RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 TLX1NBP0CAT3 122 aa6.99□□□□□ -1.29
LCN1-202ENST00000371781 COX17Q14061 63 aa6.99□□□□□ -1.29
LCN1-202ENST00000371781 LINC01620Q4KN68 170 aa6.99□□□□□ -1.29
LCN1-202ENST00000371781 C9orf129Q5T035 196 aaKnown RBP6.99□□□□□ -1.29
LCN1-202ENST00000371781 Q6ZVH6 145 aa6.99□□□□□ -1.29
LCN1-202ENST00000371781 ARL17AQ8IVW1 177 aa6.99□□□□□ -1.29
LCN1-202ENST00000371781 XAGE1AQ9HD64 81 aa6.99□□□□□ -1.29
LCN1-202ENST00000371781 APOBP04114 4563 aaKnown RBP6.99□□□□□ -1.29
LCN1-202ENST00000371781 IGKV2-28A0A075B6P5 120 aa6.98□□□□□ -1.29
LCN1-202ENST00000371781 NDUFC2-KCTD14E9PQ53 114 aa6.98□□□□□ -1.29
LCN1-202ENST00000371781 IGKV2D-28P01615 120 aa6.98□□□□□ -1.29
LCN1-202ENST00000371781 CFC1BP0CG36 223 aa6.98□□□□□ -1.29
LCN1-202ENST00000371781 CFC1P0CG37 223 aa6.98□□□□□ -1.29
LCN1-202ENST00000371781 IFITM1P13164 125 aa6.98□□□□□ -1.29
LCN1-202ENST00000371781 CIRBPQ14011 172 aaKnown RBP6.98□□□□□ -1.29
LCN1-202ENST00000371781 KRTAP7-1Q8IUC3 87 aa6.98□□□□□ -1.29
LCN1-202ENST00000371781 PPDPFQ9H3Y8 114 aa6.98□□□□□ -1.29
LCN1-202ENST00000371781 C14orf177Q52M58 125 aa6.97□□□□□ -1.29
LCN1-202ENST00000371781 NHP2Q9NX24 153 aaKnown RBP6.97□□□□□ -1.29
LCN1-202ENST00000371781 A0A096LNI7 61 aa6.96□□□□□ -1.3
LCN1-202ENST00000371781 PANO1I0J062 215 aa6.96□□□□□ -1.3
LCN1-202ENST00000371781 TAX1BP3O14907 124 aa6.96□□□□□ -1.3
LCN1-202ENST00000371781 KRTAP10-2P60368 255 aa6.96□□□□□ -1.3
LCN1-202ENST00000371781 LINC00337Q8N6G1 96 aa6.96□□□□□ -1.3
LCN1-202ENST00000371781 C9orf163Q8N9P6 203 aa6.96□□□□□ -1.3
LCN1-202ENST00000371781 CHTF8P0CG12 524 aa6.95□□□□□ -1.3
LCN1-202ENST00000371781 PRR3P79522 188 aaKnown RBP6.95□□□□□ -1.3
LCN1-202ENST00000371781 RPL18AQ02543 176 aaKnown RBP6.95□□□□□ -1.3
LCN1-202ENST00000371781 GAGE2EQ4V326 116 aa6.95□□□□□ -1.3
LCN1-202ENST00000371781 SERTAD4-AS1Q5TG53 156 aa6.95□□□□□ -1.3
LCN1-202ENST00000371781 GAGE2DQ9UEU5 116 aa6.95□□□□□ -1.3
LCN1-202ENST00000371781 A0A0B4J2C4 111 aa6.94□□□□□ -1.3
LCN1-202ENST00000371781 FAM168BA1KXE4 195 aa6.94□□□□□ -1.3
LCN1-202ENST00000371781 VPREB1P12018 145 aa6.94□□□□□ -1.3
LCN1-202ENST00000371781 RPL24P83731 157 aaKnown RBP6.94□□□□□ -1.3
LCN1-202ENST00000371781 LOC107984640A0A0U1RRK4 108 aa6.93□□□□□ -1.3
LCN1-202ENST00000371781 SDIM1Q6ZPB5 146 aa6.93□□□□□ -1.3
LCN1-202ENST00000371781 NAA38Q9BRA0 125 aaKnown RBP6.93□□□□□ -1.3
LCN1-202ENST00000371781 NCR3O14931 201 aa6.92□□□□□ -1.3
LCN1-202ENST00000371781 GAGE2BQ13066 116 aa6.92□□□□□ -1.3
LCN1-202ENST00000371781 RAB37Q96AX2 223 aa6.92□□□□□ -1.3
LCN1-202ENST00000371781 ABCA13Q86UQ4 5058 aa6.92□□□□□ -1.3
LCN1-202ENST00000371781 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.91□□□□□ -1.3
LCN1-202ENST00000371781 TMEM238LA0A1B0GVL6 79 aa6.91□□□□□ -1.3
LCN1-202ENST00000371781 A6NDN8 102 aa6.91□□□□□ -1.3
LCN1-202ENST00000371781 A6NJY4 79 aa6.91□□□□□ -1.3
LCN1-202ENST00000371781 NDUFC2O95298 119 aa6.91□□□□□ -1.3
LCN1-202ENST00000371781 TSPAN13O95857 204 aa6.91□□□□□ -1.3
LCN1-202ENST00000371781 COL5A1-AS1Q5SY13 56 aa6.91□□□□□ -1.3
LCN1-202ENST00000371781 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.91□□□□□ -1.3
LCN1-202ENST00000371781 IGKV2-24A0A0C4DH68 120 aa6.9□□□□□ -1.3
LCN1-202ENST00000371781 A0A1B0GVY2 172 aa6.9□□□□□ -1.3
LCN1-202ENST00000371781 A0A1W2PNN7 141 aa6.9□□□□□ -1.3
LCN1-202ENST00000371781 C16orf90A8MZG2 172 aa6.9□□□□□ -1.3
LCN1-202ENST00000371781 RPL13AP40429 203 aaKnown RBP6.9□□□□□ -1.3
LCN1-202ENST00000371781 IGLV5-37A0A075B6J1 123 aa6.89□□□□□ -1.31
LCN1-202ENST00000371781 IGLV5-52A0A0A0MRZ9 124 aa6.89□□□□□ -1.31
LCN1-202ENST00000371781 PGPEP1Q9NXJ5 209 aa6.89□□□□□ -1.31
LCN1-202ENST00000371781 PLA2G2DQ9UNK4 145 aa6.89□□□□□ -1.31
LCN1-202ENST00000371781 SPACA4Q8TDM5 124 aa6.88□□□□□ -1.31
LCN1-202ENST00000371781 COPS9Q8WXC6 57 aa6.88□□□□□ -1.31
LCN1-202ENST00000371781 PRO1854Q9UHT4 67 aa6.88□□□□□ -1.31
LCN1-202ENST00000371781 KRTAP10-1P60331 282 aa6.87□□□□□ -1.31
LCN1-202ENST00000371781 FAM19A5Q7Z5A7 132 aaPredicted RBP6.87□□□□□ -1.31
LCN1-202ENST00000371781 C7orf33Q8WU49 177 aa6.87□□□□□ -1.31
LCN1-202ENST00000371781 TRBV10-2A0A0K0K1G8 114 aa6.86□□□□□ -1.31
LCN1-202ENST00000371781 A0A1B0GV90 55 aa6.86□□□□□ -1.31
LCN1-202ENST00000371781 C9orf118A6NHY6 69 aa6.86□□□□□ -1.31
LCN1-202ENST00000371781 EPM2AB3EWF7 344 aa6.86□□□□□ -1.31
LCN1-202ENST00000371781 H7C2G1 150 aa6.86□□□□□ -1.31
LCN1-202ENST00000371781 IGLV6-57P01721 117 aa6.86□□□□□ -1.31
LCN1-202ENST00000371781 LBHQ53QV2 105 aaPredicted RBP6.86□□□□□ -1.31
LCN1-202ENST00000371781 LINC00336Q6ZUF6 198 aa6.86□□□□□ -1.31
LCN1-202ENST00000371781 KRTAP11-1Q8IUC1 163 aa6.86□□□□□ -1.31
LCN1-202ENST00000371781 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
LCN1-202ENST00000371781 FAM30AQ9NZY2 134 aa6.86□□□□□ -1.31
LCN1-202ENST00000371781 TRBV10-3A0A0K0K1G6 114 aa6.85□□□□□ -1.31
LCN1-202ENST00000371781 H3BUT2 72 aa6.85□□□□□ -1.31
LCN1-202ENST00000371781 TRAV13-2A0A0B4J235 113 aa6.84□□□□□ -1.31
LCN1-202ENST00000371781 GAGE10A6NGK3 116 aa6.84□□□□□ -1.31
LCN1-202ENST00000371781 TRIAP1O43715 76 aa6.84□□□□□ -1.31
LCN1-202ENST00000371781 SMIM11BQ8TCY0 68 aa6.84□□□□□ -1.31
LCN1-202ENST00000371781 C22orf24Q9Y442 160 aa6.84□□□□□ -1.31
LCN1-202ENST00000371781 M0R378 163 aa6.83□□□□□ -1.32
LCN1-202ENST00000371781 FAT1Q14517 4588 aa6.83□□□□□ -1.32
LCN1-202ENST00000371781 A0A1W2PPM0 123 aa6.82□□□□□ -1.32
LCN1-202ENST00000371781 M0QXV9 152 aa6.82□□□□□ -1.32
LCN1-202ENST00000371781 RPL28P46779 137 aaKnown RBP6.82□□□□□ -1.32
LCN1-202ENST00000371781 Q6ZSA8 131 aa6.82□□□□□ -1.32
LCN1-202ENST00000371781 PHF5AQ7RTV0 110 aaKnown RBP6.82□□□□□ -1.32
LCN1-202ENST00000371781 LINC00167Q96N53 147 aa6.82□□□□□ -1.32
LCN1-202ENST00000371781 HSPG2P98160 4391 aa6.81□□□□□ -1.32
LCN1-202ENST00000371781 A0A087WYN8 130 aa6.81□□□□□ -1.32
LCN1-202ENST00000371781 HAMPP81172 84 aa6.81□□□□□ -1.32
LCN1-202ENST00000371781 OR13C6PQ8NH95 151 aa6.81□□□□□ -1.32
LCN1-202ENST00000371781 VPS13BQ7Z7G8 4022 aa6.8□□□□□ -1.32
LCN1-202ENST00000371781 Q1RN00 199 aa6.8□□□□□ -1.32
LCN1-202ENST00000371781 MRPL55Q7Z7F7 128 aaKnown RBP6.8□□□□□ -1.32
LCN1-202ENST00000371781 NKAPP1Q8N9T2 125 aa6.8□□□□□ -1.32
LCN1-202ENST00000371781 FAM218AQ96MZ4 157 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms