RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 IGHV4-28A0A0C4DH34 117 aa7.05□□□□□ -1.28
CHRNA1-202ENST00000348749 DNAJC9-AS1A6NH13 148 aa7.05□□□□□ -1.28
CHRNA1-202ENST00000348749 SEC61GP60059 68 aa7.04□□□□□ -1.28
CHRNA1-202ENST00000348749 KIAA0087Q14695 138 aa7.04□□□□□ -1.28
CHRNA1-202ENST00000348749 COL12A1Q99715 3063 aa7.04□□□□□ -1.28
CHRNA1-202ENST00000348749 FAM229BQ4G0N7 80 aa7.04□□□□□ -1.28
CHRNA1-202ENST00000348749 SPATA3Q8NHX4 192 aa7.04□□□□□ -1.28
CHRNA1-202ENST00000348749 CELSR2Q9HCU4 2923 aa7.04□□□□□ -1.28
CHRNA1-202ENST00000348749 NOTCH2Q04721 2471 aa7.03□□□□□ -1.28
CHRNA1-202ENST00000348749 CRYBG3Q68DQ2 2970 aa7.03□□□□□ -1.28
CHRNA1-202ENST00000348749 BPY2O14599 106 aa7.03□□□□□ -1.28
CHRNA1-202ENST00000348749 Q8NDZ9 215 aa7.03□□□□□ -1.28
CHRNA1-202ENST00000348749 A0A0U1RQV1 116 aa7.02□□□□□ -1.29
CHRNA1-202ENST00000348749 PRYO14603 147 aa7.02□□□□□ -1.29
CHRNA1-202ENST00000348749 ESRGQ1W209 222 aa7.02□□□□□ -1.29
CHRNA1-202ENST00000348749 MXRA5Q9NR99 2828 aa7.02□□□□□ -1.29
CHRNA1-202ENST00000348749 KRTAP21-3Q3LHN1 58 aa7.02□□□□□ -1.29
CHRNA1-202ENST00000348749 Q6ZQY7 126 aa7.02□□□□□ -1.29
CHRNA1-202ENST00000348749 LRRK2Q5S007 2527 aa7.02□□□□□ -1.29
CHRNA1-202ENST00000348749 FLNCQ14315 2725 aa7.01□□□□□ -1.29
CHRNA1-202ENST00000348749 IGLV6-57P01721 117 aa7□□□□□ -1.29
CHRNA1-202ENST00000348749 CD164L2Q6UWJ8 174 aa7□□□□□ -1.29
CHRNA1-202ENST00000348749 KRTAP1-3Q8IUG1 177 aa7□□□□□ -1.29
CHRNA1-202ENST00000348749 FUSP35637 526 aaKnown RBP eCLIP7□□□□□ -1.29
CHRNA1-202ENST00000348749 Q6ZTC4 211 aa7□□□□□ -1.29
CHRNA1-202ENST00000348749 SCXQ7RTU7 201 aa7□□□□□ -1.29
CHRNA1-202ENST00000348749 MPLKIPQ8TAP9 179 aa7□□□□□ -1.29
CHRNA1-202ENST00000348749 OCR1Q9BZK8 76 aa7□□□□□ -1.29
CHRNA1-202ENST00000348749 PRO0255Q9UI72 69 aa7□□□□□ -1.29
CHRNA1-202ENST00000348749 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.99□□□□□ -1.29
CHRNA1-202ENST00000348749 MAP1AP78559 2803 aaPredicted RBP6.99□□□□□ -1.29
CHRNA1-202ENST00000348749 GYPEP15421 78 aa6.99□□□□□ -1.29
CHRNA1-202ENST00000348749 LINC01006Q8NI28 216 aa6.99□□□□□ -1.29
CHRNA1-202ENST00000348749 ZANQ9Y493 2812 aa6.98□□□□□ -1.29
CHRNA1-202ENST00000348749 KRTAP10-9P60411 292 aa6.98□□□□□ -1.29
CHRNA1-202ENST00000348749 IGKV4-1P06312 121 aa6.97□□□□□ -1.29
CHRNA1-202ENST00000348749 C9orf116Q5BN46 136 aaPredicted RBP6.97□□□□□ -1.29
CHRNA1-202ENST00000348749 PRR15Q8IV56 129 aa6.97□□□□□ -1.29
CHRNA1-202ENST00000348749 WFDC10AQ9H1F0 79 aa6.97□□□□□ -1.29
CHRNA1-202ENST00000348749 ESM1Q9NQ30 184 aa6.97□□□□□ -1.29
CHRNA1-202ENST00000348749 LYRM9A8MSI8 78 aa6.97□□□□□ -1.29
CHRNA1-202ENST00000348749 COX7BP24311 80 aa6.97□□□□□ -1.29
CHRNA1-202ENST00000348749 CLPSL2Q6UWE3 100 aa6.96□□□□□ -1.3
CHRNA1-202ENST00000348749 DIRC1Q969H9 104 aa6.96□□□□□ -1.3
CHRNA1-202ENST00000348749 C2CD3Q4AC94 2353 aa6.96□□□□□ -1.3
CHRNA1-202ENST00000348749 NBPF19A0A087WUL8 3843 aa6.96□□□□□ -1.3
CHRNA1-202ENST00000348749 ABCA12Q86UK0 2595 aa6.96□□□□□ -1.3
CHRNA1-202ENST00000348749 UTP20O75691 2785 aaKnown RBP6.96□□□□□ -1.3
CHRNA1-202ENST00000348749 NOTCH3Q9UM47 2321 aa6.95□□□□□ -1.3
CHRNA1-202ENST00000348749 DEFB130BP0DP73 79 aa6.95□□□□□ -1.3
CHRNA1-202ENST00000348749 DEFB130AP0DP74 79 aa6.95□□□□□ -1.3
CHRNA1-202ENST00000348749 LINC00269Q8N2A0 174 aa6.95□□□□□ -1.3
CHRNA1-202ENST00000348749 WNK1Q9H4A3 2382 aa6.95□□□□□ -1.3
CHRNA1-202ENST00000348749 FBN2P35556 2912 aa6.95□□□□□ -1.3
CHRNA1-202ENST00000348749 CHCHD10Q8WYQ3 142 aaPredicted RBP6.94□□□□□ -1.3
CHRNA1-202ENST00000348749 A0A0J9YWU9 116 aa6.93□□□□□ -1.3
CHRNA1-202ENST00000348749 IGHV4-30-4P0DP06 118 aa6.93□□□□□ -1.3
CHRNA1-202ENST00000348749 X6R8D5 127 aa6.93□□□□□ -1.3
CHRNA1-202ENST00000348749 hDV103S1A0JD37 113 aa6.93□□□□□ -1.3
CHRNA1-202ENST00000348749 ELOF1P60002 83 aaKnown RBP6.93□□□□□ -1.3
CHRNA1-202ENST00000348749 Q1T7F1 81 aa6.93□□□□□ -1.3
CHRNA1-202ENST00000348749 Q6ZRU5 148 aa6.93□□□□□ -1.3
CHRNA1-202ENST00000348749 REG3AQ06141 175 aa6.92□□□□□ -1.3
CHRNA1-202ENST00000348749 HIGD2AQ9BW72 106 aa6.92□□□□□ -1.3
CHRNA1-202ENST00000348749 CELA1Q9UNI1 258 aa6.92□□□□□ -1.3
CHRNA1-202ENST00000348749 POLQO75417 2590 aa6.92□□□□□ -1.3
CHRNA1-202ENST00000348749 TLN2Q9Y4G6 2542 aa6.92□□□□□ -1.3
CHRNA1-202ENST00000348749 ITPR2Q14571 2701 aa6.92□□□□□ -1.3
CHRNA1-202ENST00000348749 GVQW2A0A096LPI5 108 aaPredicted RBP6.91□□□□□ -1.3
CHRNA1-202ENST00000348749 LCE6AA0A183 80 aa6.91□□□□□ -1.3
CHRNA1-202ENST00000348749 AKAP9Q99996 3911 aa6.91□□□□□ -1.3
CHRNA1-202ENST00000348749 ZNF73O43830 326 aaPredicted RBP6.91□□□□□ -1.3
CHRNA1-202ENST00000348749 C10orf25Q5T742 122 aa6.91□□□□□ -1.3
CHRNA1-202ENST00000348749 UNQ6190/PRO20217Q6UXQ8 127 aa6.91□□□□□ -1.3
CHRNA1-202ENST00000348749 Q8N9L7 120 aa6.91□□□□□ -1.3
CHRNA1-202ENST00000348749 PMAIP1Q13794 54 aa6.9□□□□□ -1.3
CHRNA1-202ENST00000348749 ANGP03950 147 aaKnown RBP6.89□□□□□ -1.31
CHRNA1-202ENST00000348749 SPAG11BQ08648 103 aa6.89□□□□□ -1.31
CHRNA1-202ENST00000348749 IGLV10-54A0A075B6I4 117 aa6.88□□□□□ -1.31
CHRNA1-202ENST00000348749 LELP1Q5T871 98 aa6.88□□□□□ -1.31
CHRNA1-202ENST00000348749 Q6ZRP5 223 aa6.88□□□□□ -1.31
CHRNA1-202ENST00000348749 KRTAP1-1Q07627 177 aa6.87□□□□□ -1.31
CHRNA1-202ENST00000348749 PRR34Q9NV39 138 aa6.87□□□□□ -1.31
CHRNA1-202ENST00000348749 JMJD1CQ15652 2540 aa6.87□□□□□ -1.31
CHRNA1-202ENST00000348749 APOC4P55056 127 aa6.86□□□□□ -1.31
CHRNA1-202ENST00000348749 HIGD2BQ4VC39 106 aa6.86□□□□□ -1.31
CHRNA1-202ENST00000348749 C1orf64Q8NEQ6 169 aa6.86□□□□□ -1.31
CHRNA1-202ENST00000348749 ZCCHC13Q8WW36 166 aaKnown RBP6.86□□□□□ -1.31
CHRNA1-202ENST00000348749 DAD1P61803 113 aa6.85□□□□□ -1.31
CHRNA1-202ENST00000348749 LINC00528Q8N1L1 170 aa6.85□□□□□ -1.31
CHRNA1-202ENST00000348749 ITPR3Q14573 2671 aa6.85□□□□□ -1.31
CHRNA1-202ENST00000348749 A0A096LPF7 62 aa6.84□□□□□ -1.31
CHRNA1-202ENST00000348749 A0A1B0GW54 56 aa6.84□□□□□ -1.31
CHRNA1-202ENST00000348749 SMIM29Q86T20 159 aa6.84□□□□□ -1.31
CHRNA1-202ENST00000348749 CYP4F30PQ9H0H9 118 aa6.84□□□□□ -1.32
CHRNA1-202ENST00000348749 VPREB1P12018 145 aa6.83□□□□□ -1.32
CHRNA1-202ENST00000348749 FAM30AQ9NZY2 134 aa6.83□□□□□ -1.32
CHRNA1-202ENST00000348749 C6orf48Q9UBA6 75 aa6.83□□□□□ -1.32
CHRNA1-202ENST00000348749 OTOGQ6ZRI0 2925 aa6.82□□□□□ -1.32
CHRNA1-202ENST00000348749 KLK12Q9UKR0 248 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms