RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 ZNF292O60281 2723 aa8□□□□□ -1.13
CNOT3-202ENST00000358389 FP248Q71RG6 208 aaPredicted RBP8□□□□□ -1.13
CNOT3-202ENST00000358389 UBE2BP63146 152 aa7.99□□□□□ -1.13
CNOT3-202ENST00000358389 C9orf116Q5BN46 136 aaPredicted RBP7.99□□□□□ -1.13
CNOT3-202ENST00000358389 IGHV3OR16-9A0A0B4J2B5 98 aa7.99□□□□□ -1.13
CNOT3-202ENST00000358389 TRBV10-3A0A0K0K1G6 114 aa7.99□□□□□ -1.13
CNOT3-202ENST00000358389 M0R2N4 97 aa7.99□□□□□ -1.13
CNOT3-202ENST00000358389 SEC61GP60059 68 aa7.99□□□□□ -1.13
CNOT3-202ENST00000358389 Q6ZQY7 126 aa7.98□□□□□ -1.13
CNOT3-202ENST00000358389 BBC3Q96PG8 261 aaPredicted RBP7.98□□□□□ -1.13
CNOT3-202ENST00000358389 A0A087WZ39 114 aa7.98□□□□□ -1.13
CNOT3-202ENST00000358389 LRCOL1A6NCL2 159 aa7.98□□□□□ -1.13
CNOT3-202ENST00000358389 C1orf158Q8N1D5 194 aa7.97□□□□□ -1.13
CNOT3-202ENST00000358389 REG3AQ06141 175 aa7.97□□□□□ -1.13
CNOT3-202ENST00000358389 ITPR3Q14573 2671 aa7.97□□□□□ -1.13
CNOT3-202ENST00000358389 TRBV6-8A0A0A6YYG3 113 aa7.97□□□□□ -1.13
CNOT3-202ENST00000358389 LINC00959A0A1B0GUT2 108 aa7.97□□□□□ -1.13
CNOT3-202ENST00000358389 ETDCA0A1B0GVM5 59 aa7.96□□□□□ -1.13
CNOT3-202ENST00000358389 KLKP1Q107X0 134 aa7.96□□□□□ -1.13
CNOT3-202ENST00000358389 NREPQ16612 68 aa7.96□□□□□ -1.13
CNOT3-202ENST00000358389 FAM19A3Q7Z5A8 133 aa7.96□□□□□ -1.13
CNOT3-202ENST00000358389 CHCHD10Q8WYQ3 142 aaPredicted RBP7.96□□□□□ -1.14
CNOT3-202ENST00000358389 Q8N9L7 120 aa7.96□□□□□ -1.14
CNOT3-202ENST00000358389 ODF3L2Q3SX64 289 aa7.95□□□□□ -1.14
CNOT3-202ENST00000358389 Q6ZQT0 140 aa7.95□□□□□ -1.14
CNOT3-202ENST00000358389 LINC01006Q8NI28 216 aa7.95□□□□□ -1.14
CNOT3-202ENST00000358389 NDUFC1O43677 76 aa7.95□□□□□ -1.14
CNOT3-202ENST00000358389 TMEM254Q8TBM7 123 aa7.94□□□□□ -1.14
CNOT3-202ENST00000358389 FUSP35637 526 aaKnown RBP eCLIP7.94□□□□□ -1.14
CNOT3-202ENST00000358389 CRYBG3Q68DQ2 2970 aa7.94□□□□□ -1.14
CNOT3-202ENST00000358389 F8WDY8 70 aa7.93□□□□□ -1.14
CNOT3-202ENST00000358389 BPY2O14599 106 aa7.93□□□□□ -1.14
CNOT3-202ENST00000358389 DIRC1Q969H9 104 aa7.93□□□□□ -1.14
CNOT3-202ENST00000358389 TEP1Q99973 2627 aaKnown RBP7.93□□□□□ -1.14
CNOT3-202ENST00000358389 SMR3AQ99954 134 aa7.93□□□□□ -1.14
CNOT3-202ENST00000358389 AKAP9Q99996 3911 aa7.93□□□□□ -1.14
CNOT3-202ENST00000358389 A0A096LNT2 108 aa7.93□□□□□ -1.14
CNOT3-202ENST00000358389 CDK2AP2O75956 126 aa7.93□□□□□ -1.14
CNOT3-202ENST00000358389 LINC00575Q6W349 94 aa7.92□□□□□ -1.14
CNOT3-202ENST00000358389 ITPR1Q14643 2758 aa7.91□□□□□ -1.14
CNOT3-202ENST00000358389 IGKV2-24A0A0C4DH68 120 aa7.91□□□□□ -1.14
CNOT3-202ENST00000358389 NANOS2P60321 138 aaKnown RBP7.91□□□□□ -1.14
CNOT3-202ENST00000358389 A0A096LNI7 61 aa7.9□□□□□ -1.14
CNOT3-202ENST00000358389 C16orf95Q9H693 158 aa7.9□□□□□ -1.14
CNOT3-202ENST00000358389 ATP5EP56381 51 aaPredicted RBP7.9□□□□□ -1.14
CNOT3-202ENST00000358389 Q8IZM0 81 aa7.89□□□□□ -1.15
CNOT3-202ENST00000358389 FAM229BQ4G0N7 80 aa7.89□□□□□ -1.15
CNOT3-202ENST00000358389 MUC7Q8TAX7 377 aa7.89□□□□□ -1.15
CNOT3-202ENST00000358389 BCE1O60756 84 aa7.89□□□□□ -1.15
CNOT3-202ENST00000358389 HELZ2Q9BYK8 2649 aaKnown RBP7.88□□□□□ -1.15
CNOT3-202ENST00000358389 PDE6GP18545 87 aa7.88□□□□□ -1.15
CNOT3-202ENST00000358389 SPATA3Q8NHX4 192 aa7.88□□□□□ -1.15
CNOT3-202ENST00000358389 PRYO14603 147 aa7.88□□□□□ -1.15
CNOT3-202ENST00000358389 CXCL6P80162 114 aa7.88□□□□□ -1.15
CNOT3-202ENST00000358389 ESRGQ1W209 222 aa7.88□□□□□ -1.15
CNOT3-202ENST00000358389 LINC00167Q96N53 147 aa7.88□□□□□ -1.15
CNOT3-202ENST00000358389 CELA1Q9UNI1 258 aa7.88□□□□□ -1.15
CNOT3-202ENST00000358389 PRR4Q16378 134 aa7.87□□□□□ -1.15
CNOT3-202ENST00000358389 COX7BP24311 80 aa7.87□□□□□ -1.15
CNOT3-202ENST00000358389 NBEAL2Q6ZNJ1 2754 aa7.86□□□□□ -1.15
CNOT3-202ENST00000358389 C3orf84H3BNL1 204 aa7.86□□□□□ -1.15
CNOT3-202ENST00000358389 HIGD2AQ9BW72 106 aa7.86□□□□□ -1.15
CNOT3-202ENST00000358389 ZANQ9Y493 2812 aa7.86□□□□□ -1.15
CNOT3-202ENST00000358389 C6orf223Q8N319 242 aa7.86□□□□□ -1.15
CNOT3-202ENST00000358389 LOC110117498A0A087WWA1 95 aa7.85□□□□□ -1.15
CNOT3-202ENST00000358389 NDUFS5O43920 106 aa7.85□□□□□ -1.15
CNOT3-202ENST00000358389 UNQ6190/PRO20217Q6UXQ8 127 aa7.85□□□□□ -1.15
CNOT3-202ENST00000358389 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.85□□□□□ -1.15
CNOT3-202ENST00000358389 EPM2AB3EWF7 344 aa7.85□□□□□ -1.15
CNOT3-202ENST00000358389 CR1P17927 2039 aa7.84□□□□□ -1.15
CNOT3-202ENST00000358389 PSPHP1O15172 72 aa7.84□□□□□ -1.15
CNOT3-202ENST00000358389 NBPF19A0A087WUL8 3843 aa7.84□□□□□ -1.15
CNOT3-202ENST00000358389 FAM30AQ9NZY2 134 aa7.84□□□□□ -1.15
CNOT3-202ENST00000358389 TRBV7-4A0A0J9YYF1 115 aa7.84□□□□□ -1.16
CNOT3-202ENST00000358389 C11orf45Q8TAV5 145 aa7.84□□□□□ -1.16
CNOT3-202ENST00000358389 TEX15Q9BXT5 2789 aa7.83□□□□□ -1.16
CNOT3-202ENST00000358389 IL17DQ8TAD2 202 aa7.83□□□□□ -1.16
CNOT3-202ENST00000358389 CSMD2Q7Z408 3487 aa7.83□□□□□ -1.16
CNOT3-202ENST00000358389 LYRM9A8MSI8 78 aa7.83□□□□□ -1.16
CNOT3-202ENST00000358389 NOTCH1P46531 2555 aa7.82□□□□□ -1.16
CNOT3-202ENST00000358389 DEFB131BA0A096LNP1 70 aa7.82□□□□□ -1.16
CNOT3-202ENST00000358389 OXLD1Q5BKU9 147 aa7.82□□□□□ -1.16
CNOT3-202ENST00000358389 CD164L2Q6UWJ8 174 aa7.82□□□□□ -1.16
CNOT3-202ENST00000358389 Q8NDZ9 215 aa7.81□□□□□ -1.16
CNOT3-202ENST00000358389 GCN1Q92616 2671 aaKnown RBP7.81□□□□□ -1.16
CNOT3-202ENST00000358389 C10orf25Q5T742 122 aa7.81□□□□□ -1.16
CNOT3-202ENST00000358389 NBEAL1Q6ZS30 2694 aa7.81□□□□□ -1.16
CNOT3-202ENST00000358389 COX17Q14061 63 aa7.81□□□□□ -1.16
CNOT3-202ENST00000358389 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.8□□□□□ -1.16
CNOT3-202ENST00000358389 PMAIP1Q13794 54 aa7.8□□□□□ -1.16
CNOT3-202ENST00000358389 CYSRT1A8MQ03 144 aa7.8□□□□□ -1.16
CNOT3-202ENST00000358389 KPRPQ5T749 579 aaPredicted RBP7.79□□□□□ -1.16
CNOT3-202ENST00000358389 FBN2P35556 2912 aa7.78□□□□□ -1.16
CNOT3-202ENST00000358389 ZNF73O43830 326 aaPredicted RBP7.78□□□□□ -1.16
CNOT3-202ENST00000358389 SETXQ7Z333 2677 aaKnown RBP7.78□□□□□ -1.16
CNOT3-202ENST00000358389 UBE2AP49459 152 aa7.78□□□□□ -1.16
CNOT3-202ENST00000358389 UBR5O95071 2799 aaPredicted RBP7.77□□□□□ -1.17
CNOT3-202ENST00000358389 RPL37AP8A6NKH3 93 aa7.77□□□□□ -1.17
CNOT3-202ENST00000358389 SYCNQ0VAF6 134 aa7.77□□□□□ -1.17
CNOT3-202ENST00000358389 KIAA0087Q14695 138 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms