RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PRR4Q16378 134 aa7.33□□□□□ -1.24
CAPN3-203ENST00000349748 SONP18583 2426 aaKnown RBP7.33□□□□□ -1.24
CAPN3-203ENST00000349748 DEFB113Q30KQ7 82 aa7.32□□□□□ -1.24
CAPN3-203ENST00000349748 LINC00588Q9Y4M8 146 aa7.32□□□□□ -1.24
CAPN3-203ENST00000349748 BRD3OSQ6XYD6 125 aa7.32□□□□□ -1.24
CAPN3-203ENST00000349748 MUC7Q8TAX7 377 aa7.32□□□□□ -1.24
CAPN3-203ENST00000349748 SPTSSBQ8NFR3 76 aa7.31□□□□□ -1.24
CAPN3-203ENST00000349748 TEX15Q9BXT5 2789 aa7.31□□□□□ -1.24
CAPN3-203ENST00000349748 UBE2L6O14933 153 aa7.31□□□□□ -1.24
CAPN3-203ENST00000349748 LINC00575Q6W349 94 aa7.31□□□□□ -1.24
CAPN3-203ENST00000349748 CELA1Q9UNI1 258 aa7.31□□□□□ -1.24
CAPN3-203ENST00000349748 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.3□□□□□ -1.24
CAPN3-203ENST00000349748 M0R378 163 aa7.3□□□□□ -1.24
CAPN3-203ENST00000349748 UBE2E2Q96LR5 201 aa7.3□□□□□ -1.24
CAPN3-203ENST00000349748 ITPR3Q14573 2671 aa7.29□□□□□ -1.24
CAPN3-203ENST00000349748 APOC4P55056 127 aa7.29□□□□□ -1.24
CAPN3-203ENST00000349748 LY6EQ16553 131 aa7.29□□□□□ -1.24
CAPN3-203ENST00000349748 Q6ZQY7 126 aa7.29□□□□□ -1.24
CAPN3-203ENST00000349748 IGKV4-1P06312 121 aa7.29□□□□□ -1.24
CAPN3-203ENST00000349748 USMG5Q96IX5 58 aa7.29□□□□□ -1.24
CAPN3-203ENST00000349748 FAM30AQ9NZY2 134 aa7.29□□□□□ -1.24
CAPN3-203ENST00000349748 IGHV3OR16-9A0A0B4J2B5 98 aa7.29□□□□□ -1.24
CAPN3-203ENST00000349748 C11orf44Q8N8P7 122 aa7.29□□□□□ -1.24
CAPN3-203ENST00000349748 Q8NDZ9 215 aa7.28□□□□□ -1.24
CAPN3-203ENST00000349748 C9orf66Q5T8R8 295 aa7.28□□□□□ -1.24
CAPN3-203ENST00000349748 FLNAP21333 2647 aaKnown RBP7.27□□□□□ -1.25
CAPN3-203ENST00000349748 IGLV4-60A0A075B6I1 120 aa7.27□□□□□ -1.25
CAPN3-203ENST00000349748 C10orf25Q5T742 122 aa7.27□□□□□ -1.25
CAPN3-203ENST00000349748 LINC00612Q8N6U2 182 aa7.27□□□□□ -1.25
CAPN3-203ENST00000349748 PDZD2O15018 2839 aa7.27□□□□□ -1.25
CAPN3-203ENST00000349748 MSMBP08118 114 aa7.27□□□□□ -1.25
CAPN3-203ENST00000349748 Q5VV11 94 aa7.27□□□□□ -1.25
CAPN3-203ENST00000349748 C16orf90A8MZG2 172 aa7.26□□□□□ -1.25
CAPN3-203ENST00000349748 UBE2BP63146 152 aa7.26□□□□□ -1.25
CAPN3-203ENST00000349748 IGHV4-38-2P0DP08 117 aa7.26□□□□□ -1.25
CAPN3-203ENST00000349748 DSCR9P59020 149 aa7.26□□□□□ -1.25
CAPN3-203ENST00000349748 ESM1Q9NQ30 184 aa7.26□□□□□ -1.25
CAPN3-203ENST00000349748 WNK1Q9H4A3 2382 aa7.26□□□□□ -1.25
CAPN3-203ENST00000349748 MAST4O15021 2626 aa7.26□□□□□ -1.25
CAPN3-203ENST00000349748 CYSRT1A8MQ03 144 aa7.26□□□□□ -1.25
CAPN3-203ENST00000349748 B4DSR2 109 aa7.26□□□□□ -1.25
CAPN3-203ENST00000349748 K7EMT4 169 aa7.26□□□□□ -1.25
CAPN3-203ENST00000349748 PSCAO43653 123 aa7.26□□□□□ -1.25
CAPN3-203ENST00000349748 LINC00269Q8N2A0 174 aa7.26□□□□□ -1.25
CAPN3-203ENST00000349748 ZNF469Q96JG9 3925 aaPredicted RBP7.25□□□□□ -1.25
CAPN3-203ENST00000349748 MTORP42345 2549 aa7.25□□□□□ -1.25
CAPN3-203ENST00000349748 TRGV1A0A0A0MS02 117 aa7.25□□□□□ -1.25
CAPN3-203ENST00000349748 DEFB131AP59861 70 aa7.25□□□□□ -1.25
CAPN3-203ENST00000349748 CHKB-CPT1BH3BT56 60 aa7.25□□□□□ -1.25
CAPN3-203ENST00000349748 CR1P17927 2039 aa7.25□□□□□ -1.25
CAPN3-203ENST00000349748 PDE6GP18545 87 aa7.24□□□□□ -1.25
CAPN3-203ENST00000349748 LOC100131303A0A0U1RQF7 123 aa7.24□□□□□ -1.25
CAPN3-203ENST00000349748 C9orf116Q5BN46 136 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-203ENST00000349748 H3BUX3 64 aa7.23□□□□□ -1.25
CAPN3-203ENST00000349748 SMIM29Q86T20 159 aa7.23□□□□□ -1.25
CAPN3-203ENST00000349748 C10orf99Q6UWK7 81 aa7.23□□□□□ -1.25
CAPN3-203ENST00000349748 KRTAP1-3Q8IUG1 177 aa7.23□□□□□ -1.25
CAPN3-203ENST00000349748 TEP1Q99973 2627 aaKnown RBP7.23□□□□□ -1.25
CAPN3-203ENST00000349748 MXRA5Q9NR99 2828 aa7.23□□□□□ -1.25
CAPN3-203ENST00000349748 TRGV2A0A075B6R0 118 aa7.22□□□□□ -1.25
CAPN3-203ENST00000349748 IGHV4-31P0DP07 118 aa7.22□□□□□ -1.25
CAPN3-203ENST00000349748 OTOGQ6ZRI0 2925 aa7.22□□□□□ -1.25
CAPN3-203ENST00000349748 A6NDX4 124 aa7.21□□□□□ -1.26
CAPN3-203ENST00000349748 HCG22E2RYF7 251 aa7.21□□□□□ -1.26
CAPN3-203ENST00000349748 ZNF73O43830 326 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-203ENST00000349748 IGLV1-40P01703 118 aa7.21□□□□□ -1.26
CAPN3-203ENST00000349748 KLK12Q9UKR0 248 aa7.21□□□□□ -1.26
CAPN3-203ENST00000349748 F8P00451 2351 aa7.21□□□□□ -1.26
CAPN3-203ENST00000349748 H3BS24 57 aa7.2□□□□□ -1.26
CAPN3-203ENST00000349748 SMR3AQ99954 134 aa7.2□□□□□ -1.26
CAPN3-203ENST00000349748 C3orf84H3BNL1 204 aa7.2□□□□□ -1.26
CAPN3-203ENST00000349748 CLPSL2Q6UWE3 100 aa7.2□□□□□ -1.26
CAPN3-203ENST00000349748 TRBV6-8A0A0A6YYG3 113 aa7.19□□□□□ -1.26
CAPN3-203ENST00000349748 H3BUA1 57 aa7.19□□□□□ -1.26
CAPN3-203ENST00000349748 UBE2AP49459 152 aa7.19□□□□□ -1.26
CAPN3-203ENST00000349748 LCA10Q71F78 164 aa7.19□□□□□ -1.26
CAPN3-203ENST00000349748 C8orf87E5RJ46 101 aa7.19□□□□□ -1.26
CAPN3-203ENST00000349748 HIVEP1P15822 2718 aa7.18□□□□□ -1.26
CAPN3-203ENST00000349748 HIVEP2P31629 2446 aa7.18□□□□□ -1.26
CAPN3-203ENST00000349748 LYRM9A8MSI8 78 aa7.18□□□□□ -1.26
CAPN3-203ENST00000349748 AKAP9Q99996 3911 aa7.18□□□□□ -1.26
CAPN3-203ENST00000349748 LINC00959A0A1B0GUT2 108 aa7.17□□□□□ -1.26
CAPN3-203ENST00000349748 A6NN06 94 aa7.17□□□□□ -1.26
CAPN3-203ENST00000349748 SETD2Q9BYW2 2564 aaPredicted RBP7.17□□□□□ -1.26
CAPN3-203ENST00000349748 TRGV4A0A0C4DH28 118 aa7.17□□□□□ -1.26
CAPN3-203ENST00000349748 ZCCHC13Q8WW36 166 aaKnown RBP7.17□□□□□ -1.26
CAPN3-203ENST00000349748 PRR15LQ9BU68 103 aa7.17□□□□□ -1.26
CAPN3-203ENST00000349748 NDUFS5O43920 106 aa7.16□□□□□ -1.26
CAPN3-203ENST00000349748 COX7BP24311 80 aa7.16□□□□□ -1.26
CAPN3-203ENST00000349748 DEFB112Q30KQ8 113 aa7.16□□□□□ -1.26
CAPN3-203ENST00000349748 KHDC1LQ5JSQ8 128 aa7.16□□□□□ -1.26
CAPN3-203ENST00000349748 ST20-AS1Q8NBB2 130 aa7.16□□□□□ -1.26
CAPN3-203ENST00000349748 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-203ENST00000349748 DIRC1Q969H9 104 aa7.15□□□□□ -1.26
CAPN3-203ENST00000349748 IGHV4-59P01825 116 aa7.15□□□□□ -1.27
CAPN3-203ENST00000349748 PHF5AQ7RTV0 110 aaKnown RBP7.15□□□□□ -1.27
CAPN3-203ENST00000349748 Q8IZM0 81 aa7.15□□□□□ -1.27
CAPN3-203ENST00000349748 JMJD1CQ15652 2540 aa7.15□□□□□ -1.27
CAPN3-203ENST00000349748 LCE6AA0A183 80 aa7.14□□□□□ -1.27
CAPN3-203ENST00000349748 INSP01308 110 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms