RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 IGHV3OR16-9A0A0B4J2B5 98 aa9.97□□□□□ -0.81
CDT1-201ENST00000301019 IBA57-AS1B1ANH7 110 aa9.97□□□□□ -0.81
CDT1-201ENST00000301019 DEFB130BP0DP73 79 aa9.96□□□□□ -0.81
CDT1-201ENST00000301019 DEFB130AP0DP74 79 aa9.96□□□□□ -0.81
CDT1-201ENST00000301019 KRTAP10-9P60411 292 aa9.96□□□□□ -0.81
CDT1-201ENST00000301019 LINC01006Q8NI28 216 aa9.96□□□□□ -0.82
CDT1-201ENST00000301019 MAP6D1Q9H9H5 199 aa9.96□□□□□ -0.82
CDT1-201ENST00000301019 IGHV4-30-2A0A087WSY4 118 aa9.95□□□□□ -0.82
CDT1-201ENST00000301019 C3orf84H3BNL1 204 aa9.95□□□□□ -0.82
CDT1-201ENST00000301019 DEFB112Q30KQ8 113 aa9.95□□□□□ -0.82
CDT1-201ENST00000301019 EPM2AB3EWF7 344 aa9.94□□□□□ -0.82
CDT1-201ENST00000301019 STHQ8IWL8 128 aa9.94□□□□□ -0.82
CDT1-201ENST00000301019 ACANP16112 2415 aa9.94□□□□□ -0.82
CDT1-201ENST00000301019 TMEM89A2RUT3 159 aa9.94□□□□□ -0.82
CDT1-201ENST00000301019 C1orf158Q8N1D5 194 aa9.94□□□□□ -0.82
CDT1-201ENST00000301019 FUSP35637 526 aaKnown RBP eCLIP9.93□□□□□ -0.82
CDT1-201ENST00000301019 HELZ2Q9BYK8 2649 aaKnown RBP9.93□□□□□ -0.82
CDT1-201ENST00000301019 FAM30AQ9NZY2 134 aa9.93□□□□□ -0.82
CDT1-201ENST00000301019 XAGE1AQ9HD64 81 aa9.92□□□□□ -0.82
CDT1-201ENST00000301019 DSCR9P59020 149 aa9.92□□□□□ -0.82
CDT1-201ENST00000301019 C6orf223Q8N319 242 aa9.92□□□□□ -0.82
CDT1-201ENST00000301019 H3BUA1 57 aa9.91□□□□□ -0.82
CDT1-201ENST00000301019 TRBV7-4A0A0J9YYF1 115 aa9.9□□□□□ -0.82
CDT1-201ENST00000301019 LINC00959A0A1B0GUT2 108 aa9.9□□□□□ -0.82
CDT1-201ENST00000301019 UNC79Q9P2D8 2635 aa9.9□□□□□ -0.82
CDT1-201ENST00000301019 PMAIP1Q13794 54 aa9.89□□□□□ -0.83
CDT1-201ENST00000301019 ESRGQ1W209 222 aa9.89□□□□□ -0.83
CDT1-201ENST00000301019 C10orf25Q5T742 122 aa9.88□□□□□ -0.83
CDT1-201ENST00000301019 DEFB113Q30KQ7 82 aa9.88□□□□□ -0.83
CDT1-201ENST00000301019 LINC00575Q6W349 94 aa9.88□□□□□ -0.83
CDT1-201ENST00000301019 DEFB105AQ8NG35 78 aa9.88□□□□□ -0.83
CDT1-201ENST00000301019 KLK12Q9UKR0 248 aa9.87□□□□□ -0.83
CDT1-201ENST00000301019 PRYO14603 147 aa9.87□□□□□ -0.83
CDT1-201ENST00000301019 MUC7Q8TAX7 377 aa9.87□□□□□ -0.83
CDT1-201ENST00000301019 TRBV10-3A0A0K0K1G6 114 aa9.86□□□□□ -0.83
CDT1-201ENST00000301019 B4DSR2 109 aa9.86□□□□□ -0.83
CDT1-201ENST00000301019 LINC01356Q8N9X3 169 aa9.86□□□□□ -0.83
CDT1-201ENST00000301019 TRBV6-8A0A0A6YYG3 113 aa9.86□□□□□ -0.83
CDT1-201ENST00000301019 MSMBP08118 114 aa9.86□□□□□ -0.83
CDT1-201ENST00000301019 ZNF561-AS1K7EIQ3 104 aa9.86□□□□□ -0.83
CDT1-201ENST00000301019 LY6G6DO95868 133 aa9.86□□□□□ -0.83
CDT1-201ENST00000301019 ODF3L2Q3SX64 289 aa9.85□□□□□ -0.83
CDT1-201ENST00000301019 CD164L2Q6UWJ8 174 aa9.85□□□□□ -0.83
CDT1-201ENST00000301019 UNQ6190/PRO20217Q6UXQ8 127 aa9.84□□□□□ -0.83
CDT1-201ENST00000301019 DEFB4AO15263 64 aa9.82□□□□□ -0.84
CDT1-201ENST00000301019 BAHCC1Q9P281 2608 aa9.82□□□□□ -0.84
CDT1-201ENST00000301019 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
CDT1-201ENST00000301019 FAM19A3Q7Z5A8 133 aa9.82□□□□□ -0.84
CDT1-201ENST00000301019 ANGP03950 147 aaKnown RBP9.81□□□□□ -0.84
CDT1-201ENST00000301019 DEFB116Q30KQ4 102 aa9.81□□□□□ -0.84
CDT1-201ENST00000301019 GYPEP15421 78 aa9.8□□□□□ -0.84
CDT1-201ENST00000301019 PDZD2O15018 2839 aa9.8□□□□□ -0.84
CDT1-201ENST00000301019 KRTAP1-3Q8IUG1 177 aa9.8□□□□□ -0.84
CDT1-201ENST00000301019 LINC00167Q96N53 147 aa9.8□□□□□ -0.84
CDT1-201ENST00000301019 NDUFC1O43677 76 aa9.79□□□□□ -0.84
CDT1-201ENST00000301019 DEFB114Q30KQ6 69 aa9.78□□□□□ -0.84
CDT1-201ENST00000301019 Q6ZRP5 223 aa9.78□□□□□ -0.84
CDT1-201ENST00000301019 SMIM29Q86T20 159 aa9.78□□□□□ -0.84
CDT1-201ENST00000301019 A8MUN3 132 aa9.78□□□□□ -0.84
CDT1-201ENST00000301019 Q6ZTC4 211 aa9.78□□□□□ -0.84
CDT1-201ENST00000301019 C1orf64Q8NEQ6 169 aa9.77□□□□□ -0.84
CDT1-201ENST00000301019 FASNP49327 2511 aaKnown RBP9.77□□□□□ -0.85
CDT1-201ENST00000301019 IGHV4-31P0DP07 118 aa9.77□□□□□ -0.85
CDT1-201ENST00000301019 CXCL6P80162 114 aa9.77□□□□□ -0.85
CDT1-201ENST00000301019 CHCHD10Q8WYQ3 142 aaPredicted RBP9.76□□□□□ -0.85
CDT1-201ENST00000301019 ZNF469Q96JG9 3925 aaPredicted RBP9.75□□□□□ -0.85
CDT1-201ENST00000301019 LINC00612Q8N6U2 182 aa9.75□□□□□ -0.85
CDT1-201ENST00000301019 LOC110117498A0A087WWA1 95 aa9.75□□□□□ -0.85
CDT1-201ENST00000301019 HECTD1Q9ULT8 2610 aa9.74□□□□□ -0.85
CDT1-201ENST00000301019 ITPR2Q14571 2701 aa9.74□□□□□ -0.85
CDT1-201ENST00000301019 Q8IZM0 81 aa9.74□□□□□ -0.85
CDT1-201ENST00000301019 PLAC8L1A1L4L8 177 aa9.73□□□□□ -0.85
CDT1-201ENST00000301019 IGKV4-1P06312 121 aa9.73□□□□□ -0.85
CDT1-201ENST00000301019 HTN3P15516 51 aa9.73□□□□□ -0.85
CDT1-201ENST00000301019 NOTCH2Q04721 2471 aa9.71□□□□□ -0.85
CDT1-201ENST00000301019 TRAV22A0A0B4J277 110 aa9.71□□□□□ -0.85
CDT1-201ENST00000301019 OCR1Q9BZK8 76 aa9.71□□□□□ -0.85
CDT1-201ENST00000301019 ITPR3Q14573 2671 aa9.71□□□□□ -0.85
CDT1-201ENST00000301019 ZNF702PQ9H963 129 aa9.71□□□□□ -0.86
CDT1-201ENST00000301019 CYSRT1A8MQ03 144 aa9.71□□□□□ -0.86
CDT1-201ENST00000301019 SPAG11BQ08648 103 aa9.71□□□□□ -0.86
CDT1-201ENST00000301019 KIAA0087Q14695 138 aa9.71□□□□□ -0.86
CDT1-201ENST00000301019 DIRC1Q969H9 104 aa9.71□□□□□ -0.86
CDT1-201ENST00000301019 HIGD2BQ4VC39 106 aa9.7□□□□□ -0.86
CDT1-201ENST00000301019 A0A0G2JQZ4 141 aa9.69□□□□□ -0.86
CDT1-201ENST00000301019 A0A1W2PNN7 141 aa9.69□□□□□ -0.86
CDT1-201ENST00000301019 ATP5EP56381 51 aaPredicted RBP9.69□□□□□ -0.86
CDT1-201ENST00000301019 VWFP04275 2813 aa9.69□□□□□ -0.86
CDT1-201ENST00000301019 PKD1L1Q8TDX9 2849 aa9.69□□□□□ -0.86
CDT1-201ENST00000301019 hDV103S1A0JD37 113 aa9.68□□□□□ -0.86
CDT1-201ENST00000301019 ZNF73O43830 326 aaPredicted RBP9.68□□□□□ -0.86
CDT1-201ENST00000301019 FSHBP01225 129 aa9.68□□□□□ -0.86
CDT1-201ENST00000301019 GIG44P09565 113 aaPredicted RBP9.68□□□□□ -0.86
CDT1-201ENST00000301019 REG3AQ06141 175 aa9.68□□□□□ -0.86
CDT1-201ENST00000301019 HIVEP1P15822 2718 aa9.67□□□□□ -0.86
CDT1-201ENST00000301019 COX7BP24311 80 aa9.67□□□□□ -0.86
CDT1-201ENST00000301019 FLNAP21333 2647 aaKnown RBP9.66□□□□□ -0.86
CDT1-201ENST00000301019 ST20-AS1Q8NBB2 130 aa9.66□□□□□ -0.86
CDT1-201ENST00000301019 CHKB-CPT1BH3BT56 60 aa9.65□□□□□ -0.86
CDT1-201ENST00000301019 BCE1O60756 84 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms