RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 HTN3P15516 51 aa8.83□□□□□ -1
COL8A1-202ENST00000273342 XAGE1AQ9HD64 81 aa8.83□□□□□ -1
COL8A1-202ENST00000273342 REG3AQ06141 175 aa8.81□□□□□ -1
COL8A1-202ENST00000273342 Q5XG85 94 aa8.81□□□□□ -1
COL8A1-202ENST00000273342 LINC00575Q6W349 94 aa8.81□□□□□ -1
COL8A1-202ENST00000273342 LINC00482Q8N8I6 264 aa8.81□□□□□ -1
COL8A1-202ENST00000273342 IGLV1-51P01701 117 aa8.81□□□□□ -1
COL8A1-202ENST00000273342 RMI2Q96E14 147 aa8.81□□□□□ -1
COL8A1-202ENST00000273342 LINC01547P58512 204 aaPredicted RBP8.8□□□□□ -1
COL8A1-202ENST00000273342 LINC00167Q96N53 147 aa8.8□□□□□ -1
COL8A1-202ENST00000273342 TEP1Q99973 2627 aaKnown RBP8.8□□□□□ -1
COL8A1-202ENST00000273342 Q6ZQT0 140 aa8.8□□□□□ -1
COL8A1-202ENST00000273342 TENM1Q9UKZ4 2725 aa8.79□□□□□ -1
COL8A1-202ENST00000273342 CD164L2Q6UWJ8 174 aa8.79□□□□□ -1
COL8A1-202ENST00000273342 Q6ZVQ6 151 aa8.79□□□□□ -1
COL8A1-202ENST00000273342 PRO0255Q9UI72 69 aa8.79□□□□□ -1
COL8A1-202ENST00000273342 FAM236DA0A1B0GTK5 79 aa8.78□□□□□ -1
COL8A1-202ENST00000273342 FAM236CP0DP71 79 aa8.78□□□□□ -1
COL8A1-202ENST00000273342 A0A1B0GUV1 79 aa8.78□□□□□ -1
COL8A1-202ENST00000273342 FLNBO75369 2602 aaKnown RBP8.78□□□□□ -1
COL8A1-202ENST00000273342 OTOGQ6ZRI0 2925 aa8.78□□□□□ -1
COL8A1-202ENST00000273342 SPAG11BQ08648 103 aa8.78□□□□□ -1
COL8A1-202ENST00000273342 ATP5EP2Q5VTU8 51 aa8.78□□□□□ -1
COL8A1-202ENST00000273342 KRTAP1-3Q8IUG1 177 aa8.78□□□□□ -1
COL8A1-202ENST00000273342 CYSRT1A8MQ03 144 aa8.77□□□□□ -1.01
COL8A1-202ENST00000273342 DEFB135Q30KP9 77 aa8.77□□□□□ -1.01
COL8A1-202ENST00000273342 HIVEP1P15822 2718 aa8.76□□□□□ -1.01
COL8A1-202ENST00000273342 NDUFC2O95298 119 aa8.76□□□□□ -1.01
COL8A1-202ENST00000273342 Q8N9L7 120 aa8.76□□□□□ -1.01
COL8A1-202ENST00000273342 TRRAPQ9Y4A5 3859 aa8.76□□□□□ -1.01
COL8A1-202ENST00000273342 ZNF561-AS1K7EIQ3 104 aa8.76□□□□□ -1.01
COL8A1-202ENST00000273342 KLK12Q9UKR0 248 aa8.76□□□□□ -1.01
COL8A1-202ENST00000273342 TRBV10-3A0A0K0K1G6 114 aa8.75□□□□□ -1.01
COL8A1-202ENST00000273342 H7BZZ5 65 aa8.75□□□□□ -1.01
COL8A1-202ENST00000273342 LYPD5Q6UWN5 251 aa8.75□□□□□ -1.01
COL8A1-202ENST00000273342 F8WEM9 126 aa8.75□□□□□ -1.01
COL8A1-202ENST00000273342 CMC4P56277 68 aaPredicted RBP8.74□□□□□ -1.01
COL8A1-202ENST00000273342 TM2D3Q9BRN9 247 aa8.74□□□□□ -1.01
COL8A1-202ENST00000273342 X6R8D5 127 aa8.74□□□□□ -1.01
COL8A1-202ENST00000273342 COX17Q14061 63 aa8.74□□□□□ -1.01
COL8A1-202ENST00000273342 PDZD2O15018 2839 aa8.74□□□□□ -1.01
COL8A1-202ENST00000273342 PKD1L1Q8TDX9 2849 aa8.72□□□□□ -1.01
COL8A1-202ENST00000273342 TRAV7A0A075B6U4 112 aa8.72□□□□□ -1.01
COL8A1-202ENST00000273342 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.72□□□□□ -1.01
COL8A1-202ENST00000273342 HIGD2BQ4VC39 106 aa8.71□□□□□ -1.01
COL8A1-202ENST00000273342 MUC7Q8TAX7 377 aa8.71□□□□□ -1.01
COL8A1-202ENST00000273342 CELA1Q9UNI1 258 aa8.7□□□□□ -1.02
COL8A1-202ENST00000273342 F8P00451 2351 aa8.7□□□□□ -1.02
COL8A1-202ENST00000273342 IGHV4-28A0A0C4DH34 117 aa8.7□□□□□ -1.02
COL8A1-202ENST00000273342 DAD1P61803 113 aa8.7□□□□□ -1.02
COL8A1-202ENST00000273342 LINC00474Q9P2X8 69 aa8.69□□□□□ -1.02
COL8A1-202ENST00000273342 LOC110117498A0A087WWA1 95 aa8.68□□□□□ -1.02
COL8A1-202ENST00000273342 DIRC1Q969H9 104 aa8.68□□□□□ -1.02
COL8A1-202ENST00000273342 IGLV6-57P01721 117 aa8.68□□□□□ -1.02
COL8A1-202ENST00000273342 LINC00336Q6ZUF6 198 aa8.68□□□□□ -1.02
COL8A1-202ENST00000273342 NDUFC2-KCTD14E9PQ53 114 aa8.67□□□□□ -1.02
COL8A1-202ENST00000273342 ZNF73O43830 326 aaPredicted RBP8.67□□□□□ -1.02
COL8A1-202ENST00000273342 C6orf48Q9UBA6 75 aa8.67□□□□□ -1.02
COL8A1-202ENST00000273342 LINC00612Q8N6U2 182 aa8.67□□□□□ -1.02
COL8A1-202ENST00000273342 DEFB105AQ8NG35 78 aa8.66□□□□□ -1.02
COL8A1-202ENST00000273342 C3orf84H3BNL1 204 aa8.66□□□□□ -1.02
COL8A1-202ENST00000273342 SERP1Q9Y6X1 66 aa8.66□□□□□ -1.02
COL8A1-202ENST00000273342 NOTCH1P46531 2555 aa8.66□□□□□ -1.02
COL8A1-202ENST00000273342 COX7BP24311 80 aa8.65□□□□□ -1.02
COL8A1-202ENST00000273342 KRTAP10-3P60369 221 aa8.65□□□□□ -1.02
COL8A1-202ENST00000273342 BPY2O14599 106 aa8.64□□□□□ -1.03
COL8A1-202ENST00000273342 KLKP1Q107X0 134 aa8.64□□□□□ -1.03
COL8A1-202ENST00000273342 NREPQ16612 68 aa8.63□□□□□ -1.03
COL8A1-202ENST00000273342 FP248Q71RG6 208 aaPredicted RBP8.63□□□□□ -1.03
COL8A1-202ENST00000273342 MPLKIPQ8TAP9 179 aa8.63□□□□□ -1.03
COL8A1-202ENST00000273342 KRTAP1-1Q07627 177 aa8.62□□□□□ -1.03
COL8A1-202ENST00000273342 CAMK2N2Q96S95 79 aa8.62□□□□□ -1.03
COL8A1-202ENST00000273342 STAB1Q9NY15 2570 aa8.62□□□□□ -1.03
COL8A1-202ENST00000273342 A0A0J9YWU9 116 aa8.62□□□□□ -1.03
COL8A1-202ENST00000273342 IGHV4-30-4P0DP06 118 aa8.62□□□□□ -1.03
COL8A1-202ENST00000273342 MIFP14174 115 aa8.62□□□□□ -1.03
COL8A1-202ENST00000273342 CXCL6P80162 114 aa8.62□□□□□ -1.03
COL8A1-202ENST00000273342 TRBV7-6A0A0J9YX20 115 aa8.61□□□□□ -1.03
COL8A1-202ENST00000273342 TRBV7-4A0A0J9YYF1 115 aa8.61□□□□□ -1.03
COL8A1-202ENST00000273342 PKIGQ9Y2B9 76 aa8.61□□□□□ -1.03
COL8A1-202ENST00000273342 INAFM1C9JVW0 142 aa8.6□□□□□ -1.03
COL8A1-202ENST00000273342 C1orf43Q9BWL3 253 aa8.6□□□□□ -1.03
COL8A1-202ENST00000273342 MAST4O15021 2626 aa8.6□□□□□ -1.03
COL8A1-202ENST00000273342 BAHCC1Q9P281 2608 aa8.6□□□□□ -1.03
COL8A1-202ENST00000273342 LYRM9A8MSI8 78 aa8.6□□□□□ -1.03
COL8A1-202ENST00000273342 WIPF1O43516 503 aa8.6□□□□□ -1.03
COL8A1-202ENST00000273342 FBN1P35555 2871 aaKnown RBP8.6□□□□□ -1.03
COL8A1-202ENST00000273342 NSD1Q96L73 2696 aaPredicted RBP8.59□□□□□ -1.03
COL8A1-202ENST00000273342 C9orf66Q5T8R8 295 aa8.59□□□□□ -1.03
COL8A1-202ENST00000273342 TMEM254Q8TBM7 123 aa8.59□□□□□ -1.03
COL8A1-202ENST00000273342 PDE6GP18545 87 aa8.59□□□□□ -1.04
COL8A1-202ENST00000273342 NBEAL1Q6ZS30 2694 aa8.58□□□□□ -1.04
COL8A1-202ENST00000273342 ELOF1P60002 83 aaKnown RBP8.58□□□□□ -1.04
COL8A1-202ENST00000273342 FAM229BQ4G0N7 80 aa8.58□□□□□ -1.04
COL8A1-202ENST00000273342 Q6ZRU5 148 aa8.58□□□□□ -1.04
COL8A1-202ENST00000273342 WFDC10BQ8IUB3 73 aa8.58□□□□□ -1.04
COL8A1-202ENST00000273342 LELP1Q5T871 98 aa8.57□□□□□ -1.04
COL8A1-202ENST00000273342 C16orf95Q9H693 158 aa8.57□□□□□ -1.04
COL8A1-202ENST00000273342 ANK3Q12955 4377 aaKnown RBP8.57□□□□□ -1.04
COL8A1-202ENST00000273342 A0A0U1RQV1 116 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms