RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 PCNX3Q9H6A9 2034 aa5.97□□□□□ -1.45
SCUBE3-201ENST00000274938 FHL3Q13643 280 aa5.96□□□□□ -1.45
SCUBE3-201ENST00000274938 AGRNO00468 2067 aa5.96□□□□□ -1.45
SCUBE3-201ENST00000274938 KLKP1Q107X0 134 aa5.96□□□□□ -1.46
SCUBE3-201ENST00000274938 SSBP3-AS1Q7Z2R9 100 aa5.96□□□□□ -1.46
SCUBE3-201ENST00000274938 COL4A4P53420 1690 aaPredicted RBP5.95□□□□□ -1.46
SCUBE3-201ENST00000274938 MRPL34Q9BQ48 92 aaKnown RBP5.95□□□□□ -1.46
SCUBE3-201ENST00000274938 LITAFQ99732 161 aa5.95□□□□□ -1.46
SCUBE3-201ENST00000274938 TTC28Q96AY4 2481 aa5.95□□□□□ -1.46
SCUBE3-201ENST00000274938 EPM2AB3EWF7 344 aa5.95□□□□□ -1.46
SCUBE3-201ENST00000274938 CRIPTQ9P021 101 aa5.94□□□□□ -1.46
SCUBE3-201ENST00000274938 C16orf90A8MZG2 172 aa5.94□□□□□ -1.46
SCUBE3-201ENST00000274938 LCA10Q71F78 164 aa5.93□□□□□ -1.46
SCUBE3-201ENST00000274938 SMR3AQ99954 134 aa5.93□□□□□ -1.46
SCUBE3-201ENST00000274938 IGLV6-57P01721 117 aa5.93□□□□□ -1.46
SCUBE3-201ENST00000274938 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
SCUBE3-201ENST00000274938 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
SCUBE3-201ENST00000274938 ST20-AS1Q8NBB2 130 aa5.92□□□□□ -1.46
SCUBE3-201ENST00000274938 RPL37AP61513 92 aaKnown RBP5.92□□□□□ -1.46
SCUBE3-201ENST00000274938 Q6ZRP5 223 aa5.92□□□□□ -1.46
SCUBE3-201ENST00000274938 BDP1A6H8Y1 2624 aa5.92□□□□□ -1.46
SCUBE3-201ENST00000274938 PRO3102Q9H379 93 aa5.92□□□□□ -1.46
SCUBE3-201ENST00000274938 K7EQZ3 153 aa5.91□□□□□ -1.46
SCUBE3-201ENST00000274938 KRTAP10-9P60411 292 aa5.91□□□□□ -1.46
SCUBE3-201ENST00000274938 PHF5AQ7RTV0 110 aaKnown RBP5.91□□□□□ -1.46
SCUBE3-201ENST00000274938 ACACBO00763 2458 aa5.9□□□□□ -1.46
SCUBE3-201ENST00000274938 ATRXP46100 2492 aa5.9□□□□□ -1.46
SCUBE3-201ENST00000274938 A0A1W2PPR1 153 aa5.9□□□□□ -1.46
SCUBE3-201ENST00000274938 PRRC2AP48634 2157 aaKnown RBP5.9□□□□□ -1.47
SCUBE3-201ENST00000274938 SPG11Q96JI7 2443 aa5.89□□□□□ -1.47
SCUBE3-201ENST00000274938 TYMSOSQ8TAI1 123 aa5.89□□□□□ -1.47
SCUBE3-201ENST00000274938 Q96NJ1 140 aa5.89□□□□□ -1.47
SCUBE3-201ENST00000274938 OTOGLQ3ZCN5 2332 aa5.89□□□□□ -1.47
SCUBE3-201ENST00000274938 LINC00336Q6ZUF6 198 aa5.88□□□□□ -1.47
SCUBE3-201ENST00000274938 MUC22E2RYF6 1773 aaPredicted RBP5.88□□□□□ -1.47
SCUBE3-201ENST00000274938 PRR15Q8IV56 129 aa5.87□□□□□ -1.47
SCUBE3-201ENST00000274938 KCNQ1DNQ9H478 68 aa5.87□□□□□ -1.47
SCUBE3-201ENST00000274938 C8orf17Q9NRJ1 99 aa5.87□□□□□ -1.47
SCUBE3-201ENST00000274938 RTL8CO15255 209 aa5.87□□□□□ -1.47
SCUBE3-201ENST00000274938 KLK9Q2XQG4 91 aa5.86□□□□□ -1.47
SCUBE3-201ENST00000274938 NAV3Q8IVL0 2385 aa5.86□□□□□ -1.47
SCUBE3-201ENST00000274938 H7BZZ5 65 aa5.86□□□□□ -1.47
SCUBE3-201ENST00000274938 LINC00528Q8N1L1 170 aa5.86□□□□□ -1.47
SCUBE3-201ENST00000274938 IGLV1-50A0A075B6I6 118 aa5.86□□□□□ -1.47
SCUBE3-201ENST00000274938 C2CD3Q4AC94 2353 aa5.85□□□□□ -1.47
SCUBE3-201ENST00000274938 CSPG4Q6UVK1 2322 aa5.85□□□□□ -1.47
SCUBE3-201ENST00000274938 NBDYA0A0U1RRE5 68 aa5.84□□□□□ -1.47
SCUBE3-201ENST00000274938 SPANXA2-OT1Q8N9U9 137 aa5.84□□□□□ -1.47
SCUBE3-201ENST00000274938 CUL9Q8IWT3 2517 aa5.84□□□□□ -1.47
SCUBE3-201ENST00000274938 LRP4O75096 1905 aa5.84□□□□□ -1.47
SCUBE3-201ENST00000274938 APLNQ9ULZ1 77 aa5.83□□□□□ -1.48
SCUBE3-201ENST00000274938 A0A1B0GVX0 72 aa5.83□□□□□ -1.48
SCUBE3-201ENST00000274938 IGFL1Q6UW32 110 aa5.83□□□□□ -1.48
SCUBE3-201ENST00000274938 CDC42SE1Q9NRR8 79 aa5.83□□□□□ -1.48
SCUBE3-201ENST00000274938 NAV2Q8IVL1 2488 aa5.82□□□□□ -1.48
SCUBE3-201ENST00000274938 DNAH10OSP0CZ25 163 aa5.82□□□□□ -1.48
SCUBE3-201ENST00000274938 Q8NAQ8 132 aa5.81□□□□□ -1.48
SCUBE3-201ENST00000274938 NOTCH2Q04721 2471 aa5.81□□□□□ -1.48
SCUBE3-201ENST00000274938 LINC00588Q9Y4M8 146 aa5.81□□□□□ -1.48
SCUBE3-201ENST00000274938 CHTF8P0CG12 524 aa5.8□□□□□ -1.48
SCUBE3-201ENST00000274938 PTPN13Q12923 2485 aa5.8□□□□□ -1.48
SCUBE3-201ENST00000274938 CACNA1AO00555 2505 aa5.8□□□□□ -1.48
SCUBE3-201ENST00000274938 PTPRSQ13332 1948 aa5.8□□□□□ -1.48
SCUBE3-201ENST00000274938 RAI1Q7Z5J4 1906 aaPredicted RBP5.79□□□□□ -1.48
SCUBE3-201ENST00000274938 SONP18583 2426 aaKnown RBP5.78□□□□□ -1.48
SCUBE3-201ENST00000274938 WIPF1O43516 503 aa5.78□□□□□ -1.48
SCUBE3-201ENST00000274938 CENPFP49454 3210 aa5.78□□□□□ -1.48
SCUBE3-201ENST00000274938 DSCR10P59022 87 aa5.78□□□□□ -1.48
SCUBE3-201ENST00000274938 PLA2G2DQ9UNK4 145 aa5.78□□□□□ -1.48
SCUBE3-201ENST00000274938 H3BS24 57 aa5.76□□□□□ -1.49
SCUBE3-201ENST00000274938 Q8N377 158 aa5.76□□□□□ -1.49
SCUBE3-201ENST00000274938 FAM168BA1KXE4 195 aa5.76□□□□□ -1.49
SCUBE3-201ENST00000274938 PTPRBP23467 1997 aa5.76□□□□□ -1.49
SCUBE3-201ENST00000274938 FAM104AQ969W3 186 aa5.76□□□□□ -1.49
SCUBE3-201ENST00000274938 COL5A1P20908 1838 aaPredicted RBP5.76□□□□□ -1.49
SCUBE3-201ENST00000274938 TLX1NBP0CAT3 122 aa5.75□□□□□ -1.49
SCUBE3-201ENST00000274938 C9orf129Q5T035 196 aaKnown RBP5.75□□□□□ -1.49
SCUBE3-201ENST00000274938 C15orf56Q8N910 161 aa5.75□□□□□ -1.49
SCUBE3-201ENST00000274938 Q1T7F1 81 aa5.75□□□□□ -1.49
SCUBE3-201ENST00000274938 PRR34Q9NV39 138 aa5.75□□□□□ -1.49
SCUBE3-201ENST00000274938 PCNTO95613 3336 aa5.74□□□□□ -1.49
SCUBE3-201ENST00000274938 HIVEP3Q5T1R4 2406 aa5.74□□□□□ -1.49
SCUBE3-201ENST00000274938 CPAMD8Q8IZJ3 1885 aa5.74□□□□□ -1.49
SCUBE3-201ENST00000274938 DNAH12Q6ZR08 3092 aa5.74□□□□□ -1.49
SCUBE3-201ENST00000274938 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
SCUBE3-201ENST00000274938 ZNF861PO60384 105 aa5.73□□□□□ -1.49
SCUBE3-201ENST00000274938 LINC00304Q8N9R0 145 aa5.73□□□□□ -1.49
SCUBE3-201ENST00000274938 EIF4EBP3O60516 100 aaPredicted RBP5.72□□□□□ -1.49
SCUBE3-201ENST00000274938 ADAMTS20P59510 1910 aa5.72□□□□□ -1.49
SCUBE3-201ENST00000274938 LINC01554Q52M75 96 aa5.71□□□□□ -1.5
SCUBE3-201ENST00000274938 OBSCN-AS1Q96MR7 158 aa5.71□□□□□ -1.5
SCUBE3-201ENST00000274938 COX6B2Q6YFQ2 88 aa5.7□□□□□ -1.5
SCUBE3-201ENST00000274938 CSNK1G2-AS1Q8NCQ2 148 aa5.7□□□□□ -1.5
SCUBE3-201ENST00000274938 PIEZO1Q92508 2521 aa5.69□□□□□ -1.5
SCUBE3-201ENST00000274938 A0A1W2PNM2 257 aa5.69□□□□□ -1.5
SCUBE3-201ENST00000274938 J3QL48 77 aa5.68□□□□□ -1.5
SCUBE3-201ENST00000274938 LINC00612Q8N6U2 182 aa5.68□□□□□ -1.5
SCUBE3-201ENST00000274938 IGLV5-48A0A075B6I7 105 aa5.67□□□□□ -1.5
SCUBE3-201ENST00000274938 Q75L30 129 aa5.67□□□□□ -1.5
SCUBE3-201ENST00000274938 ABCA2Q9BZC7 2435 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms