RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 SPTSSBQ8NFR3 76 aa11□□□□□ -0.65
USP43-201ENST00000285199 Q6ZVQ6 151 aa11□□□□□ -0.65
USP43-201ENST00000285199 SMR3AQ99954 134 aa11□□□□□ -0.65
USP43-201ENST00000285199 MIFP14174 115 aa10.99□□□□□ -0.65
USP43-201ENST00000285199 WFDC10BQ8IUB3 73 aa10.99□□□□□ -0.65
USP43-201ENST00000285199 WFDC13Q8IUB5 93 aa10.99□□□□□ -0.65
USP43-201ENST00000285199 NOTCH1P46531 2555 aa10.99□□□□□ -0.65
USP43-201ENST00000285199 FAM19A3Q7Z5A8 133 aa10.98□□□□□ -0.65
USP43-201ENST00000285199 TEX15Q9BXT5 2789 aa10.98□□□□□ -0.65
USP43-201ENST00000285199 CDK2AP2O75956 126 aa10.98□□□□□ -0.65
USP43-201ENST00000285199 TRAV7A0A075B6U4 112 aa10.98□□□□□ -0.65
USP43-201ENST00000285199 IGLV5-45A0A087WSX0 123 aa10.98□□□□□ -0.65
USP43-201ENST00000285199 CRYGAP11844 174 aa10.98□□□□□ -0.65
USP43-201ENST00000285199 BRI3O95415 125 aa10.97□□□□□ -0.65
USP43-201ENST00000285199 MP68P56378 58 aa10.97□□□□□ -0.65
USP43-201ENST00000285199 LINC01547P58512 204 aaPredicted RBP10.97□□□□□ -0.65
USP43-201ENST00000285199 UBR5O95071 2799 aaPredicted RBP10.97□□□□□ -0.65
USP43-201ENST00000285199 ZANQ9Y493 2812 aa10.96□□□□□ -0.65
USP43-201ENST00000285199 RELNP78509 3460 aa10.96□□□□□ -0.66
USP43-201ENST00000285199 DMDP11532 3685 aa10.95□□□□□ -0.66
USP43-201ENST00000285199 C10orf25Q5T742 122 aa10.94□□□□□ -0.66
USP43-201ENST00000285199 LYRM9A8MSI8 78 aa10.94□□□□□ -0.66
USP43-201ENST00000285199 DEFB116Q30KQ4 102 aa10.94□□□□□ -0.66
USP43-201ENST00000285199 H0Y9J4 135 aa10.93□□□□□ -0.66
USP43-201ENST00000285199 SMIM26A0A096LP01 95 aa10.93□□□□□ -0.66
USP43-201ENST00000285199 LINC00575Q6W349 94 aa10.93□□□□□ -0.66
USP43-201ENST00000285199 NBEAL1Q6ZS30 2694 aa10.92□□□□□ -0.66
USP43-201ENST00000285199 J3QKU1 62 aa10.92□□□□□ -0.66
USP43-201ENST00000285199 LINC01561Q8N1V8 128 aa10.92□□□□□ -0.66
USP43-201ENST00000285199 TEP1Q99973 2627 aaKnown RBP10.92□□□□□ -0.66
USP43-201ENST00000285199 SYCNQ0VAF6 134 aa10.92□□□□□ -0.66
USP43-201ENST00000285199 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.92□□□□□ -0.66
USP43-201ENST00000285199 TRAV10A0A0B4J240 114 aa10.91□□□□□ -0.66
USP43-201ENST00000285199 IGLV1-51P01701 117 aa10.91□□□□□ -0.66
USP43-201ENST00000285199 MUC7Q8TAX7 377 aa10.91□□□□□ -0.66
USP43-201ENST00000285199 KPRPQ5T749 579 aaPredicted RBP10.9□□□□□ -0.66
USP43-201ENST00000285199 SERP1Q9Y6X1 66 aa10.9□□□□□ -0.66
USP43-201ENST00000285199 COX17Q14061 63 aa10.89□□□□□ -0.67
USP43-201ENST00000285199 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.88□□□□□ -0.67
USP43-201ENST00000285199 INAFM1C9JVW0 142 aa10.88□□□□□ -0.67
USP43-201ENST00000285199 PSPHP1O15172 72 aa10.88□□□□□ -0.67
USP43-201ENST00000285199 RETNQ9HD89 108 aa10.88□□□□□ -0.67
USP43-201ENST00000285199 TMEM254Q8TBM7 123 aa10.88□□□□□ -0.67
USP43-201ENST00000285199 M0R378 163 aa10.87□□□□□ -0.67
USP43-201ENST00000285199 LELP1Q5T871 98 aa10.87□□□□□ -0.67
USP43-201ENST00000285199 H3BQ85 93 aa10.87□□□□□ -0.67
USP43-201ENST00000285199 CUBNO60494 3623 aa10.87□□□□□ -0.67
USP43-201ENST00000285199 CSMD1Q96PZ7 3565 aa10.87□□□□□ -0.67
USP43-201ENST00000285199 COL6A5A8TX70 2615 aa10.86□□□□□ -0.67
USP43-201ENST00000285199 DEFB131BA0A096LNP1 70 aa10.86□□□□□ -0.67
USP43-201ENST00000285199 UTP20O75691 2785 aaKnown RBP10.86□□□□□ -0.67
USP43-201ENST00000285199 TM2D3Q9BRN9 247 aa10.85□□□□□ -0.67
USP43-201ENST00000285199 TRBV7-6A0A0J9YX20 115 aa10.85□□□□□ -0.67
USP43-201ENST00000285199 OXLD1Q5BKU9 147 aa10.85□□□□□ -0.67
USP43-201ENST00000285199 SPATA3Q8NHX4 192 aa10.85□□□□□ -0.67
USP43-201ENST00000285199 C1orf195Q5TG92 126 aa10.84□□□□□ -0.67
USP43-201ENST00000285199 KLK9Q2XQG4 91 aa10.84□□□□□ -0.67
USP43-201ENST00000285199 NDUFC1O43677 76 aa10.84□□□□□ -0.67
USP43-201ENST00000285199 C11orf45Q8TAV5 145 aa10.83□□□□□ -0.68
USP43-201ENST00000285199 UBE2AP49459 152 aa10.82□□□□□ -0.68
USP43-201ENST00000285199 V9GYY9 64 aa10.82□□□□□ -0.68
USP43-201ENST00000285199 A0A1B0GUV1 79 aa10.82□□□□□ -0.68
USP43-201ENST00000285199 CELSR2Q9HCU4 2923 aa10.81□□□□□ -0.68
USP43-201ENST00000285199 PRYO14603 147 aa10.8□□□□□ -0.68
USP43-201ENST00000285199 Q6ZRU5 148 aa10.8□□□□□ -0.68
USP43-201ENST00000285199 NF1P21359 2839 aa10.8□□□□□ -0.68
USP43-201ENST00000285199 C1orf137Q5JT78 98 aa10.8□□□□□ -0.68
USP43-201ENST00000285199 SMG1Q96Q15 3661 aaKnown RBP10.8□□□□□ -0.68
USP43-201ENST00000285199 FAM104AQ969W3 186 aa10.8□□□□□ -0.68
USP43-201ENST00000285199 CR1P17927 2039 aa10.79□□□□□ -0.68
USP43-201ENST00000285199 IGHV4-30-4P0DP06 118 aa10.79□□□□□ -0.68
USP43-201ENST00000285199 HELZ2Q9BYK8 2649 aaKnown RBP10.79□□□□□ -0.68
USP43-201ENST00000285199 LINC00208Q96KT6 92 aa10.79□□□□□ -0.68
USP43-201ENST00000285199 FBN2P35556 2912 aa10.78□□□□□ -0.68
USP43-201ENST00000285199 NDUFB1O75438 58 aa10.78□□□□□ -0.68
USP43-201ENST00000285199 LINC00474Q9P2X8 69 aa10.78□□□□□ -0.68
USP43-201ENST00000285199 Q6ZTC4 211 aa10.77□□□□□ -0.68
USP43-201ENST00000285199 RPS28P62857 69 aaKnown RBP10.77□□□□□ -0.69
USP43-201ENST00000285199 Q6ZQT0 140 aa10.77□□□□□ -0.69
USP43-201ENST00000285199 SETXQ7Z333 2677 aaKnown RBP10.76□□□□□ -0.69
USP43-201ENST00000285199 IGKV4-1P06312 121 aa10.76□□□□□ -0.69
USP43-201ENST00000285199 CYSTM1Q9H1C7 97 aa10.75□□□□□ -0.69
USP43-201ENST00000285199 M0R2N4 97 aa10.75□□□□□ -0.69
USP43-201ENST00000285199 C6orf48Q9UBA6 75 aa10.74□□□□□ -0.69
USP43-201ENST00000285199 CRYBG3Q68DQ2 2970 aa10.74□□□□□ -0.69
USP43-201ENST00000285199 CHKB-CPT1BH3BT56 60 aa10.74□□□□□ -0.69
USP43-201ENST00000285199 EGFEM1PQ0D2K5 195 aa10.73□□□□□ -0.69
USP43-201ENST00000285199 SMIM29Q86T20 159 aa10.73□□□□□ -0.69
USP43-201ENST00000285199 BAHCC1Q9P281 2608 aa10.73□□□□□ -0.69
USP43-201ENST00000285199 KIAA0087Q14695 138 aa10.72□□□□□ -0.69
USP43-201ENST00000285199 LY6G6DO95868 133 aa10.71□□□□□ -0.69
USP43-201ENST00000285199 IGSF10Q6WRI0 2623 aa10.71□□□□□ -0.7
USP43-201ENST00000285199 LYPD5Q6UWN5 251 aa10.71□□□□□ -0.7
USP43-201ENST00000285199 A0A087WSZ3 146 aa10.7□□□□□ -0.7
USP43-201ENST00000285199 C2orf48Q96LS8 159 aa10.7□□□□□ -0.7
USP43-201ENST00000285199 PRO0628Q9UI54 55 aa10.7□□□□□ -0.7
USP43-201ENST00000285199 A6NED7 52 aa10.7□□□□□ -0.7
USP43-201ENST00000285199 ATP5EP56381 51 aaPredicted RBP10.7□□□□□ -0.7
USP43-201ENST00000285199 SVEP1Q4LDE5 3571 aa10.7□□□□□ -0.7
USP43-201ENST00000285199 LINC00336Q6ZUF6 198 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms