RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 Q6ZVQ6 151 aa12.22□□□□□ -0.45
PRKCB-202ENST00000321728 KRTAP1-3Q8IUG1 177 aa12.22□□□□□ -0.45
PRKCB-202ENST00000321728 HIVEP2P31629 2446 aa12.21□□□□□ -0.45
PRKCB-202ENST00000321728 TRAV10A0A0B4J240 114 aa12.21□□□□□ -0.45
PRKCB-202ENST00000321728 SNURFQ9Y675 71 aa12.21□□□□□ -0.45
PRKCB-202ENST00000321728 IGLV1-51P01701 117 aa12.21□□□□□ -0.46
PRKCB-202ENST00000321728 ANGP03950 147 aaKnown RBP12.21□□□□□ -0.46
PRKCB-202ENST00000321728 Q8N3U1 123 aa12.21□□□□□ -0.46
PRKCB-202ENST00000321728 IGHV4-28A0A0C4DH34 117 aa12.2□□□□□ -0.46
PRKCB-202ENST00000321728 C6orf223Q8N319 242 aa12.2□□□□□ -0.46
PRKCB-202ENST00000321728 Q6ZQY7 126 aa12.2□□□□□ -0.46
PRKCB-202ENST00000321728 ZNF843Q8N446 348 aa12.2□□□□□ -0.46
PRKCB-202ENST00000321728 LINC00482Q8N8I6 264 aa12.2□□□□□ -0.46
PRKCB-202ENST00000321728 PRO0255Q9UI72 69 aa12.19□□□□□ -0.46
PRKCB-202ENST00000321728 SERP1Q9Y6X1 66 aa12.19□□□□□ -0.46
PRKCB-202ENST00000321728 BCE1O60756 84 aa12.18□□□□□ -0.46
PRKCB-202ENST00000321728 REG3AQ06141 175 aa12.18□□□□□ -0.46
PRKCB-202ENST00000321728 SPATA3Q8NHX4 192 aa12.17□□□□□ -0.46
PRKCB-202ENST00000321728 LINC01006Q8NI28 216 aa12.17□□□□□ -0.46
PRKCB-202ENST00000321728 RMI2Q96E14 147 aa12.17□□□□□ -0.46
PRKCB-202ENST00000321728 C10orf25Q5T742 122 aa12.17□□□□□ -0.46
PRKCB-202ENST00000321728 UNQ6190/PRO20217Q6UXQ8 127 aa12.17□□□□□ -0.46
PRKCB-202ENST00000321728 KLKP1Q107X0 134 aa12.16□□□□□ -0.46
PRKCB-202ENST00000321728 NOTCH2Q04721 2471 aa12.15□□□□□ -0.46
PRKCB-202ENST00000321728 SCXQ7RTU7 201 aa12.14□□□□□ -0.47
PRKCB-202ENST00000321728 LINC00612Q8N6U2 182 aa12.14□□□□□ -0.47
PRKCB-202ENST00000321728 F8WEM9 126 aa12.14□□□□□ -0.47
PRKCB-202ENST00000321728 DEFB4AO15263 64 aa12.14□□□□□ -0.47
PRKCB-202ENST00000321728 PDE6GP18545 87 aa12.13□□□□□ -0.47
PRKCB-202ENST00000321728 CXCL6P80162 114 aa12.13□□□□□ -0.47
PRKCB-202ENST00000321728 SPAG11BQ08648 103 aa12.13□□□□□ -0.47
PRKCB-202ENST00000321728 IGLV6-57P01721 117 aa12.12□□□□□ -0.47
PRKCB-202ENST00000321728 MUC7Q8TAX7 377 aa12.12□□□□□ -0.47
PRKCB-202ENST00000321728 EPM2AB3EWF7 344 aa12.12□□□□□ -0.47
PRKCB-202ENST00000321728 C9orf66Q5T8R8 295 aa12.11□□□□□ -0.47
PRKCB-202ENST00000321728 CYSRT1A8MQ03 144 aa12.1□□□□□ -0.47
PRKCB-202ENST00000321728 TM2D3Q9BRN9 247 aa12.1□□□□□ -0.47
PRKCB-202ENST00000321728 FASNP49327 2511 aaKnown RBP12.09□□□□□ -0.47
PRKCB-202ENST00000321728 PDZD2O15018 2839 aa12.08□□□□□ -0.48
PRKCB-202ENST00000321728 X6R8D5 127 aa12.08□□□□□ -0.48
PRKCB-202ENST00000321728 DIRC1Q969H9 104 aa12.08□□□□□ -0.48
PRKCB-202ENST00000321728 ANK3Q12955 4377 aaKnown RBP12.08□□□□□ -0.48
PRKCB-202ENST00000321728 H3BQ85 93 aa12.07□□□□□ -0.48
PRKCB-202ENST00000321728 XAGE1AQ9HD64 81 aa12.07□□□□□ -0.48
PRKCB-202ENST00000321728 MRAPQ8TCY5 172 aa12.06□□□□□ -0.48
PRKCB-202ENST00000321728 LINC00336Q6ZUF6 198 aa12.06□□□□□ -0.48
PRKCB-202ENST00000321728 A0A0J9YWU9 116 aa12.05□□□□□ -0.48
PRKCB-202ENST00000321728 IGHV4-30-4P0DP06 118 aa12.05□□□□□ -0.48
PRKCB-202ENST00000321728 TENM1Q9UKZ4 2725 aa12.05□□□□□ -0.48
PRKCB-202ENST00000321728 SMIM26A0A096LP01 95 aa12.04□□□□□ -0.48
PRKCB-202ENST00000321728 TRBV7-4A0A0J9YYF1 115 aa12.04□□□□□ -0.48
PRKCB-202ENST00000321728 SMR3AQ99954 134 aa12.04□□□□□ -0.48
PRKCB-202ENST00000321728 ZNF73O43830 326 aaPredicted RBP12.03□□□□□ -0.48
PRKCB-202ENST00000321728 COX7BP24311 80 aa12.03□□□□□ -0.48
PRKCB-202ENST00000321728 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.03□□□□□ -0.48
PRKCB-202ENST00000321728 HELZ2Q9BYK8 2649 aaKnown RBP12.03□□□□□ -0.48
PRKCB-202ENST00000321728 NDUFC1O43677 76 aa12.02□□□□□ -0.49
PRKCB-202ENST00000321728 MIFP14174 115 aa12.02□□□□□ -0.49
PRKCB-202ENST00000321728 NREPQ16612 68 aa12.02□□□□□ -0.49
PRKCB-202ENST00000321728 FP248Q71RG6 208 aaPredicted RBP12.02□□□□□ -0.49
PRKCB-202ENST00000321728 KLK12Q9UKR0 248 aa12.01□□□□□ -0.49
PRKCB-202ENST00000321728 TRBV7-6A0A0J9YX20 115 aa12.01□□□□□ -0.49
PRKCB-202ENST00000321728 PRO0628Q9UI54 55 aa12.01□□□□□ -0.49
PRKCB-202ENST00000321728 LYRM9A8MSI8 78 aa12□□□□□ -0.49
PRKCB-202ENST00000321728 BPY2O14599 106 aa12□□□□□ -0.49
PRKCB-202ENST00000321728 HECTD1Q9ULT8 2610 aa11.99□□□□□ -0.49
PRKCB-202ENST00000321728 C6orf48Q9UBA6 75 aa11.99□□□□□ -0.49
PRKCB-202ENST00000321728 KRTAP1-1Q07627 177 aa11.99□□□□□ -0.49
PRKCB-202ENST00000321728 Q8N9L7 120 aa11.99□□□□□ -0.49
PRKCB-202ENST00000321728 LINC00474Q9P2X8 69 aa11.99□□□□□ -0.49
PRKCB-202ENST00000321728 UNC79Q9P2D8 2635 aa11.98□□□□□ -0.49
PRKCB-202ENST00000321728 DAD1P61803 113 aa11.98□□□□□ -0.49
PRKCB-202ENST00000321728 C16orf95Q9H693 158 aa11.98□□□□□ -0.49
PRKCB-202ENST00000321728 TMEM254Q8TBM7 123 aa11.98□□□□□ -0.49
PRKCB-202ENST00000321728 HTN3P15516 51 aa11.97□□□□□ -0.49
PRKCB-202ENST00000321728 ELOF1P60002 83 aaKnown RBP11.97□□□□□ -0.49
PRKCB-202ENST00000321728 KRTAP10-3P60369 221 aa11.97□□□□□ -0.49
PRKCB-202ENST00000321728 DEFB135Q30KP9 77 aa11.97□□□□□ -0.49
PRKCB-202ENST00000321728 ATRQ13535 2644 aa11.96□□□□□ -0.49
PRKCB-202ENST00000321728 TRRAPQ9Y4A5 3859 aa11.96□□□□□ -0.49
PRKCB-202ENST00000321728 GVQW2A0A096LPI5 108 aaPredicted RBP11.95□□□□□ -0.5
PRKCB-202ENST00000321728 ATP5EP56381 51 aaPredicted RBP11.94□□□□□ -0.5
PRKCB-202ENST00000321728 LELP1Q5T871 98 aa11.93□□□□□ -0.5
PRKCB-202ENST00000321728 C1orf43Q9BWL3 253 aa11.93□□□□□ -0.5
PRKCB-202ENST00000321728 HIVEP1P15822 2718 aa11.92□□□□□ -0.5
PRKCB-202ENST00000321728 PRR34Q9NV39 138 aa11.92□□□□□ -0.5
PRKCB-202ENST00000321728 HIGD2BQ4VC39 106 aa11.91□□□□□ -0.5
PRKCB-202ENST00000321728 CELA1Q9UNI1 258 aa11.91□□□□□ -0.5
PRKCB-202ENST00000321728 OTOGQ6ZRI0 2925 aa11.91□□□□□ -0.5
PRKCB-202ENST00000321728 VPREB1P12018 145 aa11.89□□□□□ -0.51
PRKCB-202ENST00000321728 CAMK2N2Q96S95 79 aa11.89□□□□□ -0.51
PRKCB-202ENST00000321728 PKD1L1Q8TDX9 2849 aa11.89□□□□□ -0.51
PRKCB-202ENST00000321728 IGKV4-1P06312 121 aa11.89□□□□□ -0.51
PRKCB-202ENST00000321728 ERC2-IT1O76042 136 aa11.88□□□□□ -0.51
PRKCB-202ENST00000321728 TEP1Q99973 2627 aaKnown RBP11.88□□□□□ -0.51
PRKCB-202ENST00000321728 C3orf84H3BNL1 204 aa11.87□□□□□ -0.51
PRKCB-202ENST00000321728 M0R378 163 aa11.87□□□□□ -0.51
PRKCB-202ENST00000321728 LINC00528Q8N1L1 170 aa11.87□□□□□ -0.51
PRKCB-202ENST00000321728 PRYO14603 147 aa11.86□□□□□ -0.51
PRKCB-202ENST00000321728 MPLKIPQ8TAP9 179 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms