RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TINCRA0A1B0GVN0 87 aa6.39□□□□□ -1.39
CAPN3-202ENST00000337571 RPL28P46779 137 aaKnown RBP6.39□□□□□ -1.39
CAPN3-202ENST00000337571 PRR4Q16378 134 aa6.39□□□□□ -1.39
CAPN3-202ENST00000337571 PDZD11Q5EBL8 140 aa6.39□□□□□ -1.39
CAPN3-202ENST00000337571 COX7B2Q8TF08 81 aa6.39□□□□□ -1.39
CAPN3-202ENST00000337571 TP73-AS1Q9UF72 201 aa6.39□□□□□ -1.39
CAPN3-202ENST00000337571 SERF1AO75920 110 aa6.38□□□□□ -1.39
CAPN3-202ENST00000337571 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
CAPN3-202ENST00000337571 BCE1O60756 84 aa6.37□□□□□ -1.39
CAPN3-202ENST00000337571 S100A6P06703 90 aa6.37□□□□□ -1.39
CAPN3-202ENST00000337571 PMVKQ15126 192 aa6.37□□□□□ -1.39
CAPN3-202ENST00000337571 CST9LQ9H4G1 147 aa6.37□□□□□ -1.39
CAPN3-202ENST00000337571 LPAP08519 4548 aa6.37□□□□□ -1.39
CAPN3-202ENST00000337571 RPL37AP8A6NKH3 93 aa6.36□□□□□ -1.39
CAPN3-202ENST00000337571 SMIM1B2RUZ4 78 aa6.36□□□□□ -1.39
CAPN3-202ENST00000337571 H3BRM9 83 aa6.36□□□□□ -1.39
CAPN3-202ENST00000337571 FA2HQ7L5A8 372 aa6.36□□□□□ -1.39
CAPN3-202ENST00000337571 NKAPP1Q8N9T2 125 aa6.36□□□□□ -1.39
CAPN3-202ENST00000337571 HIST1H2BLQ99880 126 aa6.36□□□□□ -1.39
CAPN3-202ENST00000337571 ATP5LO75964 103 aa6.35□□□□□ -1.39
CAPN3-202ENST00000337571 SPINK8P0C7L1 97 aa6.35□□□□□ -1.39
CAPN3-202ENST00000337571 LINC00167Q96N53 147 aa6.35□□□□□ -1.39
CAPN3-202ENST00000337571 IGLV5-45A0A087WSX0 123 aa6.34□□□□□ -1.39
CAPN3-202ENST00000337571 GAGE10A6NGK3 116 aa6.34□□□□□ -1.39
CAPN3-202ENST00000337571 TSPAN13O95857 204 aa6.34□□□□□ -1.39
CAPN3-202ENST00000337571 CRYGAP11844 174 aa6.34□□□□□ -1.39
CAPN3-202ENST00000337571 BAGE3Q86Y29 109 aa6.34□□□□□ -1.39
CAPN3-202ENST00000337571 TYMSOSQ8TAI1 123 aa6.34□□□□□ -1.39
CAPN3-202ENST00000337571 A0A096LNJ9 63 aa6.33□□□□□ -1.4
CAPN3-202ENST00000337571 LINC01546A6NGU7 62 aa6.33□□□□□ -1.4
CAPN3-202ENST00000337571 UBE2AP49459 152 aa6.33□□□□□ -1.4
CAPN3-202ENST00000337571 FAM19A2Q8N3H0 131 aa6.33□□□□□ -1.4
CAPN3-202ENST00000337571 FABP4P15090 132 aa6.32□□□□□ -1.4
CAPN3-202ENST00000337571 PFN2P35080 140 aa6.32□□□□□ -1.4
CAPN3-202ENST00000337571 KRTAP4-7Q9BYR0 210 aa6.32□□□□□ -1.4
CAPN3-202ENST00000337571 IGLV5-37A0A075B6J1 123 aa6.31□□□□□ -1.4
CAPN3-202ENST00000337571 LINC00614P0C842 121 aa6.31□□□□□ -1.4
CAPN3-202ENST00000337571 PMCHL1Q16048 86 aa6.31□□□□□ -1.4
CAPN3-202ENST00000337571 RPL24P83731 157 aaKnown RBP6.3□□□□□ -1.4
CAPN3-202ENST00000337571 PYY3Q5JQD4 70 aa6.3□□□□□ -1.4
CAPN3-202ENST00000337571 CHCHD1Q96BP2 118 aaKnown RBP6.3□□□□□ -1.4
CAPN3-202ENST00000337571 IGKV2-28A0A075B6P5 120 aa6.29□□□□□ -1.4
CAPN3-202ENST00000337571 A0A087X002 238 aa6.29□□□□□ -1.4
CAPN3-202ENST00000337571 IGKV2D-28P01615 120 aa6.29□□□□□ -1.4
CAPN3-202ENST00000337571 AKR1D1P51857 326 aa6.29□□□□□ -1.4
CAPN3-202ENST00000337571 COX17Q14061 63 aa6.29□□□□□ -1.4
CAPN3-202ENST00000337571 LINC00518Q8N0U6 118 aa6.29□□□□□ -1.4
CAPN3-202ENST00000337571 CDIP1Q9H305 208 aa6.29□□□□□ -1.4
CAPN3-202ENST00000337571 IGKV2D-26A0A0A0MRZ7 120 aa6.28□□□□□ -1.4
CAPN3-202ENST00000337571 IGLC3P0DOY3 106 aa6.28□□□□□ -1.4
CAPN3-202ENST00000337571 SFTA2Q6UW10 78 aa6.28□□□□□ -1.4
CAPN3-202ENST00000337571 ERG28Q9UKR5 140 aa6.28□□□□□ -1.4
CAPN3-202ENST00000337571 A0A0U1RQV1 116 aa6.27□□□□□ -1.41
CAPN3-202ENST00000337571 HBDP02042 147 aa6.27□□□□□ -1.41
CAPN3-202ENST00000337571 S100A2P29034 98 aa6.27□□□□□ -1.41
CAPN3-202ENST00000337571 FAM229BQ4G0N7 80 aa6.27□□□□□ -1.41
CAPN3-202ENST00000337571 SND1-IT1Q9HBX3 110 aa6.27□□□□□ -1.41
CAPN3-202ENST00000337571 ANAPC11Q9NYG5 84 aa6.27□□□□□ -1.41
CAPN3-202ENST00000337571 IGLV5-39A0A0G2JS06 123 aa6.26□□□□□ -1.41
CAPN3-202ENST00000337571 HSBP1O75506 76 aa6.26□□□□□ -1.41
CAPN3-202ENST00000337571 C3orf79P0CE67 100 aa6.26□□□□□ -1.41
CAPN3-202ENST00000337571 ZNF22P17026 224 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-202ENST00000337571 JOSD1Q15040 202 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-202ENST00000337571 TMEM170BQ5T4T1 132 aa6.26□□□□□ -1.41
CAPN3-202ENST00000337571 FAM19A1Q7Z5A9 133 aa6.26□□□□□ -1.41
CAPN3-202ENST00000337571 ZNF625Q96I27 306 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-202ENST00000337571 KRTAP13-1Q8IUC0 172 aa6.25□□□□□ -1.41
CAPN3-202ENST00000337571 TMEM126AQ9H061 195 aa6.25□□□□□ -1.41
CAPN3-202ENST00000337571 VPREB1P12018 145 aa6.24□□□□□ -1.41
CAPN3-202ENST00000337571 LINC00158P58513 81 aa6.24□□□□□ -1.41
CAPN3-202ENST00000337571 PRLHP81277 87 aa6.24□□□□□ -1.41
CAPN3-202ENST00000337571 LINC00304Q8N9R0 145 aa6.24□□□□□ -1.41
CAPN3-202ENST00000337571 TMEM238C9JI98 176 aa6.23□□□□□ -1.41
CAPN3-202ENST00000337571 SMIM6P0DI80 62 aa6.23□□□□□ -1.41
CAPN3-202ENST00000337571 KRTAP13-2Q52LG2 175 aa6.23□□□□□ -1.41
CAPN3-202ENST00000337571 C12orf57Q99622 126 aa6.23□□□□□ -1.41
CAPN3-202ENST00000337571 CHTOPQ9Y3Y2 248 aaKnown RBP6.23□□□□□ -1.41
CAPN3-202ENST00000337571 C11orf86A6NJI1 115 aa6.22□□□□□ -1.41
CAPN3-202ENST00000337571 KRTAP4-9Q9BYQ8 210 aa6.22□□□□□ -1.41
CAPN3-202ENST00000337571 MUC2Q02817 5179 aa6.21□□□□□ -1.42
CAPN3-202ENST00000337571 SYS1-DBNDD2H3BUS1 97 aa6.21□□□□□ -1.42
CAPN3-202ENST00000337571 M0R378 163 aa6.21□□□□□ -1.42
CAPN3-202ENST00000337571 LEPROTL1O95214 131 aa6.21□□□□□ -1.42
CAPN3-202ENST00000337571 KRTDAPP60985 99 aa6.21□□□□□ -1.42
CAPN3-202ENST00000337571 RETNLBQ9BQ08 111 aa6.21□□□□□ -1.42
CAPN3-202ENST00000337571 HIGD2AQ9BW72 106 aa6.21□□□□□ -1.42
CAPN3-202ENST00000337571 A0A0U1RRA0 63 aa6.2□□□□□ -1.42
CAPN3-202ENST00000337571 CTAG1AP78358 180 aa6.2□□□□□ -1.42
CAPN3-202ENST00000337571 PLEKHB2Q96CS7 222 aa6.2□□□□□ -1.42
CAPN3-202ENST00000337571 LINC01545Q5VT33 79 aa6.19□□□□□ -1.42
CAPN3-202ENST00000337571 IFI27L1Q96BM0 104 aa6.19□□□□□ -1.42
CAPN3-202ENST00000337571 IGLV7-46A0A075B6I9 117 aa6.18□□□□□ -1.42
CAPN3-202ENST00000337571 TRAV12-1A0A0B4J245 112 aa6.18□□□□□ -1.42
CAPN3-202ENST00000337571 TMEM223A0PJW6 202 aa6.18□□□□□ -1.42
CAPN3-202ENST00000337571 LINC00587B1AMM8 73 aa6.18□□□□□ -1.42
CAPN3-202ENST00000337571 SCGB1D1O95968 90 aa6.18□□□□□ -1.42
CAPN3-202ENST00000337571 S100A12P80511 92 aa6.18□□□□□ -1.42
CAPN3-202ENST00000337571 MEIG1Q5JSS6 88 aa6.18□□□□□ -1.42
CAPN3-202ENST00000337571 SPAG11AQ6PDA7 123 aa6.18□□□□□ -1.42
CAPN3-202ENST00000337571 PET117Q6UWS5 81 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms