RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 TMEM254Q8TBM7 123 aa9.49□□□□□ -0.89
SPAST-201ENST00000315285 LINC01556Q5JQF7 62 aa9.48□□□□□ -0.89
SPAST-201ENST00000315285 ESRGQ1W209 222 aa9.48□□□□□ -0.89
SPAST-201ENST00000315285 SPATA3Q8NHX4 192 aa9.48□□□□□ -0.89
SPAST-201ENST00000315285 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
SPAST-201ENST00000315285 A6NED7 52 aa9.47□□□□□ -0.89
SPAST-201ENST00000315285 PRLHP81277 87 aa9.47□□□□□ -0.89
SPAST-201ENST00000315285 DEFB116Q30KQ4 102 aa9.46□□□□□ -0.89
SPAST-201ENST00000315285 PRR15LQ9BU68 103 aa9.45□□□□□ -0.9
SPAST-201ENST00000315285 KIAA0087Q14695 138 aa9.45□□□□□ -0.9
SPAST-201ENST00000315285 BPTFQ12830 3046 aa9.44□□□□□ -0.9
SPAST-201ENST00000315285 HTTP42858 3142 aa9.43□□□□□ -0.9
SPAST-201ENST00000315285 IGHV6-1A0A0B4J1U7 121 aa9.43□□□□□ -0.9
SPAST-201ENST00000315285 CHD9Q3L8U1 2897 aa9.43□□□□□ -0.9
SPAST-201ENST00000315285 H3BNG1 76 aa9.42□□□□□ -0.9
SPAST-201ENST00000315285 HCG22E2RYF7 251 aa9.42□□□□□ -0.9
SPAST-201ENST00000315285 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
SPAST-201ENST00000315285 CRYGAP11844 174 aa9.42□□□□□ -0.9
SPAST-201ENST00000315285 SMCR5Q8TEV8 140 aa9.42□□□□□ -0.9
SPAST-201ENST00000315285 ELOF1P60002 83 aaKnown RBP9.41□□□□□ -0.9
SPAST-201ENST00000315285 LINC00167Q96N53 147 aa9.41□□□□□ -0.9
SPAST-201ENST00000315285 IGLV5-52A0A0A0MRZ9 124 aa9.41□□□□□ -0.9
SPAST-201ENST00000315285 TRBV7-6A0A0J9YX20 115 aa9.41□□□□□ -0.9
SPAST-201ENST00000315285 Q8NAQ8 132 aa9.4□□□□□ -0.9
SPAST-201ENST00000315285 Q6ZQT0 140 aa9.39□□□□□ -0.91
SPAST-201ENST00000315285 H0Y9P7 68 aa9.39□□□□□ -0.91
SPAST-201ENST00000315285 EIF4EBP3O60516 100 aaPredicted RBP9.37□□□□□ -0.91
SPAST-201ENST00000315285 PCOTHQ58A44 107 aa9.37□□□□□ -0.91
SPAST-201ENST00000315285 RANBP2P49792 3224 aaKnown RBP9.37□□□□□ -0.91
SPAST-201ENST00000315285 LOC110117498A0A087WWA1 95 aa9.37□□□□□ -0.91
SPAST-201ENST00000315285 SMIM29Q86T20 159 aa9.36□□□□□ -0.91
SPAST-201ENST00000315285 BCE1O60756 84 aa9.36□□□□□ -0.91
SPAST-201ENST00000315285 F8P00451 2351 aa9.36□□□□□ -0.91
SPAST-201ENST00000315285 C1orf195Q5TG92 126 aa9.35□□□□□ -0.91
SPAST-201ENST00000315285 CSNK1G2-AS1Q8NCQ2 148 aa9.35□□□□□ -0.91
SPAST-201ENST00000315285 GVQW2A0A096LPI5 108 aaPredicted RBP9.33□□□□□ -0.92
SPAST-201ENST00000315285 K7ERS5 55 aa9.33□□□□□ -0.92
SPAST-201ENST00000315285 Q6ZRX8 168 aa9.33□□□□□ -0.92
SPAST-201ENST00000315285 A0A096LNT2 108 aa9.33□□□□□ -0.92
SPAST-201ENST00000315285 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
SPAST-201ENST00000315285 FLNBO75369 2602 aaKnown RBP9.32□□□□□ -0.92
SPAST-201ENST00000315285 A0A1B0GW54 56 aa9.32□□□□□ -0.92
SPAST-201ENST00000315285 PSPHP1O15172 72 aa9.32□□□□□ -0.92
SPAST-201ENST00000315285 hDV103S1A0JD37 113 aa9.32□□□□□ -0.92
SPAST-201ENST00000315285 A0A0C4DFX4 3053 aa9.31□□□□□ -0.92
SPAST-201ENST00000315285 Q8NBF4 154 aa9.31□□□□□ -0.92
SPAST-201ENST00000315285 IGLV6-57P01721 117 aa9.3□□□□□ -0.92
SPAST-201ENST00000315285 HECTD1Q9ULT8 2610 aa9.3□□□□□ -0.92
SPAST-201ENST00000315285 KRTAP24-1Q3LI83 254 aa9.29□□□□□ -0.92
SPAST-201ENST00000315285 VPREB1P12018 145 aa9.29□□□□□ -0.92
SPAST-201ENST00000315285 C1orf64Q8NEQ6 169 aa9.29□□□□□ -0.92
SPAST-201ENST00000315285 USP24Q9UPU5 2620 aa9.29□□□□□ -0.92
SPAST-201ENST00000315285 NHLRC4P0CG21 123 aaPredicted RBP9.28□□□□□ -0.92
SPAST-201ENST00000315285 MDFIQ99750 246 aa9.28□□□□□ -0.92
SPAST-201ENST00000315285 GIG44P09565 113 aaPredicted RBP9.28□□□□□ -0.92
SPAST-201ENST00000315285 Q6ZRP5 223 aa9.28□□□□□ -0.92
SPAST-201ENST00000315285 LINC00588Q9Y4M8 146 aa9.27□□□□□ -0.93
SPAST-201ENST00000315285 LINC00476Q8WZB0 136 aa9.27□□□□□ -0.93
SPAST-201ENST00000315285 PMAIP1Q13794 54 aa9.27□□□□□ -0.93
SPAST-201ENST00000315285 RETNLBQ9BQ08 111 aa9.27□□□□□ -0.93
SPAST-201ENST00000315285 RPS28P62857 69 aaKnown RBP9.26□□□□□ -0.93
SPAST-201ENST00000315285 ST20-AS1Q8NBB2 130 aa9.26□□□□□ -0.93
SPAST-201ENST00000315285 C19orf73Q9NVV2 129 aa9.25□□□□□ -0.93
SPAST-201ENST00000315285 TM2D3Q9BRN9 247 aa9.25□□□□□ -0.93
SPAST-201ENST00000315285 TRANK1O15050 2925 aa9.24□□□□□ -0.93
SPAST-201ENST00000315285 PHF5AQ7RTV0 110 aaKnown RBP9.23□□□□□ -0.93
SPAST-201ENST00000315285 DNAH10OSP0CZ25 163 aa9.22□□□□□ -0.93
SPAST-201ENST00000315285 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
SPAST-201ENST00000315285 ZNF575Q86XF7 245 aa9.22□□□□□ -0.93
SPAST-201ENST00000315285 MOBPQ13875 183 aa9.22□□□□□ -0.93
SPAST-201ENST00000315285 PRR34Q9NV39 138 aa9.21□□□□□ -0.94
SPAST-201ENST00000315285 LAMA3Q16787 3333 aa9.21□□□□□ -0.94
SPAST-201ENST00000315285 EPM2AB3EWF7 344 aa9.21□□□□□ -0.94
SPAST-201ENST00000315285 MKI67P46013 3256 aaKnown RBP9.2□□□□□ -0.94
SPAST-201ENST00000315285 FLNAP21333 2647 aaKnown RBP9.2□□□□□ -0.94
SPAST-201ENST00000315285 CENPEQ02224 2701 aa9.2□□□□□ -0.94
SPAST-201ENST00000315285 LINC00612Q8N6U2 182 aa9.2□□□□□ -0.94
SPAST-201ENST00000315285 CFAP54Q96N23 3096 aa9.2□□□□□ -0.94
SPAST-201ENST00000315285 TP53AIP1Q9HCN2 124 aa9.19□□□□□ -0.94
SPAST-201ENST00000315285 MGAM2Q2M2H8 2515 aa9.19□□□□□ -0.94
SPAST-201ENST00000315285 SERTAD4-AS1Q5TG53 156 aa9.18□□□□□ -0.94
SPAST-201ENST00000315285 LINC00528Q8N1L1 170 aa9.18□□□□□ -0.94
SPAST-201ENST00000315285 FAM168BA1KXE4 195 aa9.18□□□□□ -0.94
SPAST-201ENST00000315285 LIMD2Q9BT23 127 aa9.18□□□□□ -0.94
SPAST-201ENST00000315285 LAMA2P24043 3122 aaKnown RBP9.17□□□□□ -0.94
SPAST-201ENST00000315285 C4orf26Q17RF5 130 aa9.17□□□□□ -0.94
SPAST-201ENST00000315285 KCNQ1DNQ9H478 68 aa9.17□□□□□ -0.94
SPAST-201ENST00000315285 TRBV7-4A0A0J9YYF1 115 aa9.17□□□□□ -0.94
SPAST-201ENST00000315285 NBDYA0A0U1RRE5 68 aa9.17□□□□□ -0.94
SPAST-201ENST00000315285 CHTF8P0CG12 524 aa9.16□□□□□ -0.94
SPAST-201ENST00000315285 PRO0628Q9UI54 55 aa9.16□□□□□ -0.94
SPAST-201ENST00000315285 SPINK1P00995 79 aa9.16□□□□□ -0.94
SPAST-201ENST00000315285 IGLV1-50A0A075B6I6 118 aa9.14□□□□□ -0.95
SPAST-201ENST00000315285 KRTAP10-3P60369 221 aa9.14□□□□□ -0.95
SPAST-201ENST00000315285 RPL37AP61513 92 aaKnown RBP9.14□□□□□ -0.95
SPAST-201ENST00000315285 C15orf56Q8N910 161 aa9.14□□□□□ -0.95
SPAST-201ENST00000315285 H3BPC8 53 aa9.14□□□□□ -0.95
SPAST-201ENST00000315285 ITPR3Q14573 2671 aa9.13□□□□□ -0.95
SPAST-201ENST00000315285 BRCA2P51587 3418 aa9.13□□□□□ -0.95
SPAST-201ENST00000315285 TRAV22A0A0B4J277 110 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms