RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 OCR1Q9BZK8 76 aa4.23□□□□□ -1.73
SCN2A-202ENST00000375427 PROK2Q9HC23 129 aa4.23□□□□□ -1.73
SCN2A-202ENST00000375427 NRXN2Q9P2S2 1712 aa4.23□□□□□ -1.73
SCN2A-202ENST00000375427 PINLYPA6NC86 204 aa4.23□□□□□ -1.73
SCN2A-202ENST00000375427 TRBV7-4A0A0J9YYF1 115 aa4.23□□□□□ -1.73
SCN2A-202ENST00000375427 POLR2KP53803 58 aaKnown RBP4.23□□□□□ -1.73
SCN2A-202ENST00000375427 IGLV5-37A0A075B6J1 123 aa4.23□□□□□ -1.73
SCN2A-202ENST00000375427 SPATA3Q8NHX4 192 aa4.23□□□□□ -1.73
SCN2A-202ENST00000375427 LOC110117498A0A087WWA1 95 aa4.22□□□□□ -1.73
SCN2A-202ENST00000375427 PRO0461Q9UI25 63 aa4.22□□□□□ -1.73
SCN2A-202ENST00000375427 IGLV5-48A0A075B6I7 105 aa4.22□□□□□ -1.73
SCN2A-202ENST00000375427 MRPL34Q9BQ48 92 aaKnown RBP4.22□□□□□ -1.73
SCN2A-202ENST00000375427 MAPK1IP1LQ8NDC0 245 aa4.21□□□□□ -1.73
SCN2A-202ENST00000375427 AMELXQ99217 191 aa4.21□□□□□ -1.73
SCN2A-202ENST00000375427 IGHV3OR16-9A0A0B4J2B5 98 aa4.21□□□□□ -1.74
SCN2A-202ENST00000375427 LINC00528Q8N1L1 170 aa4.21□□□□□ -1.74
SCN2A-202ENST00000375427 SPANXA2-OT1Q8N9U9 137 aa4.21□□□□□ -1.74
SCN2A-202ENST00000375427 IGLV2-18A0A075B6J9 118 aa4.21□□□□□ -1.74
SCN2A-202ENST00000375427 ADAMTS7Q9UKP4 1686 aa4.21□□□□□ -1.74
SCN2A-202ENST00000375427 CDC42SE2Q9NRR3 84 aa4.21□□□□□ -1.74
SCN2A-202ENST00000375427 Q96NJ1 140 aa4.21□□□□□ -1.74
SCN2A-202ENST00000375427 A8MWP4 228 aa4.2□□□□□ -1.74
SCN2A-202ENST00000375427 BPTFQ12830 3046 aa4.2□□□□□ -1.74
SCN2A-202ENST00000375427 CSAG1Q6PB30 78 aa4.2□□□□□ -1.74
SCN2A-202ENST00000375427 UNQ6190/PRO20217Q6UXQ8 127 aa4.2□□□□□ -1.74
SCN2A-202ENST00000375427 FAM104AQ969W3 186 aa4.2□□□□□ -1.74
SCN2A-202ENST00000375427 TP53TG3Q9ULZ0 132 aa4.2□□□□□ -1.74
SCN2A-202ENST00000375427 Q6ZSV7 163 aa4.19□□□□□ -1.74
SCN2A-202ENST00000375427 LY6G6CO95867 125 aa4.19□□□□□ -1.74
SCN2A-202ENST00000375427 PLA2G2CQ5R387 149 aa4.19□□□□□ -1.74
SCN2A-202ENST00000375427 TNS1Q9HBL0 1735 aaKnown RBP4.19□□□□□ -1.74
SCN2A-202ENST00000375427 M0R2N4 97 aa4.19□□□□□ -1.74
SCN2A-202ENST00000375427 IGLV2-8P01709 118 aa4.19□□□□□ -1.74
SCN2A-202ENST00000375427 ZNF575Q86XF7 245 aa4.19□□□□□ -1.74
SCN2A-202ENST00000375427 H7BZZ5 65 aa4.19□□□□□ -1.74
SCN2A-202ENST00000375427 IGLV3-1P01715 115 aa4.19□□□□□ -1.74
SCN2A-202ENST00000375427 H1FX-AS1Q4G0G2 97 aa4.19□□□□□ -1.74
SCN2A-202ENST00000375427 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
SCN2A-202ENST00000375427 Q6ZRP5 223 aa4.18□□□□□ -1.74
SCN2A-202ENST00000375427 C18orf65Q6ZTR6 163 aa4.18□□□□□ -1.74
SCN2A-202ENST00000375427 COL5A3P25940 1745 aaPredicted RBP4.18□□□□□ -1.74
SCN2A-202ENST00000375427 COL18A1P39060 1754 aa4.17□□□□□ -1.74
SCN2A-202ENST00000375427 Q6ZRX8 168 aa4.17□□□□□ -1.74
SCN2A-202ENST00000375427 IGLV2-11P01706 119 aa4.17□□□□□ -1.74
SCN2A-202ENST00000375427 OBSCN-AS1Q96MR7 158 aa4.17□□□□□ -1.74
SCN2A-202ENST00000375427 LINC01006Q8NI28 216 aa4.17□□□□□ -1.74
SCN2A-202ENST00000375427 BBC3Q96PG8 261 aaPredicted RBP4.17□□□□□ -1.74
SCN2A-202ENST00000375427 STAB2Q8WWQ8 2551 aa4.17□□□□□ -1.74
SCN2A-202ENST00000375427 Q75L30 129 aa4.16□□□□□ -1.74
SCN2A-202ENST00000375427 LINC00242Q5T6M2 205 aa4.16□□□□□ -1.74
SCN2A-202ENST00000375427 TFF2Q03403 129 aa4.16□□□□□ -1.74
SCN2A-202ENST00000375427 IGIPA6NJ69 53 aa4.16□□□□□ -1.74
SCN2A-202ENST00000375427 Q8N7P7 452 aa4.16□□□□□ -1.74
SCN2A-202ENST00000375427 SMCR5Q8TEV8 140 aa4.16□□□□□ -1.74
SCN2A-202ENST00000375427 K7EQZ3 153 aa4.15□□□□□ -1.74
SCN2A-202ENST00000375427 ADAMTSL4-AS1Q5T5F5 129 aa4.15□□□□□ -1.74
SCN2A-202ENST00000375427 A8MTW9 85 aa4.15□□□□□ -1.74
SCN2A-202ENST00000375427 HRES1P13985 223 aa4.15□□□□□ -1.75
SCN2A-202ENST00000375427 MGAM2Q2M2H8 2515 aa4.15□□□□□ -1.75
SCN2A-202ENST00000375427 DEFB114Q30KQ6 69 aa4.15□□□□□ -1.75
SCN2A-202ENST00000375427 WDR90Q96KV7 1748 aa4.15□□□□□ -1.75
SCN2A-202ENST00000375427 ROMO1P60602 79 aa4.15□□□□□ -1.75
SCN2A-202ENST00000375427 ODF3BA8MYP8 253 aa4.15□□□□□ -1.75
SCN2A-202ENST00000375427 IGLV1-44P01699 117 aa4.14□□□□□ -1.75
SCN2A-202ENST00000375427 TYMSOSQ8TAI1 123 aa4.14□□□□□ -1.75
SCN2A-202ENST00000375427 FBXL19-AS1Q494R0 122 aa4.14□□□□□ -1.75
SCN2A-202ENST00000375427 CNFNQ9BYD5 112 aa4.14□□□□□ -1.75
SCN2A-202ENST00000375427 A0A1B0GU33 70 aa4.14□□□□□ -1.75
SCN2A-202ENST00000375427 A0A1B0GUV1 79 aa4.14□□□□□ -1.75
SCN2A-202ENST00000375427 LINC00167Q96N53 147 aa4.14□□□□□ -1.75
SCN2A-202ENST00000375427 K7EQG2 157 aa4.14□□□□□ -1.75
SCN2A-202ENST00000375427 CDSNQ15517 529 aa4.14□□□□□ -1.75
SCN2A-202ENST00000375427 DEFB1P60022 68 aa4.14□□□□□ -1.75
SCN2A-202ENST00000375427 RTL8CO15255 209 aa4.13□□□□□ -1.75
SCN2A-202ENST00000375427 PIEZO2Q9H5I5 2752 aa4.13□□□□□ -1.75
SCN2A-202ENST00000375427 ZNF503-AS2A6NEH8 195 aa4.13□□□□□ -1.75
SCN2A-202ENST00000375427 SPRNQ5BIV9 151 aa4.13□□□□□ -1.75
SCN2A-202ENST00000375427 INAFM1C9JVW0 142 aa4.12□□□□□ -1.75
SCN2A-202ENST00000375427 CHD6Q8TD26 2715 aa4.12□□□□□ -1.75
SCN2A-202ENST00000375427 CSRP3P50461 194 aa4.12□□□□□ -1.75
SCN2A-202ENST00000375427 C16orf90A8MZG2 172 aa4.12□□□□□ -1.75
SCN2A-202ENST00000375427 LINC01558Q9Y6Z2 57 aa4.12□□□□□ -1.75
SCN2A-202ENST00000375427 NOTCH1P46531 2555 aa4.12□□□□□ -1.75
SCN2A-202ENST00000375427 Q8NAQ8 132 aa4.12□□□□□ -1.75
SCN2A-202ENST00000375427 IGLV1-50A0A075B6I6 118 aa4.12□□□□□ -1.75
SCN2A-202ENST00000375427 PROK1P58294 105 aa4.11□□□□□ -1.75
SCN2A-202ENST00000375427 C22orf24Q9Y442 160 aa4.11□□□□□ -1.75
SCN2A-202ENST00000375427 Q8N9P0 234 aaPredicted RBP4.11□□□□□ -1.75
SCN2A-202ENST00000375427 FP248Q71RG6 208 aaPredicted RBP4.11□□□□□ -1.75
SCN2A-202ENST00000375427 ASB16-AS1Q495Z4 193 aa4.1□□□□□ -1.75
SCN2A-202ENST00000375427 KIF25-AS1Q9Y6Z4 181 aa4.09□□□□□ -1.75
SCN2A-202ENST00000375427 CRIP1P50238 77 aa4.09□□□□□ -1.75
SCN2A-202ENST00000375427 CENPEQ02224 2701 aa4.09□□□□□ -1.75
SCN2A-202ENST00000375427 ATRQ13535 2644 aa4.08□□□□□ -1.76
SCN2A-202ENST00000375427 KLLNB2CW77 178 aa4.08□□□□□ -1.76
SCN2A-202ENST00000375427 AKAP13Q12802 2813 aa4.08□□□□□ -1.76
SCN2A-202ENST00000375427 TNP2Q05952 138 aa4.08□□□□□ -1.76
SCN2A-202ENST00000375427 NBEAL1Q6ZS30 2694 aa4.08□□□□□ -1.76
SCN2A-202ENST00000375427 ST20-AS1Q8NBB2 130 aa4.07□□□□□ -1.76
SCN2A-202ENST00000375427 NSD1Q96L73 2696 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms