RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 UBE2D4Q9Y2X8 147 aa0.06□□□□□ -2.4
RNU6-1339P-201ENST00000363574 CACNA1AO00555 2505 aa0.06□□□□□ -2.4
RNU6-1339P-201ENST00000363574 MYO3AQ8NEV4 1616 aa0.05□□□□□ -2.4
RNU6-1339P-201ENST00000363574 KIAA1551Q9HCM1 1747 aa0.05□□□□□ -2.4
RNU6-1339P-201ENST00000363574 HMGN2P05204 90 aaKnown RBP0.05□□□□□ -2.4
RNU6-1339P-201ENST00000363574 SMIM11AP58511 58 aa0.05□□□□□ -2.4
RNU6-1339P-201ENST00000363574 PYY3Q5JQD4 70 aa0.05□□□□□ -2.4
RNU6-1339P-201ENST00000363574 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
RNU6-1339P-201ENST00000363574 APLNQ9ULZ1 77 aa0.05□□□□□ -2.4
RNU6-1339P-201ENST00000363574 COL7A1Q02388 2944 aa0.05□□□□□ -2.4
RNU6-1339P-201ENST00000363574 I3L3M4 83 aa0.04□□□□□ -2.4
RNU6-1339P-201ENST00000363574 PEA15Q15121 130 aa0.04□□□□□ -2.4
RNU6-1339P-201ENST00000363574 UBR1Q8IWV7 1749 aa0.04□□□□□ -2.4
RNU6-1339P-201ENST00000363574 HMCN2Q8NDA2 5059 aa0.03□□□□□ -2.4
RNU6-1339P-201ENST00000363574 DSTQ03001 7570 aaKnown RBP0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 RGPD4Q7Z3J3 1758 aa0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 PTPN13Q12923 2485 aa0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 K7EP34 96 aa0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 SPRR2DP22532 72 aa0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 NMSQ5H8A3 153 aa0.01□□□□□ -2.41
RNU6-1339P-201ENST00000363574 NEXMIFQ5QGS0 1516 aa0.01□□□□□ -2.41
RNU6-1339P-201ENST00000363574 PVALEFA0A1B0GWK0 134 aa0□□□□□ -2.41
RNU6-1339P-201ENST00000363574 ABCC3O15438 1527 aa0□□□□□ -2.41
RNU6-1339P-201ENST00000363574 DEFB112Q30KQ8 113 aa0□□□□□ -2.41
RNU6-1339P-201ENST00000363574 PKD1L1Q8TDX9 2849 aa0□□□□□ -2.41
RNU6-1339P-201ENST00000363574 TNXBP22105 4242 aa-0.01□□□□□ -2.41
RNU6-1339P-201ENST00000363574 RGPD3A6NKT7 1758 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-1339P-201ENST00000363574 SMARCA2P51531 1590 aa-0.01□□□□□ -2.41
RNU6-1339P-201ENST00000363574 S100A16Q96FQ6 103 aaKnown RBP-0.01□□□□□ -2.41
RNU6-1339P-201ENST00000363574 CSPG4Q6UVK1 2322 aa-0.01□□□□□ -2.41
RNU6-1339P-201ENST00000363574 ALKQ9UM73 1620 aa-0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 PLIN4Q96Q06 1357 aa-0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 MYCBP2O75592 4640 aa-0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 SPTY2D1-AS1A0A0U1RR47 76 aa-0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 H1FX-AS1Q4G0G2 97 aa-0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 MRPL34Q9BQ48 92 aaKnown RBP-0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 KIF20BQ96Q89 1820 aa-0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 PKD1L3Q7Z443 1732 aa-0.02□□□□□ -2.41
RNU6-1339P-201ENST00000363574 IQCF6A8MYZ5 107 aa-0.03□□□□□ -2.41
RNU6-1339P-201ENST00000363574 C9orf62Q8N4C0 152 aa-0.03□□□□□ -2.41
RNU6-1339P-201ENST00000363574 LOC730098B7Z3J9 87 aa-0.04□□□□□ -2.42
RNU6-1339P-201ENST00000363574 CYB5AP00167 134 aa-0.04□□□□□ -2.42
RNU6-1339P-201ENST00000363574 GNG2P59768 71 aa-0.04□□□□□ -2.42
RNU6-1339P-201ENST00000363574 PLGLAQ15195 96 aa-0.04□□□□□ -2.42
RNU6-1339P-201ENST00000363574 A0A1B0GUT8 65 aa-0.05□□□□□ -2.42
RNU6-1339P-201ENST00000363574 COL14A1Q05707 1796 aaKnown RBP-0.05□□□□□ -2.42
RNU6-1339P-201ENST00000363574 ATP7BP35670 1465 aa-0.05□□□□□ -2.42
RNU6-1339P-201ENST00000363574 MAGI2Q86UL8 1455 aa-0.06□□□□□ -2.42
RNU6-1339P-201ENST00000363574 FAT2Q9NYQ8 4349 aa-0.07□□□□□ -2.42
RNU6-1339P-201ENST00000363574 ATRQ13535 2644 aa-0.07□□□□□ -2.42
RNU6-1339P-201ENST00000363574 MYMXA0A1B0GTQ4 84 aa-0.07□□□□□ -2.42
RNU6-1339P-201ENST00000363574 SNRPFP62306 86 aaKnown RBP-0.07□□□□□ -2.42
RNU6-1339P-201ENST00000363574 LPAP08519 4548 aa-0.07□□□□□ -2.42
RNU6-1339P-201ENST00000363574 RGPD2P0DJD1 1756 aa-0.08□□□□□ -2.42
RNU6-1339P-201ENST00000363574 CCL22O00626 93 aa-0.08□□□□□ -2.42
RNU6-1339P-201ENST00000363574 QSER1Q2KHR3 1735 aa-0.08□□□□□ -2.42
RNU6-1339P-201ENST00000363574 LRRC7Q96NW7 1537 aa-0.08□□□□□ -2.42
RNU6-1339P-201ENST00000363574 RGPD1P0DJD0 1748 aa-0.09□□□□□ -2.42
RNU6-1339P-201ENST00000363574 FLNCQ14315 2725 aa-0.09□□□□□ -2.42
RNU6-1339P-201ENST00000363574 CLIP1P30622 1438 aa-0.09□□□□□ -2.42
RNU6-1339P-201ENST00000363574 COX7BP24311 80 aa-0.09□□□□□ -2.42
RNU6-1339P-201ENST00000363574 KMT2AQ03164 3969 aa-0.1□□□□□ -2.42
RNU6-1339P-201ENST00000363574 TDRG1Q3Y452 100 aa-0.1□□□□□ -2.43
RNU6-1339P-201ENST00000363574 LELP1Q5T871 98 aa-0.1□□□□□ -2.43
RNU6-1339P-201ENST00000363574 LINC00643Q86TS7 51 aa-0.1□□□□□ -2.43
RNU6-1339P-201ENST00000363574 RABAC1Q9UI14 185 aa-0.1□□□□□ -2.43
RNU6-1339P-201ENST00000363574 TMEM131LA2VDJ0 1609 aa-0.1□□□□□ -2.43
RNU6-1339P-201ENST00000363574 HSPG2P98160 4391 aa-0.1□□□□□ -2.43
RNU6-1339P-201ENST00000363574 SPTA1P02549 2419 aa-0.11□□□□□ -2.43
RNU6-1339P-201ENST00000363574 PPLO60437 1756 aa-0.11□□□□□ -2.43
RNU6-1339P-201ENST00000363574 NEBP20929 6669 aa-0.11□□□□□ -2.43
RNU6-1339P-201ENST00000363574 KIF14Q15058 1648 aa-0.12□□□□□ -2.43
RNU6-1339P-201ENST00000363574 M0R2T5 61 aa-0.12□□□□□ -2.43
RNU6-1339P-201ENST00000363574 GAFA1Q96PS6 74 aa-0.12□□□□□ -2.43
RNU6-1339P-201ENST00000363574 BCORQ6W2J9 1755 aa-0.12□□□□□ -2.43
RNU6-1339P-201ENST00000363574 UBR3Q6ZT12 1888 aa-0.12□□□□□ -2.43
RNU6-1339P-201ENST00000363574 BSNQ9UPA5 3926 aa-0.13□□□□□ -2.43
RNU6-1339P-201ENST00000363574 HEPN1Q6WQI6 88 aa-0.13□□□□□ -2.43
RNU6-1339P-201ENST00000363574 EP300Q09472 2414 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1339P-201ENST00000363574 MAP3K4Q9Y6R4 1608 aa-0.14□□□□□ -2.43
RNU6-1339P-201ENST00000363574 UACAQ9BZF9 1416 aa-0.14□□□□□ -2.43
RNU6-1339P-201ENST00000363574 CEBPZOSA8MTT3 80 aa-0.15□□□□□ -2.43
RNU6-1339P-201ENST00000363574 ACYP1P07311 99 aa-0.15□□□□□ -2.43
RNU6-1339P-201ENST00000363574 CDKN2A-AS1Q9UH64 79 aa-0.15□□□□□ -2.43
RNU6-1339P-201ENST00000363574 RB1CC1Q8TDY2 1594 aa-0.15□□□□□ -2.43
RNU6-1339P-201ENST00000363574 MUC12Q9UKN1 5478 aa-0.16□□□□□ -2.43
RNU6-1339P-201ENST00000363574 TRAV21A0A0B4J279 112 aa-0.16□□□□□ -2.44
RNU6-1339P-201ENST00000363574 LRRC9Q6ZRR7 1453 aa-0.16□□□□□ -2.44
RNU6-1339P-201ENST00000363574 PREX1Q8TCU6 1659 aa-0.17□□□□□ -2.44
RNU6-1339P-201ENST00000363574 CHD8Q9HCK8 2581 aa-0.17□□□□□ -2.44
RNU6-1339P-201ENST00000363574 SPRR2BP35325 72 aa-0.17□□□□□ -2.44
RNU6-1339P-201ENST00000363574 SUPT6HQ7KZ85 1726 aaKnown RBP-0.17□□□□□ -2.44
RNU6-1339P-201ENST00000363574 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.18□□□□□ -2.44
RNU6-1339P-201ENST00000363574 MED14O60244 1454 aa-0.18□□□□□ -2.44
RNU6-1339P-201ENST00000363574 ALMS1Q8TCU4 4167 aa-0.18□□□□□ -2.44
RNU6-1339P-201ENST00000363574 USP32Q8NFA0 1604 aa-0.19□□□□□ -2.44
RNU6-1339P-201ENST00000363574 RPL38P63173 70 aaKnown RBP-0.19□□□□□ -2.44
RNU6-1339P-201ENST00000363574 WFDC13Q8IUB5 93 aa-0.19□□□□□ -2.44
RNU6-1339P-201ENST00000363574 WNK1Q9H4A3 2382 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms