RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 ERG28Q9UKR5 140 aa7.13□□□□□ -1.27
HLA-DQA1-202ENST00000374949 PFN2P35080 140 aa7.12□□□□□ -1.27
HLA-DQA1-202ENST00000374949 C10orf25Q5T742 122 aa7.12□□□□□ -1.27
HLA-DQA1-202ENST00000374949 COPS9Q8WXC6 57 aa7.12□□□□□ -1.27
HLA-DQA1-202ENST00000374949 TRBV30A0A0K0K1B3 111 aa7.11□□□□□ -1.27
HLA-DQA1-202ENST00000374949 SYCNQ0VAF6 134 aa7.11□□□□□ -1.27
HLA-DQA1-202ENST00000374949 C14orf177Q52M58 125 aa7.11□□□□□ -1.27
HLA-DQA1-202ENST00000374949 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 LRCOL1A6NCL2 159 aa7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 A6NDN8 102 aa7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 A6NJY4 79 aa7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 LECT2O14960 151 aa7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 FXYD2P54710 66 aa7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 RPL24P83731 157 aaKnown RBP7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 C9orf116Q5BN46 136 aaPredicted RBP7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 Q6ZRU5 148 aa7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 MIR7-3HGQ8N6C7 128 aa7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 DAND5Q8N907 189 aa7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 LINC00308Q8TCZ7 52 aa7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 FAM30AQ9NZY2 134 aa7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 C6orf48Q9UBA6 75 aa7.1□□□□□ -1.27
HLA-DQA1-202ENST00000374949 UBR4Q5T4S7 5183 aa7.09□□□□□ -1.27
HLA-DQA1-202ENST00000374949 NPC2P61916 151 aa7.09□□□□□ -1.27
HLA-DQA1-202ENST00000374949 RNF151Q2KHN1 245 aa7.09□□□□□ -1.27
HLA-DQA1-202ENST00000374949 LBHQ53QV2 105 aaPredicted RBP7.08□□□□□ -1.28
HLA-DQA1-202ENST00000374949 COL5A1-AS1Q5SY13 56 aa7.08□□□□□ -1.28
HLA-DQA1-202ENST00000374949 Q8N814 137 aa7.08□□□□□ -1.28
HLA-DQA1-202ENST00000374949 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
HLA-DQA1-202ENST00000374949 HMCN2Q8NDA2 5059 aa7.08□□□□□ -1.28
HLA-DQA1-202ENST00000374949 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.07□□□□□ -1.28
HLA-DQA1-202ENST00000374949 A4D1N5 150 aa7.07□□□□□ -1.28
HLA-DQA1-202ENST00000374949 SLPIP03973 132 aa7.07□□□□□ -1.28
HLA-DQA1-202ENST00000374949 WFDC2Q14508 124 aa7.07□□□□□ -1.28
HLA-DQA1-202ENST00000374949 CARD19Q96LW7 228 aa7.07□□□□□ -1.28
HLA-DQA1-202ENST00000374949 NHP2Q9NX24 153 aaKnown RBP7.07□□□□□ -1.28
HLA-DQA1-202ENST00000374949 SOSTDC1Q6X4U4 206 aa7.06□□□□□ -1.28
HLA-DQA1-202ENST00000374949 LINC00528Q8N1L1 170 aa7.06□□□□□ -1.28
HLA-DQA1-202ENST00000374949 LOC107984156A0A0G2JMH3 177 aa7.05□□□□□ -1.28
HLA-DQA1-202ENST00000374949 A0A1B0GWB2 263 aa7.05□□□□□ -1.28
HLA-DQA1-202ENST00000374949 KRTAP29-1A8MX34 341 aaPredicted RBP7.05□□□□□ -1.28
HLA-DQA1-202ENST00000374949 EIF4EBP3O60516 100 aaPredicted RBP7.05□□□□□ -1.28
HLA-DQA1-202ENST00000374949 PLA2G1BP04054 148 aaKnown RBP7.05□□□□□ -1.28
HLA-DQA1-202ENST00000374949 CFC1BP0CG36 223 aa7.05□□□□□ -1.28
HLA-DQA1-202ENST00000374949 CFC1P0CG37 223 aa7.05□□□□□ -1.28
HLA-DQA1-202ENST00000374949 CNBPP62633 177 aaKnown RBP7.05□□□□□ -1.28
HLA-DQA1-202ENST00000374949 ARL17AQ8IVW1 177 aa7.05□□□□□ -1.28
HLA-DQA1-202ENST00000374949 SND1-IT1Q9HBX3 110 aa7.05□□□□□ -1.28
HLA-DQA1-202ENST00000374949 NDUFC2-KCTD14E9PQ53 114 aa7.04□□□□□ -1.28
HLA-DQA1-202ENST00000374949 TLX1NBP0CAT3 122 aa7.04□□□□□ -1.28
HLA-DQA1-202ENST00000374949 RAB37Q96AX2 223 aa7.04□□□□□ -1.28
HLA-DQA1-202ENST00000374949 DNAH8Q96JB1 4490 aa7.04□□□□□ -1.28
HLA-DQA1-202ENST00000374949 Q6ZSA8 131 aa7.03□□□□□ -1.28
HLA-DQA1-202ENST00000374949 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.02□□□□□ -1.29
HLA-DQA1-202ENST00000374949 A0A0B4J2C4 111 aa7.02□□□□□ -1.29
HLA-DQA1-202ENST00000374949 TAX1BP3O14907 124 aa7.02□□□□□ -1.29
HLA-DQA1-202ENST00000374949 PRO1854Q9UHT4 67 aa7.02□□□□□ -1.29
HLA-DQA1-202ENST00000374949 LRP1Q07954 4544 aaKnown RBP7.02□□□□□ -1.29
HLA-DQA1-202ENST00000374949 LOC107984640A0A0U1RRK4 108 aa7.01□□□□□ -1.29
HLA-DQA1-202ENST00000374949 K7ERJ3 54 aa7.01□□□□□ -1.29
HLA-DQA1-202ENST00000374949 NDUFC2O95298 119 aa7.01□□□□□ -1.29
HLA-DQA1-202ENST00000374949 LINC01620Q4KN68 170 aa7.01□□□□□ -1.29
HLA-DQA1-202ENST00000374949 GAGE2EQ4V326 116 aa7.01□□□□□ -1.29
HLA-DQA1-202ENST00000374949 Q6ZRP5 223 aa7.01□□□□□ -1.29
HLA-DQA1-202ENST00000374949 GAGE2DQ9UEU5 116 aa7.01□□□□□ -1.29
HLA-DQA1-202ENST00000374949 RPL18AQ02543 176 aaKnown RBP7□□□□□ -1.29
HLA-DQA1-202ENST00000374949 SCXQ7RTU7 201 aa7□□□□□ -1.29
HLA-DQA1-202ENST00000374949 XAGE1AQ9HD64 81 aa7□□□□□ -1.29
HLA-DQA1-202ENST00000374949 TRAV13-2A0A0B4J235 113 aa6.99□□□□□ -1.29
HLA-DQA1-202ENST00000374949 C9orf118A6NHY6 69 aa6.99□□□□□ -1.29
HLA-DQA1-202ENST00000374949 SERTAD4-AS1Q5TG53 156 aa6.99□□□□□ -1.29
HLA-DQA1-202ENST00000374949 C9orf163Q8N9P6 203 aa6.99□□□□□ -1.29
HLA-DQA1-202ENST00000374949 PKIGQ9Y2B9 76 aa6.99□□□□□ -1.29
HLA-DQA1-202ENST00000374949 IGKV2-28A0A075B6P5 120 aa6.98□□□□□ -1.29
HLA-DQA1-202ENST00000374949 IGKV2D-28P01615 120 aa6.98□□□□□ -1.29
HLA-DQA1-202ENST00000374949 KRTAP10-4P60372 401 aaPredicted RBP6.98□□□□□ -1.29
HLA-DQA1-202ENST00000374949 GAGE2BQ13066 116 aa6.98□□□□□ -1.29
HLA-DQA1-202ENST00000374949 PLA2G2DQ9UNK4 145 aa6.98□□□□□ -1.29
HLA-DQA1-202ENST00000374949 PRR3P79522 188 aaKnown RBP6.97□□□□□ -1.29
HLA-DQA1-202ENST00000374949 C9orf129Q5T035 196 aaKnown RBP6.97□□□□□ -1.29
HLA-DQA1-202ENST00000374949 H3BUT2 72 aa6.96□□□□□ -1.3
HLA-DQA1-202ENST00000374949 H7C2G1 150 aa6.96□□□□□ -1.3
HLA-DQA1-202ENST00000374949 RPL13AP40429 203 aaKnown RBP6.96□□□□□ -1.3
HLA-DQA1-202ENST00000374949 OR13C6PQ8NH95 151 aa6.96□□□□□ -1.3
HLA-DQA1-202ENST00000374949 TRBV10-2A0A0K0K1G8 114 aa6.95□□□□□ -1.3
HLA-DQA1-202ENST00000374949 TSPAN13O95857 204 aa6.95□□□□□ -1.3
HLA-DQA1-202ENST00000374949 Q1RN00 199 aa6.95□□□□□ -1.3
HLA-DQA1-202ENST00000374949 LINC00337Q8N6G1 96 aa6.95□□□□□ -1.3
HLA-DQA1-202ENST00000374949 Q8NDZ9 215 aa6.95□□□□□ -1.3
HLA-DQA1-202ENST00000374949 FAT3Q8TDW7 4589 aa6.94□□□□□ -1.3
HLA-DQA1-202ENST00000374949 NCR3O14931 201 aa6.94□□□□□ -1.3
HLA-DQA1-202ENST00000374949 VPREB1P12018 145 aa6.94□□□□□ -1.3
HLA-DQA1-202ENST00000374949 SDIM1Q6ZPB5 146 aa6.94□□□□□ -1.3
HLA-DQA1-202ENST00000374949 CIRBP-AS1Q8TBR5 109 aa6.94□□□□□ -1.3
HLA-DQA1-202ENST00000374949 NAA38Q9BRA0 125 aaKnown RBP6.94□□□□□ -1.3
HLA-DQA1-202ENST00000374949 A0A096LNI7 61 aa6.93□□□□□ -1.3
HLA-DQA1-202ENST00000374949 A0A1B0GV90 55 aa6.93□□□□□ -1.3
HLA-DQA1-202ENST00000374949 A0A1W2PPM0 123 aa6.93□□□□□ -1.3
HLA-DQA1-202ENST00000374949 M0R378 163 aa6.93□□□□□ -1.3
HLA-DQA1-202ENST00000374949 OXTP01178 125 aa6.93□□□□□ -1.3
HLA-DQA1-202ENST00000374949 PSMB2P49721 201 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms