RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 MT-ND6P03923 174 aa4.62□□□□□ -1.67
SFR1-201ENST00000369727 MT1HL1P0DM35 61 aa4.62□□□□□ -1.67
SFR1-201ENST00000369727 UBE2V1Q13404 147 aa4.62□□□□□ -1.67
SFR1-201ENST00000369727 RHEBQ15382 184 aa4.62□□□□□ -1.67
SFR1-201ENST00000369727 SPINK6Q6UWN8 80 aa4.62□□□□□ -1.67
SFR1-201ENST00000369727 UNQ6190/PRO20217Q6UXQ8 127 aa4.62□□□□□ -1.67
SFR1-201ENST00000369727 TOMM6Q96B49 74 aa4.62□□□□□ -1.67
SFR1-201ENST00000369727 C6orf48Q9UBA6 75 aa4.62□□□□□ -1.67
SFR1-201ENST00000369727 CARHSP1Q9Y2V2 147 aaKnown RBP4.62□□□□□ -1.67
SFR1-201ENST00000369727 LINC01546A6NGU7 62 aa4.61□□□□□ -1.67
SFR1-201ENST00000369727 HERVK_113P63121 156 aa4.61□□□□□ -1.67
SFR1-201ENST00000369727 ZC2HC1BQ5TFG8 222 aa4.61□□□□□ -1.67
SFR1-201ENST00000369727 HMCN2Q8NDA2 5059 aa4.6□□□□□ -1.67
SFR1-201ENST00000369727 CKS1BP61024 79 aa4.6□□□□□ -1.67
SFR1-201ENST00000369727 SRSF9Q13242 221 aaKnown RBP eCLIP4.6□□□□□ -1.67
SFR1-201ENST00000369727 SCGB3A1Q96QR1 104 aa4.6□□□□□ -1.67
SFR1-201ENST00000369727 RPS10P5Q9NQ39 176 aa4.6□□□□□ -1.67
SFR1-201ENST00000369727 NDUFC2-KCTD14E9PQ53 114 aa4.59□□□□□ -1.67
SFR1-201ENST00000369727 REG3GQ6UW15 175 aa4.59□□□□□ -1.67
SFR1-201ENST00000369727 C2orf82Q6UX34 121 aa4.59□□□□□ -1.67
SFR1-201ENST00000369727 Q8IZM0 81 aa4.59□□□□□ -1.67
SFR1-201ENST00000369727 LINC01600Q96MT4 127 aa4.59□□□□□ -1.67
SFR1-201ENST00000369727 A0A0U1RRA0 63 aa4.58□□□□□ -1.68
SFR1-201ENST00000369727 COLCA2A8K830 154 aa4.58□□□□□ -1.68
SFR1-201ENST00000369727 APOC3P02656 99 aa4.58□□□□□ -1.68
SFR1-201ENST00000369727 S100A2P29034 98 aa4.58□□□□□ -1.68
SFR1-201ENST00000369727 GAGE2EQ4V326 116 aa4.58□□□□□ -1.68
SFR1-201ENST00000369727 C6orf226Q5I0X4 101 aa4.58□□□□□ -1.68
SFR1-201ENST00000369727 FA2HQ7L5A8 372 aa4.58□□□□□ -1.68
SFR1-201ENST00000369727 PHF5AQ7RTV0 110 aaKnown RBP4.58□□□□□ -1.68
SFR1-201ENST00000369727 CST9LQ9H4G1 147 aa4.58□□□□□ -1.68
SFR1-201ENST00000369727 TOMM7Q9P0U1 55 aa4.58□□□□□ -1.68
SFR1-201ENST00000369727 GAGE2DQ9UEU5 116 aa4.58□□□□□ -1.68
SFR1-201ENST00000369727 CDKN2A-AS1Q9UH64 79 aa4.58□□□□□ -1.68
SFR1-201ENST00000369727 PSORS1C2Q9UIG4 136 aa4.58□□□□□ -1.68
SFR1-201ENST00000369727 TINCRA0A1B0GVN0 87 aa4.57□□□□□ -1.68
SFR1-201ENST00000369727 CXCL5P42830 114 aa4.57□□□□□ -1.68
SFR1-201ENST00000369727 SVBPQ8N300 66 aa4.57□□□□□ -1.68
SFR1-201ENST00000369727 PRO1933Q9H354 126 aa4.57□□□□□ -1.68
SFR1-201ENST00000369727 SMCO4Q9NRQ5 59 aa4.57□□□□□ -1.68
SFR1-201ENST00000369727 IGLV5-37A0A075B6J1 123 aa4.56□□□□□ -1.68
SFR1-201ENST00000369727 IGLV5-45A0A087WSX0 123 aa4.56□□□□□ -1.68
SFR1-201ENST00000369727 FAM168BA1KXE4 195 aa4.56□□□□□ -1.68
SFR1-201ENST00000369727 F8VRH5 84 aa4.56□□□□□ -1.68
SFR1-201ENST00000369727 PMVKQ15126 192 aa4.56□□□□□ -1.68
SFR1-201ENST00000369727 PDZD11Q5EBL8 140 aa4.56□□□□□ -1.68
SFR1-201ENST00000369727 C1orf137Q5JT78 98 aa4.56□□□□□ -1.68
SFR1-201ENST00000369727 COL5A1-AS1Q5SY13 56 aa4.56□□□□□ -1.68
SFR1-201ENST00000369727 FAM19A5Q7Z5A7 132 aaPredicted RBP4.56□□□□□ -1.68
SFR1-201ENST00000369727 SMIM20Q8N5G0 67 aa4.56□□□□□ -1.68
SFR1-201ENST00000369727 SS18L2Q9UHA2 77 aa4.56□□□□□ -1.68
SFR1-201ENST00000369727 TRAPPC1Q9Y5R8 145 aa4.56□□□□□ -1.68
SFR1-201ENST00000369727 SMIM1B2RUZ4 78 aa4.55□□□□□ -1.68
SFR1-201ENST00000369727 KRTAP10-8P60410 259 aa4.55□□□□□ -1.68
SFR1-201ENST00000369727 JOSD1Q15040 202 aaPredicted RBP4.55□□□□□ -1.68
SFR1-201ENST00000369727 C9orf129Q5T035 196 aaKnown RBP4.55□□□□□ -1.68
SFR1-201ENST00000369727 KRTAP7-1Q8IUC3 87 aa4.55□□□□□ -1.68
SFR1-201ENST00000369727 TNXBP22105 4242 aa4.55□□□□□ -1.68
SFR1-201ENST00000369727 IGLV7-43P04211 117 aa4.55□□□□□ -1.68
SFR1-201ENST00000369727 KRTAP10-5P60370 271 aa4.55□□□□□ -1.68
SFR1-201ENST00000369727 C18orf32Q8TCD1 76 aa4.55□□□□□ -1.68
SFR1-201ENST00000369727 COX7B2Q8TF08 81 aa4.55□□□□□ -1.68
SFR1-201ENST00000369727 A0A096LNJ9 63 aa4.54□□□□□ -1.68
SFR1-201ENST00000369727 H3BRM9 83 aa4.54□□□□□ -1.68
SFR1-201ENST00000369727 HBDP02042 147 aa4.54□□□□□ -1.68
SFR1-201ENST00000369727 UBE2BP63146 152 aa4.54□□□□□ -1.68
SFR1-201ENST00000369727 KRTAP11-1Q8IUC1 163 aa4.54□□□□□ -1.68
SFR1-201ENST00000369727 DIRC1Q969H9 104 aa4.54□□□□□ -1.68
SFR1-201ENST00000369727 IGLC3P0DOY3 106 aa4.53□□□□□ -1.68
SFR1-201ENST00000369727 TP73-AS1Q9UF72 201 aa4.53□□□□□ -1.68
SFR1-201ENST00000369727 H0Y9J4 135 aa4.52□□□□□ -1.69
SFR1-201ENST00000369727 ATP5LO75964 103 aa4.52□□□□□ -1.69
SFR1-201ENST00000369727 SPINK8P0C7L1 97 aa4.52□□□□□ -1.69
SFR1-201ENST00000369727 CBLN2Q8IUK8 224 aa4.52□□□□□ -1.69
SFR1-201ENST00000369727 YPEL4Q96NS1 127 aa4.52□□□□□ -1.69
SFR1-201ENST00000369727 SIGMAR1Q99720 223 aa4.52□□□□□ -1.69
SFR1-201ENST00000369727 XAGE1AQ9HD64 81 aa4.52□□□□□ -1.69
SFR1-201ENST00000369727 C22orf24Q9Y442 160 aa4.52□□□□□ -1.69
SFR1-201ENST00000369727 NUPR1O60356 82 aa4.51□□□□□ -1.69
SFR1-201ENST00000369727 ZNF22P17026 224 aaPredicted RBP4.51□□□□□ -1.69
SFR1-201ENST00000369727 NDUFA6P56556 154 aa4.51□□□□□ -1.69
SFR1-201ENST00000369727 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
SFR1-201ENST00000369727 PMCHL1Q16048 86 aa4.5□□□□□ -1.69
SFR1-201ENST00000369727 MRPL55Q7Z7F7 128 aaKnown RBP4.5□□□□□ -1.69
SFR1-201ENST00000369727 SMIM29Q86T20 159 aa4.5□□□□□ -1.69
SFR1-201ENST00000369727 CHCHD1Q96BP2 118 aaKnown RBP4.5□□□□□ -1.69
SFR1-201ENST00000369727 PPDPFQ9H3Y8 114 aa4.5□□□□□ -1.69
SFR1-201ENST00000369727 IGLV1-50A0A075B6I6 118 aa4.49□□□□□ -1.69
SFR1-201ENST00000369727 SFTA2Q6UW10 78 aa4.49□□□□□ -1.69
SFR1-201ENST00000369727 BAGE3Q86Y29 109 aa4.49□□□□□ -1.69
SFR1-201ENST00000369727 HIST3H2BBQ8N257 126 aa4.49□□□□□ -1.69
SFR1-201ENST00000369727 ERG28Q9UKR5 140 aa4.49□□□□□ -1.69
SFR1-201ENST00000369727 C11orf86A6NJI1 115 aa4.48□□□□□ -1.69
SFR1-201ENST00000369727 ZNF861PO60384 105 aa4.48□□□□□ -1.69
SFR1-201ENST00000369727 COX17Q14061 63 aa4.48□□□□□ -1.69
SFR1-201ENST00000369727 PAM16Q9Y3D7 125 aa4.48□□□□□ -1.69
SFR1-201ENST00000369727 V9GYY9 64 aa4.48□□□□□ -1.69
SFR1-201ENST00000369727 TRAV12-1A0A0B4J245 112 aa4.47□□□□□ -1.69
SFR1-201ENST00000369727 KRTAP1-4P0C5Y4 121 aa4.47□□□□□ -1.69
SFR1-201ENST00000369727 TMEM170BQ5T4T1 132 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms