RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 C3orf22Q8N5N4 141 aa4.2□□□□□ -1.74
SUDS3-201ENST00000360286 C15orf56Q8N910 161 aa4.2□□□□□ -1.74
SUDS3-201ENST00000360286 NTN5Q8WTR8 489 aaPredicted RBP4.2□□□□□ -1.74
SUDS3-201ENST00000360286 TIMM17AQ99595 171 aa4.2□□□□□ -1.74
SUDS3-201ENST00000360286 IGLV5-52A0A0A0MRZ9 124 aa4.19□□□□□ -1.74
SUDS3-201ENST00000360286 C16orf90A8MZG2 172 aa4.19□□□□□ -1.74
SUDS3-201ENST00000360286 SLPIP03973 132 aa4.19□□□□□ -1.74
SUDS3-201ENST00000360286 PSMB2P49721 201 aa4.19□□□□□ -1.74
SUDS3-201ENST00000360286 LINC01620Q4KN68 170 aa4.19□□□□□ -1.74
SUDS3-201ENST00000360286 HIGD2BQ4VC39 106 aa4.19□□□□□ -1.74
SUDS3-201ENST00000360286 LINC00242Q5T6M2 205 aa4.19□□□□□ -1.74
SUDS3-201ENST00000360286 APOBP04114 4563 aaKnown RBP4.19□□□□□ -1.74
SUDS3-201ENST00000360286 TRAV12-1A0A0B4J245 112 aa4.18□□□□□ -1.74
SUDS3-201ENST00000360286 IGHV3OR16-9A0A0B4J2B5 98 aa4.18□□□□□ -1.74
SUDS3-201ENST00000360286 A0A0J9YXV3 536 aa4.18□□□□□ -1.74
SUDS3-201ENST00000360286 LINC01549A6NIU2 74 aa4.18□□□□□ -1.74
SUDS3-201ENST00000360286 COX7A2LO14548 114 aa4.18□□□□□ -1.74
SUDS3-201ENST00000360286 CRYGAP11844 174 aa4.18□□□□□ -1.74
SUDS3-201ENST00000360286 KRTAP10-1P60331 282 aa4.18□□□□□ -1.74
SUDS3-201ENST00000360286 C14orf177Q52M58 125 aa4.18□□□□□ -1.74
SUDS3-201ENST00000360286 PAPPA-AS1Q5QFB9 102 aa4.18□□□□□ -1.74
SUDS3-201ENST00000360286 ANKRD29Q8N6D5 301 aa4.18□□□□□ -1.74
SUDS3-201ENST00000360286 IGKV2D-26A0A0A0MRZ7 120 aa4.17□□□□□ -1.74
SUDS3-201ENST00000360286 IGHV1-58A0A0C4DH39 117 aa4.17□□□□□ -1.74
SUDS3-201ENST00000360286 SLC25A20O43772 301 aa4.17□□□□□ -1.74
SUDS3-201ENST00000360286 MALP21145 153 aa4.17□□□□□ -1.74
SUDS3-201ENST00000360286 HERVK_113P63121 156 aa4.17□□□□□ -1.74
SUDS3-201ENST00000360286 TMEM170BQ5T4T1 132 aa4.17□□□□□ -1.74
SUDS3-201ENST00000360286 C9orf153Q5TBE3 101 aa4.17□□□□□ -1.74
SUDS3-201ENST00000360286 FAM19A3Q7Z5A8 133 aa4.17□□□□□ -1.74
SUDS3-201ENST00000360286 IGHV3-64A0A075B6Q5 118 aa4.16□□□□□ -1.74
SUDS3-201ENST00000360286 A0A087WZ39 114 aa4.16□□□□□ -1.74
SUDS3-201ENST00000360286 GVQW2A0A096LPI5 108 aaPredicted RBP4.16□□□□□ -1.74
SUDS3-201ENST00000360286 TCL1BO95988 128 aa4.16□□□□□ -1.74
SUDS3-201ENST00000360286 CXCL5P42830 114 aa4.16□□□□□ -1.74
SUDS3-201ENST00000360286 TMEM258P61165 79 aa4.16□□□□□ -1.74
SUDS3-201ENST00000360286 CDKN2A-AS1Q9UH64 79 aa4.16□□□□□ -1.74
SUDS3-201ENST00000360286 RYR1P21817 5038 aa4.16□□□□□ -1.74
SUDS3-201ENST00000360286 HSPG2P98160 4391 aa4.15□□□□□ -1.74
SUDS3-201ENST00000360286 KIAA1109Q2LD37 5005 aa4.15□□□□□ -1.74
SUDS3-201ENST00000360286 IGLV4-69A0A075B6H9 119 aa4.15□□□□□ -1.75
SUDS3-201ENST00000360286 LOC107984156A0A0G2JMH3 177 aa4.15□□□□□ -1.75
SUDS3-201ENST00000360286 TRBV10-2A0A0K0K1G8 114 aa4.15□□□□□ -1.75
SUDS3-201ENST00000360286 TINCRA0A1B0GVN0 87 aa4.15□□□□□ -1.75
SUDS3-201ENST00000360286 H3BT86 120 aa4.15□□□□□ -1.75
SUDS3-201ENST00000360286 ZNF561-AS1K7EIQ3 104 aa4.15□□□□□ -1.75
SUDS3-201ENST00000360286 COX7CP15954 63 aa4.15□□□□□ -1.75
SUDS3-201ENST00000360286 ATXN8Q156A1 80 aa4.15□□□□□ -1.75
SUDS3-201ENST00000360286 ARL17AQ8IVW1 177 aa4.15□□□□□ -1.75
SUDS3-201ENST00000360286 C9orf163Q8N9P6 203 aa4.15□□□□□ -1.75
SUDS3-201ENST00000360286 FAM30AQ9NZY2 134 aa4.15□□□□□ -1.75
SUDS3-201ENST00000360286 PRO0628Q9UI54 55 aa4.15□□□□□ -1.75
SUDS3-201ENST00000360286 CNBPP62633 177 aaKnown RBP4.14□□□□□ -1.75
SUDS3-201ENST00000360286 SPAG11BQ08648 103 aa4.14□□□□□ -1.75
SUDS3-201ENST00000360286 KIAA0087Q14695 138 aa4.14□□□□□ -1.75
SUDS3-201ENST00000360286 GAGE2AQ6NT46 116 aa4.14□□□□□ -1.75
SUDS3-201ENST00000360286 Q6ZRU5 148 aa4.14□□□□□ -1.75
SUDS3-201ENST00000360286 LINC01561Q8N1V8 128 aa4.14□□□□□ -1.75
SUDS3-201ENST00000360286 PRO1854Q9UHT4 67 aa4.14□□□□□ -1.75
SUDS3-201ENST00000360286 IGLV5-45A0A087WSX0 123 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 A0A0B4J2C4 111 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 C11orf86A6NJI1 115 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 NDUFC2-KCTD14E9PQ53 114 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 F8VRH5 84 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 TRACP01848 142 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 ZNF22P17026 224 aaPredicted RBP4.13□□□□□ -1.75
SUDS3-201ENST00000360286 HAMPP81172 84 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 SYCNQ0VAF6 134 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 C10orf25Q5T742 122 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 UNQ6190/PRO20217Q6UXQ8 127 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 SDIM1Q6ZPB5 146 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 LINC00643Q86TS7 51 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 CAMK2N2Q96S95 79 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 MRPL35Q9NZE8 188 aaKnown RBP4.13□□□□□ -1.75
SUDS3-201ENST00000360286 TOMM7Q9P0U1 55 aa4.13□□□□□ -1.75
SUDS3-201ENST00000360286 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.12□□□□□ -1.75
SUDS3-201ENST00000360286 LOC107984640A0A0U1RRK4 108 aa4.12□□□□□ -1.75
SUDS3-201ENST00000360286 SMIM1B2RUZ4 78 aa4.12□□□□□ -1.75
SUDS3-201ENST00000360286 PANO1I0J062 215 aa4.12□□□□□ -1.75
SUDS3-201ENST00000360286 ATOX1O00244 68 aa4.12□□□□□ -1.75
SUDS3-201ENST00000360286 SRSF9Q13242 221 aaKnown RBP eCLIP4.12□□□□□ -1.75
SUDS3-201ENST00000360286 C2orf82Q6UX34 121 aa4.12□□□□□ -1.75
SUDS3-201ENST00000360286 DPH3Q96FX2 82 aa4.12□□□□□ -1.75
SUDS3-201ENST00000360286 C2orf48Q96LS8 159 aa4.12□□□□□ -1.75
SUDS3-201ENST00000360286 KRTAP17-1Q9BYP8 105 aa4.12□□□□□ -1.75
SUDS3-201ENST00000360286 VPS13BQ7Z7G8 4022 aa4.11□□□□□ -1.75
SUDS3-201ENST00000360286 TRBV30A0A0K0K1B3 111 aa4.11□□□□□ -1.75
SUDS3-201ENST00000360286 PRSS2P07478 247 aa4.11□□□□□ -1.75
SUDS3-201ENST00000360286 CHTF8P0CG12 524 aa4.11□□□□□ -1.75
SUDS3-201ENST00000360286 C6orf226Q5I0X4 101 aa4.11□□□□□ -1.75
SUDS3-201ENST00000360286 Q6ZSA8 131 aa4.11□□□□□ -1.75
SUDS3-201ENST00000360286 TTTY13Q9BZ97 58 aa4.11□□□□□ -1.75
SUDS3-201ENST00000360286 C6orf48Q9UBA6 75 aa4.11□□□□□ -1.75
SUDS3-201ENST00000360286 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.11□□□□□ -1.75
SUDS3-201ENST00000360286 HERC2O95714 4834 aa4.11□□□□□ -1.75
SUDS3-201ENST00000360286 FAT1Q14517 4588 aa4.1□□□□□ -1.75
SUDS3-201ENST00000360286 TMEM223A0PJW6 202 aa4.1□□□□□ -1.75
SUDS3-201ENST00000360286 NDUFA1O15239 70 aa4.1□□□□□ -1.75
SUDS3-201ENST00000360286 CDK2AP2O75956 126 aa4.1□□□□□ -1.75
SUDS3-201ENST00000360286 CFC1BP0CG36 223 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms