RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CCDC179H3BU77 68 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 M0QXV9 152 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 MYMXA0A1B0GTQ4 84 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 F5H768 121 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 EMP1P54849 157 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 MRPL23Q16540 153 aaKnown RBP4.31□□□□□ -1.72
CSTF3-201ENST00000323959 ESRGQ1W209 222 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 TMEM101Q96IK0 257 aa4.31□□□□□ -1.72
CSTF3-201ENST00000323959 IGHV1-58A0A0C4DH39 117 aa4.3□□□□□ -1.72
CSTF3-201ENST00000323959 ICOSQ9Y6W8 199 aa4.3□□□□□ -1.72
CSTF3-201ENST00000323959 PAX4O43316 350 aa4.3□□□□□ -1.72
CSTF3-201ENST00000323959 GYPEP15421 78 aa4.29□□□□□ -1.72
CSTF3-201ENST00000323959 PSMB2P49721 201 aa4.29□□□□□ -1.72
CSTF3-201ENST00000323959 SCGB1C2P0DMR2 95 aa4.29□□□□□ -1.72
CSTF3-201ENST00000323959 MEIG1Q5JSS6 88 aa4.29□□□□□ -1.72
CSTF3-201ENST00000323959 LINC00242Q5T6M2 205 aa4.29□□□□□ -1.72
CSTF3-201ENST00000323959 SPANXDQ9BXN6 97 aa4.29□□□□□ -1.72
CSTF3-201ENST00000323959 TTTY13Q9BZ97 58 aa4.29□□□□□ -1.72
CSTF3-201ENST00000323959 SPANXCQ9NY87 97 aa4.29□□□□□ -1.72
CSTF3-201ENST00000323959 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.28□□□□□ -1.72
CSTF3-201ENST00000323959 IGKV2-29A2NJV5 120 aaPredicted RBP4.28□□□□□ -1.72
CSTF3-201ENST00000323959 UBE2L6O14933 153 aa4.28□□□□□ -1.72
CSTF3-201ENST00000323959 PRR34Q9NV39 138 aa4.28□□□□□ -1.72
CSTF3-201ENST00000323959 A0A096LPF7 62 aa4.27□□□□□ -1.73
CSTF3-201ENST00000323959 LOC107984156A0A0G2JMH3 177 aa4.27□□□□□ -1.73
CSTF3-201ENST00000323959 LOC100131303A0A0U1RQF7 123 aa4.27□□□□□ -1.73
CSTF3-201ENST00000323959 F8WDY8 70 aa4.27□□□□□ -1.73
CSTF3-201ENST00000323959 J3QQQ9 107 aa4.27□□□□□ -1.73
CSTF3-201ENST00000323959 NDUFA1O15239 70 aa4.27□□□□□ -1.73
CSTF3-201ENST00000323959 DEFB130BP0DP73 79 aa4.27□□□□□ -1.73
CSTF3-201ENST00000323959 DEFB130AP0DP74 79 aa4.27□□□□□ -1.73
CSTF3-201ENST00000323959 ARL17AQ8IVW1 177 aa4.27□□□□□ -1.73
CSTF3-201ENST00000323959 REG3GQ6UW15 175 aa4.27□□□□□ -1.73
CSTF3-201ENST00000323959 ANKRD29Q8N6D5 301 aa4.27□□□□□ -1.73
CSTF3-201ENST00000323959 A0A087WZ39 114 aa4.26□□□□□ -1.73
CSTF3-201ENST00000323959 IGHV3OR16-9A0A0B4J2B5 98 aa4.26□□□□□ -1.73
CSTF3-201ENST00000323959 IGHV3-38A0A0C4DH36 116 aa4.26□□□□□ -1.73
CSTF3-201ENST00000323959 A0A0J9YY99 117 aa4.26□□□□□ -1.73
CSTF3-201ENST00000323959 PSCAO43653 123 aa4.26□□□□□ -1.73
CSTF3-201ENST00000323959 DGAT2L7PQ6IED9 249 aa4.26□□□□□ -1.73
CSTF3-201ENST00000323959 OPRPNQ99935 248 aaPredicted RBP4.26□□□□□ -1.73
CSTF3-201ENST00000323959 KRTAP3-3Q9BYR6 98 aa4.26□□□□□ -1.73
CSTF3-201ENST00000323959 KRTAP3-2Q9BYR7 98 aa4.26□□□□□ -1.73
CSTF3-201ENST00000323959 SMIM1B2RUZ4 78 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 IGHV3-30-3P0DP02 117 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 LYPD5Q6UWN5 251 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 C10orf126Q8N4M7 172 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 COPS9Q8WXC6 57 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 LITAFQ99732 161 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 TRAV8-4A0A0B4J246 113 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 LINC00959A0A1B0GUT2 108 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 TCL1BO95988 128 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 LGALS3P17931 250 aaKnown RBP4.25□□□□□ -1.73
CSTF3-201ENST00000323959 TSPEAR-AS2P59090 65 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 ZNF625Q96I27 306 aaPredicted RBP4.25□□□□□ -1.73
CSTF3-201ENST00000323959 NEBP20929 6669 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 ZNF815PA8K554 130 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 SLC25A20O43772 301 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 TMEM170BQ5T4T1 132 aa4.25□□□□□ -1.73
CSTF3-201ENST00000323959 A0A1B0GX51 115 aa4.24□□□□□ -1.73
CSTF3-201ENST00000323959 IGHV3-30P01768 117 aa4.24□□□□□ -1.73
CSTF3-201ENST00000323959 IGHV3-30-5P0DP03 117 aa4.24□□□□□ -1.73
CSTF3-201ENST00000323959 CXCL5P42830 114 aa4.24□□□□□ -1.73
CSTF3-201ENST00000323959 CD164L2Q6UWJ8 174 aa4.24□□□□□ -1.73
CSTF3-201ENST00000323959 IGLV4-60A0A075B6I1 120 aa4.24□□□□□ -1.73
CSTF3-201ENST00000323959 RPL13AP40429 203 aaKnown RBP4.24□□□□□ -1.73
CSTF3-201ENST00000323959 RPS28P62857 69 aaKnown RBP4.24□□□□□ -1.73
CSTF3-201ENST00000323959 COX6A2Q02221 97 aa4.24□□□□□ -1.73
CSTF3-201ENST00000323959 SRSF9Q13242 221 aaKnown RBP eCLIP4.24□□□□□ -1.73
CSTF3-201ENST00000323959 SS18Q15532 418 aa4.24□□□□□ -1.73
CSTF3-201ENST00000323959 LINC01556Q5JQF7 62 aa4.24□□□□□ -1.73
CSTF3-201ENST00000323959 Q8IZM0 81 aa4.24□□□□□ -1.73
CSTF3-201ENST00000323959 CDKN2A-AS1Q9UH64 79 aa4.24□□□□□ -1.73
CSTF3-201ENST00000323959 J3KT08 172 aa4.23□□□□□ -1.73
CSTF3-201ENST00000323959 OR13C6PQ8NH95 151 aa4.23□□□□□ -1.73
CSTF3-201ENST00000323959 CHCHD5Q9BSY4 110 aa4.23□□□□□ -1.73
CSTF3-201ENST00000323959 A0A0B4J2C4 111 aa4.23□□□□□ -1.73
CSTF3-201ENST00000323959 IMUPQ9GZP8 106 aa4.23□□□□□ -1.73
CSTF3-201ENST00000323959 GVQW2A0A096LPI5 108 aaPredicted RBP4.22□□□□□ -1.73
CSTF3-201ENST00000323959 TRBV7-7A0A0K0K1E9 115 aa4.22□□□□□ -1.73
CSTF3-201ENST00000323959 FAM240AA0A1B0GVK7 77 aa4.22□□□□□ -1.73
CSTF3-201ENST00000323959 COX17Q14061 63 aa4.22□□□□□ -1.73
CSTF3-201ENST00000323959 C9JAW5 83 aa4.22□□□□□ -1.73
CSTF3-201ENST00000323959 MIAQ16674 131 aa4.22□□□□□ -1.73
CSTF3-201ENST00000323959 SCGB1D4Q6XE38 83 aa4.22□□□□□ -1.73
CSTF3-201ENST00000323959 NDUFA12Q9UI09 145 aa4.22□□□□□ -1.73
CSTF3-201ENST00000323959 IGHV3-64A0A075B6Q5 118 aa4.21□□□□□ -1.73
CSTF3-201ENST00000323959 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.21□□□□□ -1.73
CSTF3-201ENST00000323959 KRTAP26-1Q6PEX3 210 aa4.21□□□□□ -1.73
CSTF3-201ENST00000323959 PRO1854Q9UHT4 67 aa4.21□□□□□ -1.73
CSTF3-201ENST00000323959 IBA57-AS1B1ANH7 110 aa4.21□□□□□ -1.74
CSTF3-201ENST00000323959 COX7B2Q8TF08 81 aa4.21□□□□□ -1.74
CSTF3-201ENST00000323959 UQCRQO14949 82 aa4.2□□□□□ -1.74
CSTF3-201ENST00000323959 REG3AQ06141 175 aa4.2□□□□□ -1.74
CSTF3-201ENST00000323959 ATXN8Q156A1 80 aa4.2□□□□□ -1.74
CSTF3-201ENST00000323959 C3orf22Q8N5N4 141 aa4.2□□□□□ -1.74
CSTF3-201ENST00000323959 TRBV10-2A0A0K0K1G8 114 aa4.2□□□□□ -1.74
CSTF3-201ENST00000323959 CFC1P0CG37 223 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms