RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 DOCK11Q5JSL3 2073 aa0.86□□□□□ -2.27
BRCA1-202ENST00000354071 SYNE2Q8WXH0 6885 aaKnown RBP0.86□□□□□ -2.27
BRCA1-202ENST00000354071 DMBT1Q9UGM3 2413 aaPredicted RBP0.86□□□□□ -2.27
BRCA1-202ENST00000354071 TNRC6AQ8NDV7 1962 aaKnown RBP0.86□□□□□ -2.27
BRCA1-202ENST00000354071 TRGV2A0A075B6R0 118 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 TRBV6-7A0A0A0MS04 114 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV13-2A0A0B4J235 113 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 GNRH2O43555 120 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 TIMM17BO60830 172 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 CTSGP08311 255 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 YPEL3P61236 119 aaPredicted RBP0.85□□□□□ -2.27
BRCA1-202ENST00000354071 LINC00643Q86TS7 51 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 C20orf197Q8N268 126 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 RPP25LQ8N5L8 163 aaKnown RBP0.85□□□□□ -2.27
BRCA1-202ENST00000354071 LINC00304Q8N9R0 145 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 Q8NDZ9 215 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 ATP6V0E2Q8NHE4 81 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 C10orf105Q8TEF2 133 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 C14orf132Q9NPU4 83 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 ZGRF1Q86YA3 2104 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 NYNRINQ9P2P1 1898 aaKnown RBP0.85□□□□□ -2.27
BRCA1-202ENST00000354071 TRGV5A0A0B4J1U4 118 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV3A0A0B4J244 114 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 M0R378 163 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 MT-ATP8P03928 68 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 CRYGSP22914 178 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 CCL8P80075 99 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 MORN2Q502X0 79 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 FAM27BQ5VT28 67 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 LINC01545Q5VT33 79 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 C20orf78Q9BR46 151 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 SLC50A1Q9BRV3 221 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 ORMDL1Q9P0S3 153 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 FREM1Q5H8C1 2179 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 TCRBV4S1A1TA0A5B7 111 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 H3BPC8 53 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 M0R1W7 72 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 YPEL1O60688 119 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 LINC00694P0DN24 101 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 FUSP35637 526 aaKnown RBP eCLIP0.85□□□□□ -2.27
BRCA1-202ENST00000354071 ATP5EP56381 51 aaPredicted RBP0.85□□□□□ -2.27
BRCA1-202ENST00000354071 NREPQ16612 68 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 MIAQ16674 131 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 SOSTDC1Q6X4U4 206 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 LCA10Q71F78 164 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 TMEM141Q96I45 108 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 YPEL2Q96QA6 119 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 AMELYQ99218 206 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 PRR15LQ9BU68 103 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 NDUFA12Q9UI09 145 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 CHCHD2Q9Y6H1 151 aaPredicted RBP0.85□□□□□ -2.27
BRCA1-202ENST00000354071 POLEQ07864 2286 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 PKDREJQ9NTG1 2253 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 DNAH5Q8TE73 4624 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 ALPK2Q86TB3 2170 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 IGLV10-54A0A075B6I4 117 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 TRBV25-1A0A075B6N4 114 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 A0A087WX48 190 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 TRGV4A0A0C4DH28 118 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 TRBV10-2A0A0K0K1G8 114 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 B4DSR2 109 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 F8VRH5 84 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 H0YGX0 51 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 J3QQQ9 107 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 NDUFC1O43677 76 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 KTN1-AS1Q86SY8 53 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 Q8N8P6 123 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 DEFB104AQ8WTQ1 72 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 PATE1Q8WXA2 126 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 LEAP2Q969E1 77 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 TMEM133Q9H2Q1 129 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 MRPL35Q9NZE8 188 aaKnown RBP0.85□□□□□ -2.27
BRCA1-202ENST00000354071 PARP14Q460N5 1801 aa0.85□□□□□ -2.27
BRCA1-202ENST00000354071 WNK2Q9Y3S1 2297 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 ECM29Q5VYK3 1845 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 PLCE1Q9P212 2302 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 TRAV23DV6A0A075B6W5 121 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 A0A0G2JQZ4 141 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 JMJD7-PLA2G4BH0Y9G9 81 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 CCDC179H3BU77 68 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 TMEM256-PLSCR3K7ERE1 68 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 OVOL1O14753 267 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 TFF1P04155 84 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 ARMS2P0C7Q2 107 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 IGLC6P0CF74 106 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 UBE2BP63146 152 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 PDE6HQ13956 83 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 SS18Q15532 418 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 TDRG1Q3Y452 100 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 RPL39P5Q59GN2 51 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 PRR9Q5T870 116 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 ZNF826PQ6ZT77 177 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 CCL4L1Q8NHW4 92 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 PCNX2A6NKB5 2137 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 ARFGEF3Q5TH69 2177 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 CADP27708 2225 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 SPAARA0A1B0GVQ0 90 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 NDUFB1O75438 58 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 HTN3P15516 51 aa0.84□□□□□ -2.27
BRCA1-202ENST00000354071 COX7CP15954 63 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms