RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 C5orf42Q9H799 3197 aa13.45□□□□□ -0.26
TGFBR1-201ENST00000374990 TRBV7-6A0A0J9YX20 115 aa13.44□□□□□ -0.26
TGFBR1-201ENST00000374990 C6orf48Q9UBA6 75 aa13.44□□□□□ -0.26
TGFBR1-201ENST00000374990 ESRGQ1W209 222 aa13.44□□□□□ -0.26
TGFBR1-201ENST00000374990 BPTFQ12830 3046 aa13.42□□□□□ -0.26
TGFBR1-201ENST00000374990 A0A087WSZ3 146 aa13.42□□□□□ -0.26
TGFBR1-201ENST00000374990 PRR4Q16378 134 aa13.42□□□□□ -0.26
TGFBR1-201ENST00000374990 Q9BRP9 147 aa13.42□□□□□ -0.26
TGFBR1-201ENST00000374990 TRANK1O15050 2925 aa13.41□□□□□ -0.26
TGFBR1-201ENST00000374990 C22orf24Q9Y442 160 aa13.4□□□□□ -0.26
TGFBR1-201ENST00000374990 BCE1O60756 84 aa13.4□□□□□ -0.26
TGFBR1-201ENST00000374990 LY6G6CO95867 125 aa13.4□□□□□ -0.26
TGFBR1-201ENST00000374990 LINC00208Q96KT6 92 aa13.4□□□□□ -0.26
TGFBR1-201ENST00000374990 FLNAP21333 2647 aaKnown RBP13.4□□□□□ -0.26
TGFBR1-201ENST00000374990 A0A1B0GW54 56 aa13.4□□□□□ -0.26
TGFBR1-201ENST00000374990 A0A096LNT2 108 aa13.39□□□□□ -0.27
TGFBR1-201ENST00000374990 Q8NAQ8 132 aa13.39□□□□□ -0.27
TGFBR1-201ENST00000374990 TMEM254Q8TBM7 123 aa13.39□□□□□ -0.27
TGFBR1-201ENST00000374990 HRCT1Q6UXD1 115 aa13.39□□□□□ -0.27
TGFBR1-201ENST00000374990 SPATA3Q8NHX4 192 aa13.38□□□□□ -0.27
TGFBR1-201ENST00000374990 SPTSSBQ8NFR3 76 aa13.36□□□□□ -0.27
TGFBR1-201ENST00000374990 ATRQ13535 2644 aa13.36□□□□□ -0.27
TGFBR1-201ENST00000374990 GVQW2A0A096LPI5 108 aaPredicted RBP13.34□□□□□ -0.27
TGFBR1-201ENST00000374990 ELOF1P60002 83 aaKnown RBP13.34□□□□□ -0.27
TGFBR1-201ENST00000374990 CSNK1G2-AS1Q8NCQ2 148 aa13.34□□□□□ -0.27
TGFBR1-201ENST00000374990 CRYGAP11844 174 aa13.34□□□□□ -0.27
TGFBR1-201ENST00000374990 NHLRC4P0CG21 123 aaPredicted RBP13.32□□□□□ -0.28
TGFBR1-201ENST00000374990 KIAA0087Q14695 138 aa13.32□□□□□ -0.28
TGFBR1-201ENST00000374990 MAST4O15021 2626 aa13.32□□□□□ -0.28
TGFBR1-201ENST00000374990 LINC00167Q96N53 147 aa13.32□□□□□ -0.28
TGFBR1-201ENST00000374990 ITPR3Q14573 2671 aa13.31□□□□□ -0.28
TGFBR1-201ENST00000374990 PRLHP81277 87 aa13.31□□□□□ -0.28
TGFBR1-201ENST00000374990 SMCR5Q8TEV8 140 aa13.31□□□□□ -0.28
TGFBR1-201ENST00000374990 LOC110117498A0A087WWA1 95 aa13.3□□□□□ -0.28
TGFBR1-201ENST00000374990 PRR15LQ9BU68 103 aa13.3□□□□□ -0.28
TGFBR1-201ENST00000374990 HCG22E2RYF7 251 aa13.28□□□□□ -0.28
TGFBR1-201ENST00000374990 ZNF292O60281 2723 aa13.28□□□□□ -0.28
TGFBR1-201ENST00000374990 Q6ZQT0 140 aa13.28□□□□□ -0.28
TGFBR1-201ENST00000374990 IGLV5-52A0A0A0MRZ9 124 aa13.28□□□□□ -0.28
TGFBR1-201ENST00000374990 HELZ2Q9BYK8 2649 aaKnown RBP13.26□□□□□ -0.29
TGFBR1-201ENST00000374990 A6NED7 52 aa13.25□□□□□ -0.29
TGFBR1-201ENST00000374990 A0A0U1RQV1 116 aa13.25□□□□□ -0.29
TGFBR1-201ENST00000374990 C19orf73Q9NVV2 129 aa13.24□□□□□ -0.29
TGFBR1-201ENST00000374990 Q6ZRX8 168 aa13.23□□□□□ -0.29
TGFBR1-201ENST00000374990 KRTAP24-1Q3LI83 254 aa13.23□□□□□ -0.29
TGFBR1-201ENST00000374990 CFAP46Q8IYW2 2715 aa13.23□□□□□ -0.29
TGFBR1-201ENST00000374990 A0A0C4DFX4 3053 aa13.23□□□□□ -0.29
TGFBR1-201ENST00000374990 Q8NBF4 154 aa13.22□□□□□ -0.29
TGFBR1-201ENST00000374990 C1orf134Q5TEV5 83 aa13.22□□□□□ -0.29
TGFBR1-201ENST00000374990 IGHV6-1A0A0B4J1U7 121 aa13.22□□□□□ -0.29
TGFBR1-201ENST00000374990 CIRBP-AS1Q8TBR5 109 aa13.22□□□□□ -0.29
TGFBR1-201ENST00000374990 IGLV6-57P01721 117 aa13.22□□□□□ -0.29
TGFBR1-201ENST00000374990 GIG44P09565 113 aaPredicted RBP13.22□□□□□ -0.29
TGFBR1-201ENST00000374990 EIF4EBP3O60516 100 aaPredicted RBP13.22□□□□□ -0.29
TGFBR1-201ENST00000374990 hDV103S1A0JD37 113 aa13.21□□□□□ -0.29
TGFBR1-201ENST00000374990 H0Y9P7 68 aa13.2□□□□□ -0.3
TGFBR1-201ENST00000374990 LINC00612Q8N6U2 182 aa13.2□□□□□ -0.3
TGFBR1-201ENST00000374990 VPREB1P12018 145 aa13.19□□□□□ -0.3
TGFBR1-201ENST00000374990 SVIPQ8NHG7 77 aa13.19□□□□□ -0.3
TGFBR1-201ENST00000374990 DEFB116Q30KQ4 102 aa13.19□□□□□ -0.3
TGFBR1-201ENST00000374990 DNAH10OSP0CZ25 163 aa13.18□□□□□ -0.3
TGFBR1-201ENST00000374990 PRR34Q9NV39 138 aa13.17□□□□□ -0.3
TGFBR1-201ENST00000374990 RPS28P62857 69 aaKnown RBP13.17□□□□□ -0.3
TGFBR1-201ENST00000374990 K7ERS5 55 aa13.15□□□□□ -0.3
TGFBR1-201ENST00000374990 LINC00588Q9Y4M8 146 aa13.15□□□□□ -0.3
TGFBR1-201ENST00000374990 ZNF575Q86XF7 245 aa13.14□□□□□ -0.31
TGFBR1-201ENST00000374990 MDFIQ99750 246 aa13.13□□□□□ -0.31
TGFBR1-201ENST00000374990 SMIM29Q86T20 159 aa13.13□□□□□ -0.31
TGFBR1-201ENST00000374990 Q6ZRP5 223 aa13.12□□□□□ -0.31
TGFBR1-201ENST00000374990 LAMA3Q16787 3333 aa13.12□□□□□ -0.31
TGFBR1-201ENST00000374990 C16orf90A8MZG2 172 aa13.11□□□□□ -0.31
TGFBR1-201ENST00000374990 MGAQ8IWI9 3026 aa13.11□□□□□ -0.31
TGFBR1-201ENST00000374990 CFAP54Q96N23 3096 aa13.11□□□□□ -0.31
TGFBR1-201ENST00000374990 LINC00476Q8WZB0 136 aa13.09□□□□□ -0.31
TGFBR1-201ENST00000374990 PCOTHQ58A44 107 aa13.09□□□□□ -0.31
TGFBR1-201ENST00000374990 AKAP13Q12802 2813 aa13.08□□□□□ -0.32
TGFBR1-201ENST00000374990 LAMA2P24043 3122 aaKnown RBP13.08□□□□□ -0.32
TGFBR1-201ENST00000374990 C1orf64Q8NEQ6 169 aa13.08□□□□□ -0.32
TGFBR1-201ENST00000374990 TP53AIP1Q9HCN2 124 aa13.07□□□□□ -0.32
TGFBR1-201ENST00000374990 LINC00528Q8N1L1 170 aa13.06□□□□□ -0.32
TGFBR1-201ENST00000374990 KCNQ1DNQ9H478 68 aa13.06□□□□□ -0.32
TGFBR1-201ENST00000374990 C1orf195Q5TG92 126 aa13.06□□□□□ -0.32
TGFBR1-201ENST00000374990 MKI67P46013 3256 aaKnown RBP13.05□□□□□ -0.32
TGFBR1-201ENST00000374990 TRBV7-4A0A0J9YYF1 115 aa13.04□□□□□ -0.32
TGFBR1-201ENST00000374990 NBDYA0A0U1RRE5 68 aa13.04□□□□□ -0.32
TGFBR1-201ENST00000374990 H3BPC8 53 aa13.03□□□□□ -0.32
TGFBR1-201ENST00000374990 LIMD2Q9BT23 127 aa13.03□□□□□ -0.32
TGFBR1-201ENST00000374990 ST20-AS1Q8NBB2 130 aa13.02□□□□□ -0.33
TGFBR1-201ENST00000374990 KRTAP1-3Q8IUG1 177 aa13.01□□□□□ -0.33
TGFBR1-201ENST00000374990 EPM2AB3EWF7 344 aa13□□□□□ -0.33
TGFBR1-201ENST00000374990 PHF5AQ7RTV0 110 aaKnown RBP13□□□□□ -0.33
TGFBR1-201ENST00000374990 TM2D3Q9BRN9 247 aa12.99□□□□□ -0.33
TGFBR1-201ENST00000374990 PSPHP1O15172 72 aa12.98□□□□□ -0.33
TGFBR1-201ENST00000374990 MOBPQ13875 183 aa12.97□□□□□ -0.33
TGFBR1-201ENST00000374990 IGLV1-50A0A075B6I6 118 aa12.97□□□□□ -0.33
TGFBR1-201ENST00000374990 PMAIP1Q13794 54 aa12.95□□□□□ -0.34
TGFBR1-201ENST00000374990 ERC2-IT1O76042 136 aa12.95□□□□□ -0.34
TGFBR1-201ENST00000374990 SERTAD4-AS1Q5TG53 156 aa12.95□□□□□ -0.34
TGFBR1-201ENST00000374990 C15orf56Q8N910 161 aa12.95□□□□□ -0.34
TGFBR1-201ENST00000374990 CHD6Q8TD26 2715 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms