□□□ -0.3
PPFIA1-202ENST00000389547 IGLV5-45A0A087WSX0 123 aa13.16□□□□□ -0.3
PPFIA1-202ENST00000389547 IGKV2-28A0A075B6P5 120 aa13.15□□□□□ -0.3
PPFIA1-202ENST00000389547 IGKV2D-28P01615 120 aa13.15□□□□□ -0.3
PPFIA1-202ENST00000389547 IGLV4-60A0A075B6I1 120 aa13.15□□□□□ -0.3
PPFIA1-202ENST00000389547 SPAG11BQ08648 103 aa13.15□□□□□ -0.3
PPFIA1-202ENST00000389547 TMEM254Q8TBM7 123 aa13.15□□□□□ -0.3
PPFIA1-202ENST00000389547 PSCAO43653 123 aa13.15□□□□□ -0.3
PPFIA1-202ENST00000389547 C3orf84H3BNL1 204 aa13.15□□□□□ -0.31
PPFIA1-202ENST00000389547 SPATA3Q8NHX4 192 aa13.15□□□□□ -0.31
PPFIA1-202ENST00000389547 TRAV10A0A0B4J240 114 aa13.14□□□□□ -0.31
PPFIA1-202ENST00000389547 MRPL55Q7Z7F7 128 aaKnown RBP13.14□□□□□ -0.31
PPFIA1-202ENST00000389547 CELA1Q9UNI1 258 aa13.14□□□□□ -0.31
PPFIA1-202ENST00000389547 XAGE1AQ9HD64 81 aa13.13□□□□□ -0.31
PPFIA1-202ENST00000389547 NANOS2P60321 138 aaKnown RBP13.13□□□□□ -0.31
PPFIA1-202ENST00000389547 A0A0J9YWU9 116 aa13.13□□□□□ -0.31
PPFIA1-202ENST00000389547 C9orf116Q5BN46 136 aaPredicted RBP13.13□□□□□ -0.31
PPFIA1-202ENST00000389547 LINC00959A0A1B0GUT2 108 aa13.12□□□□□ -0.31
PPFIA1-202ENST00000389547 COX7BP24311 80 aa13.12□□□□□ -0.31
PPFIA1-202ENST00000389547 TRBV10-3A0A0K0K1G6 114 aa13.11□□□□□ -0.31
PPFIA1-202ENST00000389547 PSPHP1O15172 72 aa13.11□□□□□ -0.31
PPFIA1-202ENST00000389547 Q8N9L7 120 aa13.1□□□□□ -0.31
PPFIA1-202ENST00000389547 A0A087WZ39 114 aa13.1□□□□□ -0.31
PPFIA1-202ENST00000389547 KPRPQ5T749 579 aaPredicted RBP13.09□□□□□ -0.31
PPFIA1-202ENST00000389547 PRYO14603 147 aa13.09□□□□□ -0.31
PPFIA1-202ENST00000389547 CSMD2Q7Z408 3487 aa13.09□□□□□ -0.31
PPFIA1-202ENST00000389547 REG3AQ06141 175 aa13.09□□□□□ -0.31
PPFIA1-202ENST00000389547 Q6ZTC4 211 aa13.08□□□□□ -0.32
PPFIA1-202ENST00000389547 Q5XG85 94 aa13.07□□□□□ -0.32
PPFIA1-202ENST00000389547 H3BQ85 93 aa13.07□□□□□ -0.32
PPFIA1-202ENST00000389547 ESRGQ1W209 222 aa13.07□□□□□ -0.32
PPFIA1-202ENST00000389547 CHCHD10Q8WYQ3 142 aaPredicted RBP13.07□□□□□ -0.32
PPFIA1-202ENST00000389547 TM2D3Q9BRN9 247 aa13.07□□□□□ -0.32
PPFIA1-202ENST00000389547 FAM30AQ9NZY2 134 aa13.07□□□□□ -0.32
PPFIA1-202ENST00000389547 NKAPP1Q8N9T2 125 aa13.07□□□□□ -0.32
PPFIA1-202ENST00000389547 OXTP01178 125 aa13.07□□□□□ -0.32
PPFIA1-202ENST00000389547 H7BZZ5 65 aa13.06□□□□□ -0.32
PPFIA1-202ENST00000389547 KMT2BQ9UMN6 2715 aaPredicted RBP13.05□□□□□ -0.32
PPFIA1-202ENST00000389547 C19orf73Q9NVV2 129 aa13.05□□□□□ -0.32
PPFIA1-202ENST00000389547 X6R8D5 127 aa13.04□□□□□ -0.32
PPFIA1-202ENST00000389547 PMAIP1Q13794 54 aa13.04□□□□□ -0.32
PPFIA1-202ENST00000389547 GIG44P09565 113 aaPredicted RBP13.03□□□□□ -0.32
PPFIA1-202ENST00000389547 CAMK2N2Q96S95 79 aa13.03□□□□□ -0.32
PPFIA1-202ENST00000389547 MP68P56378 58 aa13.02□□□□□ -0.33
PPFIA1-202ENST00000389547 Q8IZM0 81 aa13.02□□□□□ -0.33
PPFIA1-202ENST00000389547 IGHV3OR16-9A0A0B4J2B5 98 aa13□□□□□ -0.33
PPFIA1-202ENST00000389547 LINC00575Q6W349 94 aa13□□□□□ -0.33
PPFIA1-202ENST00000389547 MUC7Q8TAX7 377 aa13□□□□□ -0.33
PPFIA1-202ENST00000389547 CUBNO60494 3623 aa12.99□□□□□ -0.33
PPFIA1-202ENST00000389547 HIGD2AQ9BW72 106 aa12.97□□□□□ -0.33
PPFIA1-202ENST00000389547 F8WDY8 70 aa12.97□□□□□ -0.33
PPFIA1-202ENST00000389547 CSNK1G2-AS1Q8NCQ2 148 aa12.97□□□□□ -0.33
PPFIA1-202ENST00000389547 NBPF19A0A087WUL8 3843 aa12.97□□□□□ -0.33
PPFIA1-202ENST00000389547 UNQ6190/PRO20217Q6UXQ8 127 aa12.96□□□□□ -0.33
PPFIA1-202ENST00000389547 CXCL6P80162 114 aa12.96□□□□□ -0.34
PPFIA1-202ENST00000389547 Q6ZQT0 140 aa12.96□□□□□ -0.34
PPFIA1-202ENST00000389547 CHKB-CPT1BH3BT56 60 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms