RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 FBN2P35556 2912 aa6.5□□□□□ -1.37
HOXA1-201ENST00000343060 IGLV10-54A0A075B6I4 117 aa6.5□□□□□ -1.37
HOXA1-201ENST00000343060 ANGP03950 147 aaKnown RBP6.5□□□□□ -1.37
HOXA1-201ENST00000343060 ELOF1P60002 83 aaKnown RBP6.5□□□□□ -1.37
HOXA1-201ENST00000343060 TMEM254Q8TBM7 123 aa6.5□□□□□ -1.37
HOXA1-201ENST00000343060 X6R8D5 127 aa6.5□□□□□ -1.37
HOXA1-201ENST00000343060 BPY2O14599 106 aa6.49□□□□□ -1.37
HOXA1-201ENST00000343060 COX7BP24311 80 aa6.49□□□□□ -1.37
HOXA1-201ENST00000343060 CHD8Q9HCK8 2581 aa6.49□□□□□ -1.37
HOXA1-201ENST00000343060 A0A096LPF7 62 aa6.48□□□□□ -1.37
HOXA1-201ENST00000343060 CYSRT1A8MQ03 144 aa6.48□□□□□ -1.37
HOXA1-201ENST00000343060 SCXQ7RTU7 201 aa6.48□□□□□ -1.37
HOXA1-201ENST00000343060 CELA1Q9UNI1 258 aa6.48□□□□□ -1.37
HOXA1-201ENST00000343060 ZNF73O43830 326 aaPredicted RBP6.48□□□□□ -1.37
HOXA1-201ENST00000343060 ESM1Q9NQ30 184 aa6.48□□□□□ -1.37
HOXA1-201ENST00000343060 LINC00474Q9P2X8 69 aa6.48□□□□□ -1.37
HOXA1-201ENST00000343060 A0A0U1RQV1 116 aa6.47□□□□□ -1.37
HOXA1-201ENST00000343060 LYRM9A8MSI8 78 aa6.47□□□□□ -1.37
HOXA1-201ENST00000343060 IGKV4-1P06312 121 aa6.47□□□□□ -1.37
HOXA1-201ENST00000343060 DEFB113Q30KQ7 82 aa6.47□□□□□ -1.37
HOXA1-201ENST00000343060 OCR1Q9BZK8 76 aa6.47□□□□□ -1.37
HOXA1-201ENST00000343060 CFAP46Q8IYW2 2715 aa6.47□□□□□ -1.37
HOXA1-201ENST00000343060 KRTAP1-3Q8IUG1 177 aa6.46□□□□□ -1.37
HOXA1-201ENST00000343060 PRR34Q9NV39 138 aa6.46□□□□□ -1.37
HOXA1-201ENST00000343060 FLNCQ14315 2725 aa6.46□□□□□ -1.38
HOXA1-201ENST00000343060 C6orf48Q9UBA6 75 aa6.46□□□□□ -1.38
HOXA1-201ENST00000343060 PRYO14603 147 aa6.45□□□□□ -1.38
HOXA1-201ENST00000343060 POLQO75417 2590 aa6.45□□□□□ -1.38
HOXA1-201ENST00000343060 PKD1L2Q7Z442 2459 aa6.44□□□□□ -1.38
HOXA1-201ENST00000343060 VPREB1P12018 145 aa6.44□□□□□ -1.38
HOXA1-201ENST00000343060 KRTAP10-9P60411 292 aa6.44□□□□□ -1.38
HOXA1-201ENST00000343060 WFDC11Q8NEX6 87 aa6.44□□□□□ -1.38
HOXA1-201ENST00000343060 SPTBN4Q9H254 2564 aa6.44□□□□□ -1.38
HOXA1-201ENST00000343060 TEX15Q9BXT5 2789 aa6.44□□□□□ -1.38
HOXA1-201ENST00000343060 EPG5Q9HCE0 2579 aa6.44□□□□□ -1.38
HOXA1-201ENST00000343060 UTP20O75691 2785 aaKnown RBP6.44□□□□□ -1.38
HOXA1-201ENST00000343060 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
HOXA1-201ENST00000343060 FAM229BQ4G0N7 80 aa6.43□□□□□ -1.38
HOXA1-201ENST00000343060 LELP1Q5T871 98 aa6.43□□□□□ -1.38
HOXA1-201ENST00000343060 C1orf43Q9BWL3 253 aa6.43□□□□□ -1.38
HOXA1-201ENST00000343060 Q6ZTC4 211 aa6.42□□□□□ -1.38
HOXA1-201ENST00000343060 XAGE1AQ9HD64 81 aa6.42□□□□□ -1.38
HOXA1-201ENST00000343060 M0R378 163 aa6.41□□□□□ -1.38
HOXA1-201ENST00000343060 ESRGQ1W209 222 aa6.41□□□□□ -1.38
HOXA1-201ENST00000343060 LRRK2Q5S007 2527 aa6.41□□□□□ -1.38
HOXA1-201ENST00000343060 LCE6AA0A183 80 aa6.41□□□□□ -1.38
HOXA1-201ENST00000343060 FUSP35637 526 aaKnown RBP eCLIP6.41□□□□□ -1.38
HOXA1-201ENST00000343060 Q8N9L7 120 aa6.41□□□□□ -1.38
HOXA1-201ENST00000343060 PTPN13Q12923 2485 aa6.4□□□□□ -1.38
HOXA1-201ENST00000343060 FN1P02751 2386 aaKnown RBP6.4□□□□□ -1.38
HOXA1-201ENST00000343060 ACACBO00763 2458 aa6.4□□□□□ -1.39
HOXA1-201ENST00000343060 NAV2Q8IVL1 2488 aa6.4□□□□□ -1.39
HOXA1-201ENST00000343060 NIPBLQ6KC79 2804 aaeCLIP6.39□□□□□ -1.39
HOXA1-201ENST00000343060 EGFEM1PQ0D2K5 195 aa6.39□□□□□ -1.39
HOXA1-201ENST00000343060 BRK1Q8WUW1 75 aa6.39□□□□□ -1.39
HOXA1-201ENST00000343060 KLK12Q9UKR0 248 aa6.39□□□□□ -1.39
HOXA1-201ENST00000343060 A0A1B0GW54 56 aa6.38□□□□□ -1.39
HOXA1-201ENST00000343060 F8WDY8 70 aa6.38□□□□□ -1.39
HOXA1-201ENST00000343060 DAD1P61803 113 aa6.38□□□□□ -1.39
HOXA1-201ENST00000343060 PKIGQ9Y2B9 76 aa6.38□□□□□ -1.39
HOXA1-201ENST00000343060 CUBNO60494 3623 aa6.38□□□□□ -1.39
HOXA1-201ENST00000343060 ZNF469Q96JG9 3925 aaPredicted RBP6.37□□□□□ -1.39
HOXA1-201ENST00000343060 IGLV5-48A0A075B6I7 105 aa6.37□□□□□ -1.39
HOXA1-201ENST00000343060 HIGD2BQ4VC39 106 aa6.37□□□□□ -1.39
HOXA1-201ENST00000343060 HIGD2AQ9BW72 106 aa6.37□□□□□ -1.39
HOXA1-201ENST00000343060 KRTAP26-1Q6PEX3 210 aa6.36□□□□□ -1.39
HOXA1-201ENST00000343060 SONP18583 2426 aaKnown RBP6.36□□□□□ -1.39
HOXA1-201ENST00000343060 Q8NAQ8 132 aa6.36□□□□□ -1.39
HOXA1-201ENST00000343060 IGSF10Q6WRI0 2623 aa6.35□□□□□ -1.39
HOXA1-201ENST00000343060 MYO18BQ8IUG5 2567 aa6.35□□□□□ -1.39
HOXA1-201ENST00000343060 hDV103S1A0JD37 113 aa6.35□□□□□ -1.39
HOXA1-201ENST00000343060 MPLKIPQ8TAP9 179 aa6.35□□□□□ -1.39
HOXA1-201ENST00000343060 CAMK2N2Q96S95 79 aa6.35□□□□□ -1.39
HOXA1-201ENST00000343060 NF1P21359 2839 aa6.35□□□□□ -1.39
HOXA1-201ENST00000343060 ANK3Q12955 4377 aaKnown RBP6.35□□□□□ -1.39
HOXA1-201ENST00000343060 DEFB4AO15263 64 aa6.35□□□□□ -1.39
HOXA1-201ENST00000343060 ZCCHC13Q8WW36 166 aaKnown RBP6.35□□□□□ -1.39
HOXA1-201ENST00000343060 ZFYVE26Q68DK2 2539 aa6.35□□□□□ -1.39
HOXA1-201ENST00000343060 KRTAP1-1Q07627 177 aa6.34□□□□□ -1.39
HOXA1-201ENST00000343060 DEFB135Q30KP9 77 aa6.34□□□□□ -1.39
HOXA1-201ENST00000343060 C1orf195Q5TG92 126 aa6.34□□□□□ -1.39
HOXA1-201ENST00000343060 FAM208BQ5VWN6 2430 aa6.34□□□□□ -1.39
HOXA1-201ENST00000343060 C3orf84H3BNL1 204 aa6.34□□□□□ -1.39
HOXA1-201ENST00000343060 Q6ZRU5 148 aa6.34□□□□□ -1.39
HOXA1-201ENST00000343060 SMIM29Q86T20 159 aa6.34□□□□□ -1.39
HOXA1-201ENST00000343060 Q8N377 158 aa6.34□□□□□ -1.39
HOXA1-201ENST00000343060 ITPR3Q14573 2671 aa6.33□□□□□ -1.4
HOXA1-201ENST00000343060 KCNQ1DNQ9H478 68 aa6.33□□□□□ -1.4
HOXA1-201ENST00000343060 APCP25054 2843 aa6.33□□□□□ -1.4
HOXA1-201ENST00000343060 CACNA1AO00555 2505 aa6.33□□□□□ -1.4
HOXA1-201ENST00000343060 KPRPQ5T749 579 aaPredicted RBP6.33□□□□□ -1.4
HOXA1-201ENST00000343060 C15orf56Q8N910 161 aa6.33□□□□□ -1.4
HOXA1-201ENST00000343060 ABCA12Q86UK0 2595 aa6.33□□□□□ -1.4
HOXA1-201ENST00000343060 APOC4P55056 127 aa6.32□□□□□ -1.4
HOXA1-201ENST00000343060 TNP2Q05952 138 aa6.32□□□□□ -1.4
HOXA1-201ENST00000343060 GCN1Q92616 2671 aaKnown RBP6.32□□□□□ -1.4
HOXA1-201ENST00000343060 KRTAP10-3P60369 221 aa6.32□□□□□ -1.4
HOXA1-201ENST00000343060 Q1T7F1 81 aa6.32□□□□□ -1.4
HOXA1-201ENST00000343060 A0A1W2PNM2 257 aa6.31□□□□□ -1.4
HOXA1-201ENST00000343060 SPART-AS1P0CW21 52 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms