RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 SMIM29Q86T20 159 aa2.9□□□□□ -1.94
PTPN22-201ENST00000359785 NBPF19A0A087WUL8 3843 aa2.9□□□□□ -1.95
PTPN22-201ENST00000359785 PRB3Q04118 309 aaPredicted RBP2.9□□□□□ -1.95
PTPN22-201ENST00000359785 CHCHD10Q8WYQ3 142 aaPredicted RBP2.9□□□□□ -1.95
PTPN22-201ENST00000359785 ZFHX4Q86UP3 3567 aa2.9□□□□□ -1.95
PTPN22-201ENST00000359785 PLCE1Q9P212 2302 aa2.9□□□□□ -1.95
PTPN22-201ENST00000359785 COL6A3P12111 3177 aa2.9□□□□□ -1.95
PTPN22-201ENST00000359785 CDH23Q9H251 3354 aa2.9□□□□□ -1.95
PTPN22-201ENST00000359785 WFDC9Q8NEX5 89 aa2.89□□□□□ -1.95
PTPN22-201ENST00000359785 LCE3BQ5TA77 95 aa2.89□□□□□ -1.95
PTPN22-201ENST00000359785 Q8NAQ8 132 aa2.89□□□□□ -1.95
PTPN22-201ENST00000359785 TP53AIP1Q9HCN2 124 aa2.89□□□□□ -1.95
PTPN22-201ENST00000359785 VPS13CQ709C8 3753 aa2.89□□□□□ -1.95
PTPN22-201ENST00000359785 URB1O60287 2271 aaKnown RBP2.89□□□□□ -1.95
PTPN22-201ENST00000359785 SVILO95425 2214 aa2.89□□□□□ -1.95
PTPN22-201ENST00000359785 TRGV1A0A0A0MS02 117 aa2.89□□□□□ -1.95
PTPN22-201ENST00000359785 IGLV1-50A0A075B6I6 118 aa2.88□□□□□ -1.95
PTPN22-201ENST00000359785 PLA2G1BP04054 148 aaKnown RBP2.88□□□□□ -1.95
PTPN22-201ENST00000359785 PRB4P10163 310 aaPredicted RBP2.88□□□□□ -1.95
PTPN22-201ENST00000359785 SLURP1P55000 103 aa2.88□□□□□ -1.95
PTPN22-201ENST00000359785 REG3AQ06141 175 aa2.88□□□□□ -1.95
PTPN22-201ENST00000359785 C15orf56Q8N910 161 aa2.88□□□□□ -1.95
PTPN22-201ENST00000359785 C1orf43Q9BWL3 253 aa2.88□□□□□ -1.95
PTPN22-201ENST00000359785 C3orf84H3BNL1 204 aa2.88□□□□□ -1.95
PTPN22-201ENST00000359785 KRTAP10-9P60411 292 aa2.88□□□□□ -1.95
PTPN22-201ENST00000359785 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
PTPN22-201ENST00000359785 C7orf65Q6ZTY9 151 aa2.88□□□□□ -1.95
PTPN22-201ENST00000359785 AKAP13Q12802 2813 aa2.88□□□□□ -1.95
PTPN22-201ENST00000359785 PRB1P04280 392 aa2.88□□□□□ -1.95
PTPN22-201ENST00000359785 CADP27708 2225 aa2.87□□□□□ -1.95
PTPN22-201ENST00000359785 CELSR2Q9HCU4 2923 aa2.87□□□□□ -1.95
PTPN22-201ENST00000359785 HIGD2BQ4VC39 106 aa2.87□□□□□ -1.95
PTPN22-201ENST00000359785 C10orf25Q5T742 122 aa2.87□□□□□ -1.95
PTPN22-201ENST00000359785 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
PTPN22-201ENST00000359785 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
PTPN22-201ENST00000359785 LINC00472Q9H8W2 130 aa2.87□□□□□ -1.95
PTPN22-201ENST00000359785 SNURFQ9Y675 71 aa2.87□□□□□ -1.95
PTPN22-201ENST00000359785 KALRNO60229 2985 aa2.87□□□□□ -1.95
PTPN22-201ENST00000359785 C16orf90A8MZG2 172 aa2.87□□□□□ -1.95
PTPN22-201ENST00000359785 SPAG11BQ08648 103 aa2.87□□□□□ -1.95
PTPN22-201ENST00000359785 B9D2Q9BPU9 175 aa2.87□□□□□ -1.95
PTPN22-201ENST00000359785 CYSRT1A8MQ03 144 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 LINC00483Q53H64 154 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 LINC01556Q5JQF7 62 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 NOTCH2NLQ7Z3S9 236 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 LAMA3Q16787 3333 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 IGHV3-73A0A0B4J1V6 119 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 MOBPQ13875 183 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 LINC01006Q8NI28 216 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 HIGD2AQ9BW72 106 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 TRIOO75962 3097 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 TRRAPQ9Y4A5 3859 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 BRD3OSQ6XYD6 125 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 WFDC11Q8NEX6 87 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 KRTAP9-8Q9BYQ0 159 aa2.86□□□□□ -1.95
PTPN22-201ENST00000359785 NOP10Q9NPE3 64 aaKnown RBP2.86□□□□□ -1.95
PTPN22-201ENST00000359785 LAMA2P24043 3122 aaKnown RBP2.86□□□□□ -1.95
PTPN22-201ENST00000359785 DCHS2Q6V1P9 2916 aa2.85□□□□□ -1.95
PTPN22-201ENST00000359785 DNAH10OSP0CZ25 163 aa2.85□□□□□ -1.95
PTPN22-201ENST00000359785 LCE2AQ5TA79 106 aaPredicted RBP2.85□□□□□ -1.95
PTPN22-201ENST00000359785 CLPSL2Q6UWE3 100 aa2.85□□□□□ -1.95
PTPN22-201ENST00000359785 KRTAP13-1Q8IUC0 172 aa2.85□□□□□ -1.95
PTPN22-201ENST00000359785 BRK1Q8WUW1 75 aa2.85□□□□□ -1.95
PTPN22-201ENST00000359785 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
PTPN22-201ENST00000359785 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
PTPN22-201ENST00000359785 FAM30AQ9NZY2 134 aa2.85□□□□□ -1.95
PTPN22-201ENST00000359785 HECTD4Q9Y4D8 3996 aa2.85□□□□□ -1.95
PTPN22-201ENST00000359785 DOPEY1Q5JWR5 2465 aa2.85□□□□□ -1.95
PTPN22-201ENST00000359785 PKIGQ9Y2B9 76 aa2.85□□□□□ -1.95
PTPN22-201ENST00000359785 CEP250Q9BV73 2442 aa2.85□□□□□ -1.95
PTPN22-201ENST00000359785 CELSR1Q9NYQ6 3014 aa2.85□□□□□ -1.95
PTPN22-201ENST00000359785 A8MWP4 228 aa2.84□□□□□ -1.95
PTPN22-201ENST00000359785 C10orf99Q6UWK7 81 aa2.84□□□□□ -1.95
PTPN22-201ENST00000359785 LCA10Q71F78 164 aa2.84□□□□□ -1.95
PTPN22-201ENST00000359785 FREM2Q5SZK8 3169 aa2.84□□□□□ -1.95
PTPN22-201ENST00000359785 SPEGQ15772 3267 aa2.84□□□□□ -1.95
PTPN22-201ENST00000359785 LCE1DQ5T752 114 aa2.84□□□□□ -1.95
PTPN22-201ENST00000359785 LINC00208Q96KT6 92 aa2.84□□□□□ -1.95
PTPN22-201ENST00000359785 APC2O95996 2303 aa2.84□□□□□ -1.96
PTPN22-201ENST00000359785 IGKV3OR2-268A0A0C4DH90 116 aa2.84□□□□□ -1.96
PTPN22-201ENST00000359785 KRTAP7-1Q8IUC3 87 aa2.84□□□□□ -1.96
PTPN22-201ENST00000359785 RTL8CO15255 209 aa2.83□□□□□ -1.96
PTPN22-201ENST00000359785 Q96NJ1 140 aa2.83□□□□□ -1.96
PTPN22-201ENST00000359785 RBM12B-AS1Q9P1G2 102 aa2.83□□□□□ -1.96
PTPN22-201ENST00000359785 LINC00269Q8N2A0 174 aa2.83□□□□□ -1.96
PTPN22-201ENST00000359785 NBEAQ8NFP9 2946 aa2.83□□□□□ -1.96
PTPN22-201ENST00000359785 ANKRD11Q6UB99 2663 aaPredicted RBP2.83□□□□□ -1.96
PTPN22-201ENST00000359785 A0A096LPF7 62 aa2.83□□□□□ -1.96
PTPN22-201ENST00000359785 MMP24-AS1A0A0U1RRL7 71 aa2.83□□□□□ -1.96
PTPN22-201ENST00000359785 GYPEP15421 78 aa2.83□□□□□ -1.96
PTPN22-201ENST00000359785 APOC4P55056 127 aa2.83□□□□□ -1.96
PTPN22-201ENST00000359785 ANKHD1Q8IWZ3 2542 aaKnown RBP2.83□□□□□ -1.96
PTPN22-201ENST00000359785 HIVEP3Q5T1R4 2406 aa2.83□□□□□ -1.96
PTPN22-201ENST00000359785 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.83□□□□□ -1.96
PTPN22-201ENST00000359785 TTC28Q96AY4 2481 aa2.83□□□□□ -1.96
PTPN22-201ENST00000359785 HAMPP81172 84 aa2.82□□□□□ -1.96
PTPN22-201ENST00000359785 UNQ6190/PRO20217Q6UXQ8 127 aa2.82□□□□□ -1.96
PTPN22-201ENST00000359785 LY6EQ16553 131 aa2.82□□□□□ -1.96
PTPN22-201ENST00000359785 PTPRZ1P23471 2315 aaPredicted RBP2.82□□□□□ -1.96
PTPN22-201ENST00000359785 C1orf137Q5JT78 98 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms