RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 COX6CP09669 75 aa3.54□□□□□ -1.84
ATXN3-202ENST00000359366 ZNF22P17026 224 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-202ENST00000359366 DAZ4Q86SG3 579 aaKnown RBP3.54□□□□□ -1.84
ATXN3-202ENST00000359366 VSIG2Q96IQ7 327 aa3.54□□□□□ -1.84
ATXN3-202ENST00000359366 DAZ3Q9NR90 486 aaKnown RBP3.54□□□□□ -1.84
ATXN3-202ENST00000359366 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-202ENST00000359366 UBE2L6O14933 153 aa3.54□□□□□ -1.84
ATXN3-202ENST00000359366 EGFEM1PQ0D2K5 195 aa3.54□□□□□ -1.84
ATXN3-202ENST00000359366 LINC00612Q8N6U2 182 aa3.54□□□□□ -1.84
ATXN3-202ENST00000359366 AMELXQ99217 191 aa3.54□□□□□ -1.84
ATXN3-202ENST00000359366 TMEM243Q9BU79 118 aa3.54□□□□□ -1.84
ATXN3-202ENST00000359366 CFC1BP0CG36 223 aa3.53□□□□□ -1.84
ATXN3-202ENST00000359366 CFC1P0CG37 223 aa3.53□□□□□ -1.84
ATXN3-202ENST00000359366 CDKN2A-AS1Q9UH64 79 aa3.53□□□□□ -1.84
ATXN3-202ENST00000359366 FBN3Q75N90 2809 aa3.53□□□□□ -1.84
ATXN3-202ENST00000359366 TRBV6-8A0A0A6YYG3 113 aa3.53□□□□□ -1.85
ATXN3-202ENST00000359366 A0A0J9YWU9 116 aa3.53□□□□□ -1.85
ATXN3-202ENST00000359366 TMEM223A0PJW6 202 aa3.53□□□□□ -1.85
ATXN3-202ENST00000359366 LYRM9A8MSI8 78 aa3.53□□□□□ -1.85
ATXN3-202ENST00000359366 NDUFC1O43677 76 aa3.53□□□□□ -1.85
ATXN3-202ENST00000359366 MIFP14174 115 aa3.53□□□□□ -1.85
ATXN3-202ENST00000359366 SCGB1D4Q6XE38 83 aa3.53□□□□□ -1.85
ATXN3-202ENST00000359366 DAND5Q8N907 189 aa3.53□□□□□ -1.85
ATXN3-202ENST00000359366 PRO0255Q9UI72 69 aa3.53□□□□□ -1.85
ATXN3-202ENST00000359366 PRKDCP78527 4128 aaKnown RBP3.52□□□□□ -1.85
ATXN3-202ENST00000359366 SPART-AS1P0CW21 52 aa3.52□□□□□ -1.85
ATXN3-202ENST00000359366 NANOS2P60321 138 aaKnown RBP3.52□□□□□ -1.85
ATXN3-202ENST00000359366 Q6ZTC4 211 aa3.52□□□□□ -1.85
ATXN3-202ENST00000359366 CDC42SE2Q9NRR3 84 aa3.52□□□□□ -1.85
ATXN3-202ENST00000359366 CSMD3Q7Z407 3707 aa3.52□□□□□ -1.85
ATXN3-202ENST00000359366 MEGF8Q7Z7M0 2845 aa3.52□□□□□ -1.85
ATXN3-202ENST00000359366 IGHV3-30-3P0DP02 117 aa3.52□□□□□ -1.85
ATXN3-202ENST00000359366 PAPPA-AS1Q5QFB9 102 aa3.52□□□□□ -1.85
ATXN3-202ENST00000359366 LINC00242Q5T6M2 205 aa3.52□□□□□ -1.85
ATXN3-202ENST00000359366 ZNF625Q96I27 306 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-202ENST00000359366 IGHV1-58A0A0C4DH39 117 aa3.51□□□□□ -1.85
ATXN3-202ENST00000359366 K7EIL1 84 aa3.51□□□□□ -1.85
ATXN3-202ENST00000359366 IGHV3-33P01772 117 aa3.51□□□□□ -1.85
ATXN3-202ENST00000359366 INAFM2P0DMQ5 153 aa3.51□□□□□ -1.85
ATXN3-202ENST00000359366 LGALS3P17931 250 aaKnown RBP3.51□□□□□ -1.85
ATXN3-202ENST00000359366 FP248Q71RG6 208 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-202ENST00000359366 TIMM21Q9BVV7 248 aa3.51□□□□□ -1.85
ATXN3-202ENST00000359366 TGP01266 2768 aa3.51□□□□□ -1.85
ATXN3-202ENST00000359366 IGLV10-54A0A075B6I4 117 aa3.51□□□□□ -1.85
ATXN3-202ENST00000359366 USP17L23D6RBM5 183 aa3.5□□□□□ -1.85
ATXN3-202ENST00000359366 H7C423 109 aa3.5□□□□□ -1.85
ATXN3-202ENST00000359366 SFTA2Q6UW10 78 aa3.5□□□□□ -1.85
ATXN3-202ENST00000359366 C11orf68Q9H3H3 251 aaKnown RBP3.5□□□□□ -1.85
ATXN3-202ENST00000359366 DNAH7Q8WXX0 4024 aa3.5□□□□□ -1.85
ATXN3-202ENST00000359366 LEPROTO15243 131 aa3.5□□□□□ -1.85
ATXN3-202ENST00000359366 IGHV3-30P01768 117 aa3.5□□□□□ -1.85
ATXN3-202ENST00000359366 IGHV3-30-5P0DP03 117 aa3.5□□□□□ -1.85
ATXN3-202ENST00000359366 XCL1P47992 114 aa3.5□□□□□ -1.85
ATXN3-202ENST00000359366 Q6JHZ5 121 aa3.5□□□□□ -1.85
ATXN3-202ENST00000359366 CYSTM1Q9H1C7 97 aa3.5□□□□□ -1.85
ATXN3-202ENST00000359366 DNAH9Q9NYC9 4486 aa3.49□□□□□ -1.85
ATXN3-202ENST00000359366 TIMM17BO60830 172 aa3.49□□□□□ -1.85
ATXN3-202ENST00000359366 ADAMTSL4-AS1Q5T5F5 129 aa3.49□□□□□ -1.85
ATXN3-202ENST00000359366 LINC00269Q8N2A0 174 aa3.49□□□□□ -1.85
ATXN3-202ENST00000359366 TOMM7Q9P0U1 55 aa3.49□□□□□ -1.85
ATXN3-202ENST00000359366 KLKP1Q107X0 134 aa3.49□□□□□ -1.85
ATXN3-202ENST00000359366 NDUFA12Q9UI09 145 aa3.49□□□□□ -1.85
ATXN3-202ENST00000359366 A0A0J9YXY3 114 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 SMIM1B2RUZ4 78 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 H3BS24 57 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 LST1O00453 97 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 ANGP03950 147 aaKnown RBP3.48□□□□□ -1.85
ATXN3-202ENST00000359366 CCKP06307 115 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 KPRPQ5T749 579 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-202ENST00000359366 ATP5EP2Q5VTU8 51 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 PRSS2P07478 247 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 Q1RN00 199 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 S100A7L2Q5SY68 101 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 KTN1-AS1Q86SY8 53 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 C11orf45Q8TAV5 145 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 TM2D3Q9BRN9 247 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 Q9H8V8 135 aa3.48□□□□□ -1.85
ATXN3-202ENST00000359366 IGLV5-45A0A087WSX0 123 aa3.47□□□□□ -1.85
ATXN3-202ENST00000359366 DEFB131BA0A096LNP1 70 aa3.47□□□□□ -1.85
ATXN3-202ENST00000359366 LINC00959A0A1B0GUT2 108 aa3.47□□□□□ -1.85
ATXN3-202ENST00000359366 H7BZZ5 65 aa3.47□□□□□ -1.85
ATXN3-202ENST00000359366 H7C2G1 150 aa3.47□□□□□ -1.85
ATXN3-202ENST00000359366 NDUFS5O43920 106 aa3.47□□□□□ -1.85
ATXN3-202ENST00000359366 WFDC10BQ8IUB3 73 aa3.47□□□□□ -1.85
ATXN3-202ENST00000359366 SMCR5Q8TEV8 140 aa3.47□□□□□ -1.85
ATXN3-202ENST00000359366 ICOSQ9Y6W8 199 aa3.47□□□□□ -1.85
ATXN3-202ENST00000359366 LYPD5Q6UWN5 251 aa3.47□□□□□ -1.85
ATXN3-202ENST00000359366 MUSTN1Q8IVN3 82 aa3.47□□□□□ -1.85
ATXN3-202ENST00000359366 LITAFQ99732 161 aa3.47□□□□□ -1.85
ATXN3-202ENST00000359366 KLK12Q9UKR0 248 aa3.47□□□□□ -1.85
ATXN3-202ENST00000359366 IGHV3OR16-9A0A0B4J2B5 98 aa3.46□□□□□ -1.86
ATXN3-202ENST00000359366 IGLV5-39A0A0G2JS06 123 aa3.46□□□□□ -1.86
ATXN3-202ENST00000359366 TRBV10-3A0A0K0K1G6 114 aa3.46□□□□□ -1.86
ATXN3-202ENST00000359366 IBA57-AS1B1ANH7 110 aa3.46□□□□□ -1.86
ATXN3-202ENST00000359366 RBM3P98179 157 aaKnown RBP3.46□□□□□ -1.86
ATXN3-202ENST00000359366 REG3AQ06141 175 aa3.46□□□□□ -1.86
ATXN3-202ENST00000359366 ESRGQ1W209 222 aa3.46□□□□□ -1.86
ATXN3-202ENST00000359366 RBM12B-AS1Q9P1G2 102 aa3.46□□□□□ -1.86
ATXN3-202ENST00000359366 TRAV13-2A0A0B4J235 113 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms