RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 MXRA5Q9NR99 2828 aa8.22□□□□□ -1.09
SHMT2-201ENST00000328923 SYCNQ0VAF6 134 aa8.22□□□□□ -1.09
SHMT2-201ENST00000328923 TOMM7Q9P0U1 55 aa8.22□□□□□ -1.09
SHMT2-201ENST00000328923 A8MUN3 132 aa8.21□□□□□ -1.1
SHMT2-201ENST00000328923 LY6G6DO95868 133 aa8.21□□□□□ -1.1
SHMT2-201ENST00000328923 HTN1P15515 57 aa8.21□□□□□ -1.1
SHMT2-201ENST00000328923 LOC110117498A0A087WWA1 95 aa8.2□□□□□ -1.1
SHMT2-201ENST00000328923 TRBV6-4A0A1B0GX49 114 aa8.2□□□□□ -1.1
SHMT2-201ENST00000328923 H3BUX3 64 aa8.2□□□□□ -1.1
SHMT2-201ENST00000328923 LY6EQ16553 131 aa8.2□□□□□ -1.1
SHMT2-201ENST00000328923 CD164L2Q6UWJ8 174 aa8.2□□□□□ -1.1
SHMT2-201ENST00000328923 COX7B2Q8TF08 81 aa8.2□□□□□ -1.1
SHMT2-201ENST00000328923 H3BS24 57 aa8.19□□□□□ -1.1
SHMT2-201ENST00000328923 KRTAP10-9P60411 292 aa8.19□□□□□ -1.1
SHMT2-201ENST00000328923 NTM-AS1Q6ZSK4 140 aa8.19□□□□□ -1.1
SHMT2-201ENST00000328923 Q8N9L7 120 aa8.19□□□□□ -1.1
SHMT2-201ENST00000328923 OCR1Q9BZK8 76 aa8.19□□□□□ -1.1
SHMT2-201ENST00000328923 PRM2P04554 102 aa8.18□□□□□ -1.1
SHMT2-201ENST00000328923 UBE2BP63146 152 aa8.18□□□□□ -1.1
SHMT2-201ENST00000328923 NANOS2P60321 138 aaKnown RBP8.18□□□□□ -1.1
SHMT2-201ENST00000328923 NIPBLQ6KC79 2804 aaeCLIP8.17□□□□□ -1.1
SHMT2-201ENST00000328923 TLN2Q9Y4G6 2542 aa8.17□□□□□ -1.1
SHMT2-201ENST00000328923 PRR3P79522 188 aaKnown RBP8.17□□□□□ -1.1
SHMT2-201ENST00000328923 SPTSSBQ8NFR3 76 aa8.17□□□□□ -1.1
SHMT2-201ENST00000328923 MAPK1IP1LQ8NDC0 245 aa8.16□□□□□ -1.1
SHMT2-201ENST00000328923 ACANP16112 2415 aa8.15□□□□□ -1.1
SHMT2-201ENST00000328923 C16orf90A8MZG2 172 aa8.15□□□□□ -1.1
SHMT2-201ENST00000328923 SPATA3Q8NHX4 192 aa8.15□□□□□ -1.1
SHMT2-201ENST00000328923 C8orf87E5RJ46 101 aa8.14□□□□□ -1.11
SHMT2-201ENST00000328923 PRB2P02812 416 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-201ENST00000328923 Q5VV11 94 aa8.14□□□□□ -1.11
SHMT2-201ENST00000328923 ZNF73O43830 326 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-201ENST00000328923 LINC00269Q8N2A0 174 aa8.14□□□□□ -1.11
SHMT2-201ENST00000328923 K7EQD1 137 aa8.13□□□□□ -1.11
SHMT2-201ENST00000328923 LINC01006Q8NI28 216 aa8.13□□□□□ -1.11
SHMT2-201ENST00000328923 ESM1Q9NQ30 184 aa8.13□□□□□ -1.11
SHMT2-201ENST00000328923 DEFB113Q30KQ7 82 aa8.13□□□□□ -1.11
SHMT2-201ENST00000328923 CDC42SE2Q9NRR3 84 aa8.13□□□□□ -1.11
SHMT2-201ENST00000328923 CR1P17927 2039 aa8.13□□□□□ -1.11
SHMT2-201ENST00000328923 FLNAP21333 2647 aaKnown RBP8.13□□□□□ -1.11
SHMT2-201ENST00000328923 DEFB112Q30KQ8 113 aa8.12□□□□□ -1.11
SHMT2-201ENST00000328923 PSCAO43653 123 aa8.11□□□□□ -1.11
SHMT2-201ENST00000328923 IGHV4-59P01825 116 aa8.11□□□□□ -1.11
SHMT2-201ENST00000328923 IGHV4-31P0DP07 118 aa8.11□□□□□ -1.11
SHMT2-201ENST00000328923 PRR4Q16378 134 aa8.11□□□□□ -1.11
SHMT2-201ENST00000328923 IGKV4-1P06312 121 aa8.1□□□□□ -1.11
SHMT2-201ENST00000328923 DEFB131AP59861 70 aa8.1□□□□□ -1.11
SHMT2-201ENST00000328923 KRTAP1-3Q8IUG1 177 aa8.1□□□□□ -1.11
SHMT2-201ENST00000328923 IGKV3OR2-268A0A0C4DH90 116 aa8.1□□□□□ -1.11
SHMT2-201ENST00000328923 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
SHMT2-201ENST00000328923 NDUFS5O43920 106 aa8.1□□□□□ -1.11
SHMT2-201ENST00000328923 C6orf99Q4VX62 202 aa8.1□□□□□ -1.11
SHMT2-201ENST00000328923 MUC7Q8TAX7 377 aa8.1□□□□□ -1.11
SHMT2-201ENST00000328923 CHKB-CPT1BH3BT56 60 aa8.09□□□□□ -1.11
SHMT2-201ENST00000328923 INSP01308 110 aa8.09□□□□□ -1.11
SHMT2-201ENST00000328923 C9orf66Q5T8R8 295 aa8.09□□□□□ -1.11
SHMT2-201ENST00000328923 FSHBP01225 129 aa8.09□□□□□ -1.11
SHMT2-201ENST00000328923 A6NN06 94 aa8.08□□□□□ -1.12
SHMT2-201ENST00000328923 UBE2AP49459 152 aa8.08□□□□□ -1.12
SHMT2-201ENST00000328923 LINC00575Q6W349 94 aa8.08□□□□□ -1.12
SHMT2-201ENST00000328923 C11orf44Q8N8P7 122 aa8.08□□□□□ -1.12
SHMT2-201ENST00000328923 FAM30AQ9NZY2 134 aa8.08□□□□□ -1.12
SHMT2-201ENST00000328923 SONP18583 2426 aaKnown RBP8.08□□□□□ -1.12
SHMT2-201ENST00000328923 CELA1Q9UNI1 258 aa8.08□□□□□ -1.12
SHMT2-201ENST00000328923 HCG22E2RYF7 251 aa8.07□□□□□ -1.12
SHMT2-201ENST00000328923 PHF5AQ7RTV0 110 aaKnown RBP8.07□□□□□ -1.12
SHMT2-201ENST00000328923 LINC00612Q8N6U2 182 aa8.06□□□□□ -1.12
SHMT2-201ENST00000328923 C10orf99Q6UWK7 81 aa8.06□□□□□ -1.12
SHMT2-201ENST00000328923 Q6YL49 198 aa8.06□□□□□ -1.12
SHMT2-201ENST00000328923 KRTAP21-3Q3LHN1 58 aa8.05□□□□□ -1.12
SHMT2-201ENST00000328923 LCA10Q71F78 164 aa8.05□□□□□ -1.12
SHMT2-201ENST00000328923 UBE2L6O14933 153 aa8.05□□□□□ -1.12
SHMT2-201ENST00000328923 PDE6GP18545 87 aa8.05□□□□□ -1.12
SHMT2-201ENST00000328923 NSD1Q96L73 2696 aaPredicted RBP8.05□□□□□ -1.12
SHMT2-201ENST00000328923 IGLV4-60A0A075B6I1 120 aa8.04□□□□□ -1.12
SHMT2-201ENST00000328923 TRBV6-8A0A0A6YYG3 113 aa8.04□□□□□ -1.12
SHMT2-201ENST00000328923 C10orf25Q5T742 122 aa8.04□□□□□ -1.12
SHMT2-201ENST00000328923 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.04□□□□□ -1.12
SHMT2-201ENST00000328923 MAP6D1Q9H9H5 199 aa8.04□□□□□ -1.12
SHMT2-201ENST00000328923 ATP11AUNQ6ZP68 121 aa8.04□□□□□ -1.12
SHMT2-201ENST00000328923 Q6ZQY7 126 aa8.03□□□□□ -1.12
SHMT2-201ENST00000328923 SMIM29Q86T20 159 aa8.02□□□□□ -1.12
SHMT2-201ENST00000328923 TRGV1A0A0A0MS02 117 aa8.02□□□□□ -1.13
SHMT2-201ENST00000328923 C7orf65Q6ZTY9 151 aa8.02□□□□□ -1.13
SHMT2-201ENST00000328923 JMJD1CQ15652 2540 aa8.02□□□□□ -1.13
SHMT2-201ENST00000328923 IGHV3OR16-9A0A0B4J2B5 98 aa8.01□□□□□ -1.13
SHMT2-201ENST00000328923 DIRC1Q969H9 104 aa8.01□□□□□ -1.13
SHMT2-201ENST00000328923 ZNF702PQ9H963 129 aa8.01□□□□□ -1.13
SHMT2-201ENST00000328923 ZCCHC13Q8WW36 166 aaKnown RBP8□□□□□ -1.13
SHMT2-201ENST00000328923 PRR15LQ9BU68 103 aa8□□□□□ -1.13
SHMT2-201ENST00000328923 CYP4F30PQ9H0H9 118 aa8□□□□□ -1.13
SHMT2-201ENST00000328923 Q8NDZ9 215 aa8□□□□□ -1.13
SHMT2-201ENST00000328923 LCE6AA0A183 80 aa7.99□□□□□ -1.13
SHMT2-201ENST00000328923 SLURP1P55000 103 aa7.98□□□□□ -1.13
SHMT2-201ENST00000328923 FN1P02751 2386 aaKnown RBP7.97□□□□□ -1.13
SHMT2-201ENST00000328923 Q8N9P0 234 aaPredicted RBP7.97□□□□□ -1.13
SHMT2-201ENST00000328923 SMR3AQ99954 134 aa7.97□□□□□ -1.13
SHMT2-201ENST00000328923 A6NED7 52 aa7.96□□□□□ -1.13
SHMT2-201ENST00000328923 DNHD1Q96M86 4753 aa7.96□□□□□ -1.13
SHMT2-201ENST00000328923 WNK1Q9H4A3 2382 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms