RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 DSCAML1Q8TD84 2053 aa4.9□□□□□ -1.62
CCDC171-201ENST00000380701 TET2Q6N021 2002 aaPredicted RBP4.9□□□□□ -1.62
CCDC171-201ENST00000380701 KIAA0087Q14695 138 aa4.9□□□□□ -1.62
CCDC171-201ENST00000380701 TMEM254Q8TBM7 123 aa4.9□□□□□ -1.62
CCDC171-201ENST00000380701 HCFC1P51610 2035 aa4.9□□□□□ -1.63
CCDC171-201ENST00000380701 C1orf64Q8NEQ6 169 aa4.9□□□□□ -1.63
CCDC171-201ENST00000380701 LOC110117498A0A087WWA1 95 aa4.89□□□□□ -1.63
CCDC171-201ENST00000380701 XGP55808 180 aa4.89□□□□□ -1.63
CCDC171-201ENST00000380701 LINC00313P59037 77 aa4.89□□□□□ -1.63
CCDC171-201ENST00000380701 TRBV7-4A0A0J9YYF1 115 aa4.88□□□□□ -1.63
CCDC171-201ENST00000380701 LOC101927531A0A1B0GV80 90 aa4.88□□□□□ -1.63
CCDC171-201ENST00000380701 EPM2AB3EWF7 344 aa4.88□□□□□ -1.63
CCDC171-201ENST00000380701 PLXNB1O43157 2135 aa4.88□□□□□ -1.63
CCDC171-201ENST00000380701 IGKV2D-30A0A075B6S6 120 aa4.88□□□□□ -1.63
CCDC171-201ENST00000380701 IGKV2-30P06310 120 aa4.88□□□□□ -1.63
CCDC171-201ENST00000380701 PRR4Q16378 134 aa4.88□□□□□ -1.63
CCDC171-201ENST00000380701 ZNF462Q96JM2 2506 aa4.87□□□□□ -1.63
CCDC171-201ENST00000380701 C7orf65Q6ZTY9 151 aa4.87□□□□□ -1.63
CCDC171-201ENST00000380701 PCOTHQ58A44 107 aa4.86□□□□□ -1.63
CCDC171-201ENST00000380701 CPAMD8Q8IZJ3 1885 aa4.86□□□□□ -1.63
CCDC171-201ENST00000380701 TANC2Q9HCD6 1990 aa4.86□□□□□ -1.63
CCDC171-201ENST00000380701 K7EIL1 84 aa4.86□□□□□ -1.63
CCDC171-201ENST00000380701 FN1P02751 2386 aaKnown RBP4.85□□□□□ -1.63
CCDC171-201ENST00000380701 LINC00476Q8WZB0 136 aa4.85□□□□□ -1.63
CCDC171-201ENST00000380701 TM2D3Q9BRN9 247 aa4.85□□□□□ -1.63
CCDC171-201ENST00000380701 PLA2G2DQ9UNK4 145 aa4.85□□□□□ -1.63
CCDC171-201ENST00000380701 ANKRD11Q6UB99 2663 aaPredicted RBP4.85□□□□□ -1.63
CCDC171-201ENST00000380701 PHF5AQ7RTV0 110 aaKnown RBP4.85□□□□□ -1.63
CCDC171-201ENST00000380701 LINC00612Q8N6U2 182 aa4.85□□□□□ -1.63
CCDC171-201ENST00000380701 TRAV22A0A0B4J277 110 aa4.84□□□□□ -1.63
CCDC171-201ENST00000380701 LINC00846Q9NV44 126 aa4.84□□□□□ -1.63
CCDC171-201ENST00000380701 A0A096LNT2 108 aa4.84□□□□□ -1.63
CCDC171-201ENST00000380701 SPINK1P00995 79 aa4.84□□□□□ -1.63
CCDC171-201ENST00000380701 TLX1NBP0CAT3 122 aa4.84□□□□□ -1.63
CCDC171-201ENST00000380701 PRR34Q9NV39 138 aa4.83□□□□□ -1.64
CCDC171-201ENST00000380701 KCNQ1DNQ9H478 68 aa4.83□□□□□ -1.64
CCDC171-201ENST00000380701 CEP295Q9C0D2 2601 aa4.83□□□□□ -1.64
CCDC171-201ENST00000380701 ARHGAP32A7KAX9 2087 aa4.83□□□□□ -1.64
CCDC171-201ENST00000380701 USP9YO00507 2555 aaPredicted RBP4.83□□□□□ -1.64
CCDC171-201ENST00000380701 CSNK1G2-AS1Q8NCQ2 148 aa4.83□□□□□ -1.64
CCDC171-201ENST00000380701 VPREB1P12018 145 aa4.83□□□□□ -1.64
CCDC171-201ENST00000380701 A0A1B0GU69 56 aa4.82□□□□□ -1.64
CCDC171-201ENST00000380701 LINC00304Q8N9R0 145 aa4.82□□□□□ -1.64
CCDC171-201ENST00000380701 IGLV6-57P01721 117 aa4.82□□□□□ -1.64
CCDC171-201ENST00000380701 ZNF861PO60384 105 aa4.82□□□□□ -1.64
CCDC171-201ENST00000380701 C9orf163Q8N9P6 203 aa4.82□□□□□ -1.64
CCDC171-201ENST00000380701 ST20-AS1Q8NBB2 130 aa4.82□□□□□ -1.64
CCDC171-201ENST00000380701 A0A087WVE0 104 aa4.81□□□□□ -1.64
CCDC171-201ENST00000380701 RETNLBQ9BQ08 111 aa4.81□□□□□ -1.64
CCDC171-201ENST00000380701 A8MWP4 228 aa4.81□□□□□ -1.64
CCDC171-201ENST00000380701 IGLV1-50A0A075B6I6 118 aa4.81□□□□□ -1.64
CCDC171-201ENST00000380701 Q6ZQT0 140 aa4.81□□□□□ -1.64
CCDC171-201ENST00000380701 MTORP42345 2549 aa4.81□□□□□ -1.64
CCDC171-201ENST00000380701 A0A087WTM6 91 aa4.81□□□□□ -1.64
CCDC171-201ENST00000380701 TLN2Q9Y4G6 2542 aa4.81□□□□□ -1.64
CCDC171-201ENST00000380701 FASNP49327 2511 aaKnown RBP4.81□□□□□ -1.64
CCDC171-201ENST00000380701 EXPH5Q8NEV8 1989 aa4.8□□□□□ -1.64
CCDC171-201ENST00000380701 CCDC179H3BU77 68 aa4.8□□□□□ -1.64
CCDC171-201ENST00000380701 COX6B2Q6YFQ2 88 aa4.8□□□□□ -1.64
CCDC171-201ENST00000380701 SMIM29Q86T20 159 aa4.8□□□□□ -1.64
CCDC171-201ENST00000380701 ERC2-IT1O76042 136 aa4.8□□□□□ -1.64
CCDC171-201ENST00000380701 MRPL34Q9BQ48 92 aaKnown RBP4.8□□□□□ -1.64
CCDC171-201ENST00000380701 CNBPP62633 177 aaKnown RBP4.79□□□□□ -1.64
CCDC171-201ENST00000380701 DEFB116Q30KQ4 102 aa4.79□□□□□ -1.64
CCDC171-201ENST00000380701 C1orf195Q5TG92 126 aa4.79□□□□□ -1.64
CCDC171-201ENST00000380701 Q96NJ1 140 aa4.79□□□□□ -1.64
CCDC171-201ENST00000380701 AGRNO00468 2067 aa4.79□□□□□ -1.64
CCDC171-201ENST00000380701 EML5Q05BV3 1969 aa4.78□□□□□ -1.64
CCDC171-201ENST00000380701 PMAIP1Q13794 54 aa4.78□□□□□ -1.64
CCDC171-201ENST00000380701 CDIP1Q9H305 208 aa4.78□□□□□ -1.64
CCDC171-201ENST00000380701 ZNF575Q86XF7 245 aa4.78□□□□□ -1.64
CCDC171-201ENST00000380701 KRTAP10-11P60412 298 aa4.77□□□□□ -1.65
CCDC171-201ENST00000380701 F8P00451 2351 aa4.77□□□□□ -1.65
CCDC171-201ENST00000380701 SOSTDC1Q6X4U4 206 aa4.77□□□□□ -1.65
CCDC171-201ENST00000380701 LINC00528Q8N1L1 170 aa4.76□□□□□ -1.65
CCDC171-201ENST00000380701 APLNQ9ULZ1 77 aa4.76□□□□□ -1.65
CCDC171-201ENST00000380701 RBM12B-AS1Q9P1G2 102 aa4.76□□□□□ -1.65
CCDC171-201ENST00000380701 A0A0U1RQV1 116 aa4.76□□□□□ -1.65
CCDC171-201ENST00000380701 PKD1L2Q7Z442 2459 aa4.75□□□□□ -1.65
CCDC171-201ENST00000380701 IGLV7-43P04211 117 aa4.75□□□□□ -1.65
CCDC171-201ENST00000380701 PTPRBP23467 1997 aa4.75□□□□□ -1.65
CCDC171-201ENST00000380701 WIPF1O43516 503 aa4.74□□□□□ -1.65
CCDC171-201ENST00000380701 CHTF8P0CG12 524 aa4.74□□□□□ -1.65
CCDC171-201ENST00000380701 CD164Q04900 197 aa4.74□□□□□ -1.65
CCDC171-201ENST00000380701 IGLV5-37A0A075B6J1 123 aa4.73□□□□□ -1.65
CCDC171-201ENST00000380701 C15orf56Q8N910 161 aa4.73□□□□□ -1.65
CCDC171-201ENST00000380701 A0A1B0GVX0 72 aa4.72□□□□□ -1.65
CCDC171-201ENST00000380701 RPS28P62857 69 aaKnown RBP4.72□□□□□ -1.65
CCDC171-201ENST00000380701 PSORS1C2Q9UIG4 136 aa4.72□□□□□ -1.65
CCDC171-201ENST00000380701 C8orf17Q9NRJ1 99 aa4.72□□□□□ -1.65
CCDC171-201ENST00000380701 PRR15Q8IV56 129 aa4.72□□□□□ -1.65
CCDC171-201ENST00000380701 FAM218AQ96MZ4 157 aa4.72□□□□□ -1.65
CCDC171-201ENST00000380701 LITAFQ99732 161 aa4.71□□□□□ -1.65
CCDC171-201ENST00000380701 SERTAD4-AS1Q5TG53 156 aa4.71□□□□□ -1.66
CCDC171-201ENST00000380701 SPTBN4Q9H254 2564 aa4.71□□□□□ -1.66
CCDC171-201ENST00000380701 KRTAP1-3Q8IUG1 177 aa4.71□□□□□ -1.66
CCDC171-201ENST00000380701 COL27A1Q8IZC6 1860 aaPredicted RBP4.7□□□□□ -1.66
CCDC171-201ENST00000380701 MUC4Q99102 2169 aa4.7□□□□□ -1.66
CCDC171-201ENST00000380701 PSPHP1O15172 72 aa4.7□□□□□ -1.66
CCDC171-201ENST00000380701 GIG44P09565 113 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms