RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 C3orf84H3BNL1 204 aa9.74□□□□□ -0.85
PCDH8-201ENST00000338862 TRBV10-3A0A0K0K1G6 114 aa9.74□□□□□ -0.85
PCDH8-201ENST00000338862 BAHCC1Q9P281 2608 aa9.74□□□□□ -0.85
PCDH8-201ENST00000338862 M0R2N4 97 aa9.74□□□□□ -0.85
PCDH8-201ENST00000338862 C1orf43Q9BWL3 253 aa9.73□□□□□ -0.85
PCDH8-201ENST00000338862 NBEAL1Q6ZS30 2694 aa9.73□□□□□ -0.85
PCDH8-201ENST00000338862 IGKV2D-24A0A075B6R9 120 aa9.72□□□□□ -0.85
PCDH8-201ENST00000338862 DIRC1Q969H9 104 aa9.72□□□□□ -0.85
PCDH8-201ENST00000338862 CRYGAP11844 174 aa9.72□□□□□ -0.85
PCDH8-201ENST00000338862 FSHBP01225 129 aa9.72□□□□□ -0.85
PCDH8-201ENST00000338862 RMI2Q96E14 147 aa9.72□□□□□ -0.85
PCDH8-201ENST00000338862 TMEM258P61165 79 aa9.71□□□□□ -0.85
PCDH8-201ENST00000338862 DPH3Q96FX2 82 aa9.71□□□□□ -0.85
PCDH8-201ENST00000338862 C2orf48Q96LS8 159 aa9.71□□□□□ -0.85
PCDH8-201ENST00000338862 LINC01600Q96MT4 127 aa9.7□□□□□ -0.86
PCDH8-201ENST00000338862 CELA1Q9UNI1 258 aa9.7□□□□□ -0.86
PCDH8-201ENST00000338862 VWFP04275 2813 aa9.7□□□□□ -0.86
PCDH8-201ENST00000338862 IL17DQ8TAD2 202 aa9.7□□□□□ -0.86
PCDH8-201ENST00000338862 FAM236DA0A1B0GTK5 79 aa9.69□□□□□ -0.86
PCDH8-201ENST00000338862 FAM236CP0DP71 79 aa9.69□□□□□ -0.86
PCDH8-201ENST00000338862 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.69□□□□□ -0.86
PCDH8-201ENST00000338862 SPATA3Q8NHX4 192 aa9.69□□□□□ -0.86
PCDH8-201ENST00000338862 TRAV10A0A0B4J240 114 aa9.69□□□□□ -0.86
PCDH8-201ENST00000338862 MAST4O15021 2626 aa9.69□□□□□ -0.86
PCDH8-201ENST00000338862 CSNK1G2-AS1Q8NCQ2 148 aa9.68□□□□□ -0.86
PCDH8-201ENST00000338862 MPLKIPQ8TAP9 179 aa9.68□□□□□ -0.86
PCDH8-201ENST00000338862 COX7BP24311 80 aa9.68□□□□□ -0.86
PCDH8-201ENST00000338862 SPART-AS1P0CW21 52 aa9.68□□□□□ -0.86
PCDH8-201ENST00000338862 LINC00575Q6W349 94 aa9.68□□□□□ -0.86
PCDH8-201ENST00000338862 Q6ZVQ6 151 aa9.68□□□□□ -0.86
PCDH8-201ENST00000338862 F8WEM9 126 aa9.67□□□□□ -0.86
PCDH8-201ENST00000338862 PKIGQ9Y2B9 76 aa9.67□□□□□ -0.86
PCDH8-201ENST00000338862 LINC01547P58512 204 aaPredicted RBP9.67□□□□□ -0.86
PCDH8-201ENST00000338862 Q8NDZ9 215 aa9.67□□□□□ -0.86
PCDH8-201ENST00000338862 NREPQ16612 68 aa9.66□□□□□ -0.86
PCDH8-201ENST00000338862 FAM19A3Q7Z5A8 133 aa9.66□□□□□ -0.86
PCDH8-201ENST00000338862 C19orf73Q9NVV2 129 aa9.66□□□□□ -0.86
PCDH8-201ENST00000338862 PDZD2O15018 2839 aa9.65□□□□□ -0.86
PCDH8-201ENST00000338862 APOC4P55056 127 aa9.65□□□□□ -0.86
PCDH8-201ENST00000338862 NANOS2P60321 138 aaKnown RBP9.65□□□□□ -0.86
PCDH8-201ENST00000338862 NKAPP1Q8N9T2 125 aa9.65□□□□□ -0.86
PCDH8-201ENST00000338862 RETNQ9HD89 108 aa9.65□□□□□ -0.86
PCDH8-201ENST00000338862 MGAM2Q2M2H8 2515 aa9.65□□□□□ -0.86
PCDH8-201ENST00000338862 MRAPQ8TCY5 172 aa9.65□□□□□ -0.86
PCDH8-201ENST00000338862 ZNF73O43830 326 aaPredicted RBP9.65□□□□□ -0.87
PCDH8-201ENST00000338862 A0A1B0GUV1 79 aa9.64□□□□□ -0.87
PCDH8-201ENST00000338862 LRCOL1A6NCL2 159 aa9.64□□□□□ -0.87
PCDH8-201ENST00000338862 X6R8D5 127 aa9.64□□□□□ -0.87
PCDH8-201ENST00000338862 RPL37AP8A6NKH3 93 aa9.63□□□□□ -0.87
PCDH8-201ENST00000338862 NBPF19A0A087WUL8 3843 aa9.63□□□□□ -0.87
PCDH8-201ENST00000338862 COL6A5A8TX70 2615 aa9.62□□□□□ -0.87
PCDH8-201ENST00000338862 KIAA0087Q14695 138 aa9.62□□□□□ -0.87
PCDH8-201ENST00000338862 PRR4Q16378 134 aa9.62□□□□□ -0.87
PCDH8-201ENST00000338862 A0A0U1RQV1 116 aa9.61□□□□□ -0.87
PCDH8-201ENST00000338862 INAFM1C9JVW0 142 aa9.61□□□□□ -0.87
PCDH8-201ENST00000338862 WFDC10BQ8IUB3 73 aa9.61□□□□□ -0.87
PCDH8-201ENST00000338862 ATP5EP2Q5VTU8 51 aa9.6□□□□□ -0.87
PCDH8-201ENST00000338862 MUC7Q8TAX7 377 aa9.6□□□□□ -0.87
PCDH8-201ENST00000338862 TM2D3Q9BRN9 247 aa9.6□□□□□ -0.87
PCDH8-201ENST00000338862 STAB1Q9NY15 2570 aa9.6□□□□□ -0.87
PCDH8-201ENST00000338862 LYRM9A8MSI8 78 aa9.6□□□□□ -0.87
PCDH8-201ENST00000338862 COX17Q14061 63 aa9.6□□□□□ -0.87
PCDH8-201ENST00000338862 Q6ZQT0 140 aa9.59□□□□□ -0.87
PCDH8-201ENST00000338862 C9orf66Q5T8R8 295 aa9.59□□□□□ -0.87
PCDH8-201ENST00000338862 NDUFC2O95298 119 aa9.58□□□□□ -0.88
PCDH8-201ENST00000338862 C6orf48Q9UBA6 75 aa9.58□□□□□ -0.88
PCDH8-201ENST00000338862 BPY2O14599 106 aa9.58□□□□□ -0.88
PCDH8-201ENST00000338862 BRK1Q8WUW1 75 aa9.58□□□□□ -0.88
PCDH8-201ENST00000338862 LY6G6DO95868 133 aa9.58□□□□□ -0.88
PCDH8-201ENST00000338862 OXLD1Q5BKU9 147 aa9.57□□□□□ -0.88
PCDH8-201ENST00000338862 OXTP01178 125 aa9.56□□□□□ -0.88
PCDH8-201ENST00000338862 LELP1Q5T871 98 aa9.56□□□□□ -0.88
PCDH8-201ENST00000338862 Q6ZRU5 148 aa9.56□□□□□ -0.88
PCDH8-201ENST00000338862 TRAV7A0A075B6U4 112 aa9.56□□□□□ -0.88
PCDH8-201ENST00000338862 UBE2BP63146 152 aa9.55□□□□□ -0.88
PCDH8-201ENST00000338862 KPRPQ5T749 579 aaPredicted RBP9.55□□□□□ -0.88
PCDH8-201ENST00000338862 FAM30AQ9NZY2 134 aa9.55□□□□□ -0.88
PCDH8-201ENST00000338862 TENM1Q9UKZ4 2725 aa9.55□□□□□ -0.88
PCDH8-201ENST00000338862 IGHV4-30-4P0DP06 118 aa9.54□□□□□ -0.88
PCDH8-201ENST00000338862 OBSCN-AS1Q96MR7 158 aa9.54□□□□□ -0.88
PCDH8-201ENST00000338862 KRTAP10-3P60369 221 aa9.54□□□□□ -0.88
PCDH8-201ENST00000338862 KRTAP1-3Q8IUG1 177 aa9.54□□□□□ -0.88
PCDH8-201ENST00000338862 DEFB116Q30KQ4 102 aa9.53□□□□□ -0.88
PCDH8-201ENST00000338862 ZNF469Q96JG9 3925 aaPredicted RBP9.53□□□□□ -0.88
PCDH8-201ENST00000338862 PKD1L1Q8TDX9 2849 aa9.52□□□□□ -0.89
PCDH8-201ENST00000338862 ETDCA0A1B0GVM5 59 aa9.52□□□□□ -0.89
PCDH8-201ENST00000338862 Q6ZTC4 211 aa9.52□□□□□ -0.89
PCDH8-201ENST00000338862 MIFP14174 115 aa9.52□□□□□ -0.89
PCDH8-201ENST00000338862 A0A096LNI7 61 aa9.51□□□□□ -0.89
PCDH8-201ENST00000338862 LINC00474Q9P2X8 69 aa9.51□□□□□ -0.89
PCDH8-201ENST00000338862 LYPD5Q6UWN5 251 aa9.51□□□□□ -0.89
PCDH8-201ENST00000338862 PDE6GP18545 87 aa9.5□□□□□ -0.89
PCDH8-201ENST00000338862 IGKV2-24A0A0C4DH68 120 aa9.49□□□□□ -0.89
PCDH8-201ENST00000338862 FUSP35637 526 aaKnown RBP eCLIP9.49□□□□□ -0.89
PCDH8-201ENST00000338862 RPS28P62857 69 aaKnown RBP9.49□□□□□ -0.89
PCDH8-201ENST00000338862 M0R378 163 aa9.48□□□□□ -0.89
PCDH8-201ENST00000338862 SYCNQ0VAF6 134 aa9.48□□□□□ -0.89
PCDH8-201ENST00000338862 NSD1Q96L73 2696 aaPredicted RBP9.48□□□□□ -0.89
PCDH8-201ENST00000338862 J3QKU1 62 aa9.47□□□□□ -0.89
PCDH8-201ENST00000338862 AKAP9Q99996 3911 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms