RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 LINC01006Q8NI28 216 aa8.88□□□□□ -0.99
TVP23A-201ENST00000299866 ABCA12Q86UK0 2595 aa8.88□□□□□ -0.99
TVP23A-201ENST00000299866 CACNA1AO00555 2505 aa8.88□□□□□ -0.99
TVP23A-201ENST00000299866 CFAP46Q8IYW2 2715 aa8.88□□□□□ -0.99
TVP23A-201ENST00000299866 A0A1B0GUV1 79 aa8.87□□□□□ -0.99
TVP23A-201ENST00000299866 CD164L2Q6UWJ8 174 aa8.87□□□□□ -0.99
TVP23A-201ENST00000299866 C16orf95Q9H693 158 aa8.87□□□□□ -0.99
TVP23A-201ENST00000299866 MUC7Q8TAX7 377 aa8.87□□□□□ -0.99
TVP23A-201ENST00000299866 BBC3Q96PG8 261 aaPredicted RBP8.87□□□□□ -0.99
TVP23A-201ENST00000299866 ESM1Q9NQ30 184 aa8.87□□□□□ -0.99
TVP23A-201ENST00000299866 MIFP14174 115 aa8.86□□□□□ -0.99
TVP23A-201ENST00000299866 CXCL6P80162 114 aa8.86□□□□□ -0.99
TVP23A-201ENST00000299866 Q8N9L7 120 aa8.85□□□□□ -0.99
TVP23A-201ENST00000299866 CCDC168Q8NDH2 2452 aa8.85□□□□□ -0.99
TVP23A-201ENST00000299866 REG3AQ06141 175 aa8.84□□□□□ -0.99
TVP23A-201ENST00000299866 BRK1Q8WUW1 75 aa8.84□□□□□ -0.99
TVP23A-201ENST00000299866 PKD1L2Q7Z442 2459 aa8.84□□□□□ -0.99
TVP23A-201ENST00000299866 NREPQ16612 68 aa8.84□□□□□ -0.99
TVP23A-201ENST00000299866 MPLKIPQ8TAP9 179 aa8.84□□□□□ -0.99
TVP23A-201ENST00000299866 SPAG11BQ08648 103 aa8.83□□□□□ -1
TVP23A-201ENST00000299866 C19orf73Q9NVV2 129 aa8.83□□□□□ -1
TVP23A-201ENST00000299866 GCN1Q92616 2671 aaKnown RBP8.83□□□□□ -1
TVP23A-201ENST00000299866 IGHV4-28A0A0C4DH34 117 aa8.83□□□□□ -1
TVP23A-201ENST00000299866 A0A0U1RQV1 116 aa8.83□□□□□ -1
TVP23A-201ENST00000299866 XAGE1AQ9HD64 81 aa8.83□□□□□ -1
TVP23A-201ENST00000299866 APCP25054 2843 aa8.83□□□□□ -1
TVP23A-201ENST00000299866 PDE6GP18545 87 aa8.82□□□□□ -1
TVP23A-201ENST00000299866 TRBV7-4A0A0J9YYF1 115 aa8.82□□□□□ -1
TVP23A-201ENST00000299866 CMC4P56277 68 aaPredicted RBP8.82□□□□□ -1
TVP23A-201ENST00000299866 BPY2O14599 106 aa8.82□□□□□ -1
TVP23A-201ENST00000299866 C9orf66Q5T8R8 295 aa8.81□□□□□ -1
TVP23A-201ENST00000299866 TMEM254Q8TBM7 123 aa8.81□□□□□ -1
TVP23A-201ENST00000299866 PRO0255Q9UI72 69 aa8.81□□□□□ -1
TVP23A-201ENST00000299866 CYSRT1A8MQ03 144 aa8.81□□□□□ -1
TVP23A-201ENST00000299866 IGLV6-57P01721 117 aa8.81□□□□□ -1
TVP23A-201ENST00000299866 NDUFC1O43677 76 aa8.81□□□□□ -1
TVP23A-201ENST00000299866 DEFB4AO15263 64 aa8.8□□□□□ -1
TVP23A-201ENST00000299866 DIRC1Q969H9 104 aa8.8□□□□□ -1
TVP23A-201ENST00000299866 DAD1P61803 113 aa8.79□□□□□ -1
TVP23A-201ENST00000299866 FAM229BQ4G0N7 80 aa8.79□□□□□ -1
TVP23A-201ENST00000299866 DNAJC9-AS1A6NH13 148 aa8.79□□□□□ -1
TVP23A-201ENST00000299866 IGLV1-51P01701 117 aa8.78□□□□□ -1
TVP23A-201ENST00000299866 KRTAP10-9P60411 292 aa8.78□□□□□ -1
TVP23A-201ENST00000299866 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.78□□□□□ -1
TVP23A-201ENST00000299866 COX7BP24311 80 aa8.78□□□□□ -1
TVP23A-201ENST00000299866 ZNF73O43830 326 aaPredicted RBP8.76□□□□□ -1.01
TVP23A-201ENST00000299866 ATP5EP56381 51 aaPredicted RBP8.75□□□□□ -1.01
TVP23A-201ENST00000299866 KLK12Q9UKR0 248 aa8.74□□□□□ -1.01
TVP23A-201ENST00000299866 MTORP42345 2549 aa8.74□□□□□ -1.01
TVP23A-201ENST00000299866 H3BQ85 93 aa8.73□□□□□ -1.01
TVP23A-201ENST00000299866 C3orf84H3BNL1 204 aa8.73□□□□□ -1.01
TVP23A-201ENST00000299866 PRYO14603 147 aa8.73□□□□□ -1.01
TVP23A-201ENST00000299866 LINC00612Q8N6U2 182 aa8.73□□□□□ -1.01
TVP23A-201ENST00000299866 A0A0J9YWU9 116 aa8.73□□□□□ -1.01
TVP23A-201ENST00000299866 IGHV4-30-4P0DP06 118 aa8.73□□□□□ -1.01
TVP23A-201ENST00000299866 HTN3P15516 51 aa8.73□□□□□ -1.01
TVP23A-201ENST00000299866 FUSP35637 526 aaKnown RBP eCLIP8.73□□□□□ -1.01
TVP23A-201ENST00000299866 HIGD2AQ9BW72 106 aa8.73□□□□□ -1.01
TVP23A-201ENST00000299866 C6orf48Q9UBA6 75 aa8.72□□□□□ -1.01
TVP23A-201ENST00000299866 X6R8D5 127 aa8.72□□□□□ -1.01
TVP23A-201ENST00000299866 IGKV4-1P06312 121 aa8.72□□□□□ -1.01
TVP23A-201ENST00000299866 ELOF1P60002 83 aaKnown RBP8.7□□□□□ -1.02
TVP23A-201ENST00000299866 LRCOL1A6NCL2 159 aa8.7□□□□□ -1.02
TVP23A-201ENST00000299866 IGSF10Q6WRI0 2623 aa8.7□□□□□ -1.02
TVP23A-201ENST00000299866 HIGD2BQ4VC39 106 aa8.7□□□□□ -1.02
TVP23A-201ENST00000299866 C1orf195Q5TG92 126 aa8.7□□□□□ -1.02
TVP23A-201ENST00000299866 CELA1Q9UNI1 258 aa8.7□□□□□ -1.02
TVP23A-201ENST00000299866 DEFB105AQ8NG35 78 aa8.69□□□□□ -1.02
TVP23A-201ENST00000299866 OCR1Q9BZK8 76 aa8.69□□□□□ -1.02
TVP23A-201ENST00000299866 DEFB113Q30KQ7 82 aa8.69□□□□□ -1.02
TVP23A-201ENST00000299866 PIEZO1Q92508 2521 aa8.69□□□□□ -1.02
TVP23A-201ENST00000299866 ESRGQ1W209 222 aa8.69□□□□□ -1.02
TVP23A-201ENST00000299866 ACANP16112 2415 aa8.68□□□□□ -1.02
TVP23A-201ENST00000299866 FAM30AQ9NZY2 134 aa8.68□□□□□ -1.02
TVP23A-201ENST00000299866 ZNF469Q96JG9 3925 aaPredicted RBP8.68□□□□□ -1.02
TVP23A-201ENST00000299866 ERC2-IT1O76042 136 aa8.67□□□□□ -1.02
TVP23A-201ENST00000299866 DEFB135Q30KP9 77 aa8.67□□□□□ -1.02
TVP23A-201ENST00000299866 ZNF462Q96JM2 2506 aa8.67□□□□□ -1.02
TVP23A-201ENST00000299866 ITPR3Q14573 2671 aa8.66□□□□□ -1.02
TVP23A-201ENST00000299866 Q6ZTC4 211 aa8.66□□□□□ -1.02
TVP23A-201ENST00000299866 HIVEP2P31629 2446 aa8.65□□□□□ -1.02
TVP23A-201ENST00000299866 VPREB1P12018 145 aa8.65□□□□□ -1.02
TVP23A-201ENST00000299866 CAMK2N2Q96S95 79 aa8.65□□□□□ -1.02
TVP23A-201ENST00000299866 FLNAP21333 2647 aaKnown RBP8.64□□□□□ -1.03
TVP23A-201ENST00000299866 LYRM9A8MSI8 78 aa8.64□□□□□ -1.03
TVP23A-201ENST00000299866 LINC00528Q8N1L1 170 aa8.64□□□□□ -1.03
TVP23A-201ENST00000299866 SMIM29Q86T20 159 aa8.63□□□□□ -1.03
TVP23A-201ENST00000299866 V9GYY9 64 aa8.63□□□□□ -1.03
TVP23A-201ENST00000299866 GVQW2A0A096LPI5 108 aaPredicted RBP8.63□□□□□ -1.03
TVP23A-201ENST00000299866 M0R378 163 aa8.63□□□□□ -1.03
TVP23A-201ENST00000299866 LELP1Q5T871 98 aa8.62□□□□□ -1.03
TVP23A-201ENST00000299866 F8WDY8 70 aa8.61□□□□□ -1.03
TVP23A-201ENST00000299866 PRR34Q9NV39 138 aa8.61□□□□□ -1.03
TVP23A-201ENST00000299866 Q6ZRU5 148 aa8.6□□□□□ -1.03
TVP23A-201ENST00000299866 PRB2P02812 416 aaPredicted RBP8.59□□□□□ -1.03
TVP23A-201ENST00000299866 PRR4Q16378 134 aa8.59□□□□□ -1.03
TVP23A-201ENST00000299866 KRTAP1-3Q8IUG1 177 aa8.58□□□□□ -1.04
TVP23A-201ENST00000299866 SEC61GP60059 68 aa8.56□□□□□ -1.04
TVP23A-201ENST00000299866 KPRPQ5T749 579 aaPredicted RBP8.56□□□□□ -1.04
TVP23A-201ENST00000299866 Q8N377 158 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms