RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 PFN2P35080 140 aa5.74□□□□□ -1.49
VPS41-201ENST00000265745 KRTAP13-1Q8IUC0 172 aa5.74□□□□□ -1.49
VPS41-201ENST00000265745 NKAPP1Q8N9T2 125 aa5.74□□□□□ -1.49
VPS41-201ENST00000265745 SCO1O75880 301 aa5.73□□□□□ -1.49
VPS41-201ENST00000265745 HBDP02042 147 aa5.73□□□□□ -1.49
VPS41-201ENST00000265745 PMCHL1Q16048 86 aa5.73□□□□□ -1.49
VPS41-201ENST00000265745 PRR4Q16378 134 aa5.73□□□□□ -1.49
VPS41-201ENST00000265745 SND1-IT1Q9HBX3 110 aa5.73□□□□□ -1.49
VPS41-201ENST00000265745 TSPAN13O95857 204 aa5.72□□□□□ -1.49
VPS41-201ENST00000265745 COX17Q14061 63 aa5.72□□□□□ -1.49
VPS41-201ENST00000265745 BAGE3Q86Y29 109 aa5.72□□□□□ -1.49
VPS41-201ENST00000265745 ANAPC11Q9NYG5 84 aa5.72□□□□□ -1.49
VPS41-201ENST00000265745 ERG28Q9UKR5 140 aa5.72□□□□□ -1.49
VPS41-201ENST00000265745 IGKV2-28A0A075B6P5 120 aa5.71□□□□□ -1.5
VPS41-201ENST00000265745 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
VPS41-201ENST00000265745 C11orf86A6NJI1 115 aa5.71□□□□□ -1.5
VPS41-201ENST00000265745 IGKV2D-28P01615 120 aa5.71□□□□□ -1.5
VPS41-201ENST00000265745 UBE2AP49459 152 aa5.71□□□□□ -1.5
VPS41-201ENST00000265745 TYMSOSQ8TAI1 123 aa5.71□□□□□ -1.5
VPS41-201ENST00000265745 KRTAP4-6Q9BYQ5 205 aa5.71□□□□□ -1.5
VPS41-201ENST00000265745 APOC3P02656 99 aa5.7□□□□□ -1.5
VPS41-201ENST00000265745 RPL24P83731 157 aaKnown RBP5.7□□□□□ -1.5
VPS41-201ENST00000265745 KRTAP13-2Q52LG2 175 aa5.7□□□□□ -1.5
VPS41-201ENST00000265745 TMEM170BQ5T4T1 132 aa5.7□□□□□ -1.5
VPS41-201ENST00000265745 SFTA2Q6UW10 78 aa5.7□□□□□ -1.5
VPS41-201ENST00000265745 Q8NDZ9 215 aa5.7□□□□□ -1.5
VPS41-201ENST00000265745 ZNF625Q96I27 306 aaPredicted RBP5.7□□□□□ -1.5
VPS41-201ENST00000265745 MUC2Q02817 5179 aa5.69□□□□□ -1.5
VPS41-201ENST00000265745 A4D1N5 150 aa5.69□□□□□ -1.5
VPS41-201ENST00000265745 TMEM238C9JI98 176 aa5.69□□□□□ -1.5
VPS41-201ENST00000265745 SNAPINO95295 136 aa5.69□□□□□ -1.5
VPS41-201ENST00000265745 FAM229BQ4G0N7 80 aa5.69□□□□□ -1.5
VPS41-201ENST00000265745 SVBPQ8N300 66 aa5.69□□□□□ -1.5
VPS41-201ENST00000265745 TMEM126AQ9H061 195 aa5.69□□□□□ -1.5
VPS41-201ENST00000265745 PAM16Q9Y3D7 125 aa5.69□□□□□ -1.5
VPS41-201ENST00000265745 CHTOPQ9Y3Y2 248 aaKnown RBP5.69□□□□□ -1.5
VPS41-201ENST00000265745 M0R378 163 aa5.68□□□□□ -1.5
VPS41-201ENST00000265745 PRLHP81277 87 aa5.68□□□□□ -1.5
VPS41-201ENST00000265745 UBE2V1Q13404 147 aa5.68□□□□□ -1.5
VPS41-201ENST00000265745 YPEL4Q96NS1 127 aa5.68□□□□□ -1.5
VPS41-201ENST00000265745 SNRPEP62304 92 aaKnown RBP5.67□□□□□ -1.5
VPS41-201ENST00000265745 NDUFA5Q16718 116 aa5.67□□□□□ -1.5
VPS41-201ENST00000265745 FAM19A1Q7Z5A9 133 aa5.67□□□□□ -1.5
VPS41-201ENST00000265745 CHCHD1Q96BP2 118 aaKnown RBP5.67□□□□□ -1.5
VPS41-201ENST00000265745 TRAV12-1A0A0B4J245 112 aa5.66□□□□□ -1.5
VPS41-201ENST00000265745 TMEM223A0PJW6 202 aa5.66□□□□□ -1.5
VPS41-201ENST00000265745 LINC00158P58513 81 aa5.66□□□□□ -1.5
VPS41-201ENST00000265745 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
VPS41-201ENST00000265745 IFI27L1Q96BM0 104 aa5.66□□□□□ -1.5
VPS41-201ENST00000265745 PLEKHB2Q96CS7 222 aa5.66□□□□□ -1.5
VPS41-201ENST00000265745 IGKV2D-26A0A0A0MRZ7 120 aa5.65□□□□□ -1.5
VPS41-201ENST00000265745 A0A0U1RRA0 63 aa5.64□□□□□ -1.51
VPS41-201ENST00000265745 CBLN2Q8IUK8 224 aa5.64□□□□□ -1.51
VPS41-201ENST00000265745 LINC00304Q8N9R0 145 aa5.64□□□□□ -1.51
VPS41-201ENST00000265745 CTAG1AP78358 180 aa5.63□□□□□ -1.51
VPS41-201ENST00000265745 MPLKIPQ8TAP9 179 aa5.63□□□□□ -1.51
VPS41-201ENST00000265745 ATP6V1G1O75348 118 aa5.62□□□□□ -1.51
VPS41-201ENST00000265745 SMIM13P0DJ93 91 aa5.62□□□□□ -1.51
VPS41-201ENST00000265745 SEC61BP60468 96 aaKnown RBP5.62□□□□□ -1.51
VPS41-201ENST00000265745 BOD1L2Q8IYS8 172 aa5.62□□□□□ -1.51
VPS41-201ENST00000265745 FAM19A2Q8N3H0 131 aa5.62□□□□□ -1.51
VPS41-201ENST00000265745 RETNLBQ9BQ08 111 aa5.62□□□□□ -1.51
VPS41-201ENST00000265745 HIGD2AQ9BW72 106 aa5.62□□□□□ -1.51
VPS41-201ENST00000265745 LINC00587B1AMM8 73 aa5.61□□□□□ -1.51
VPS41-201ENST00000265745 HSBP1O75506 76 aa5.61□□□□□ -1.51
VPS41-201ENST00000265745 HERV-K104P63124 156 aa5.61□□□□□ -1.51
VPS41-201ENST00000265745 GAGE2AQ6NT46 116 aa5.61□□□□□ -1.51
VPS41-201ENST00000265745 C3orf22Q8N5N4 141 aa5.61□□□□□ -1.51
VPS41-201ENST00000265745 MIR7-3HGQ8N6C7 128 aa5.61□□□□□ -1.51
VPS41-201ENST00000265745 NDUFA12Q9UI09 145 aa5.61□□□□□ -1.51
VPS41-201ENST00000265745 SPRR1AP35321 89 aa5.6□□□□□ -1.51
VPS41-201ENST00000265745 MEIG1Q5JSS6 88 aa5.6□□□□□ -1.51
VPS41-201ENST00000265745 SPRR4Q96PI1 79 aa5.6□□□□□ -1.51
VPS41-201ENST00000265745 KCNQ1DNQ9H478 68 aa5.6□□□□□ -1.51
VPS41-201ENST00000265745 MYMXA0A1B0GTQ4 84 aa5.59□□□□□ -1.51
VPS41-201ENST00000265745 KRTAP4-16G5E9R7 235 aaPredicted RBP5.59□□□□□ -1.51
VPS41-201ENST00000265745 TRGC2P03986 189 aa5.59□□□□□ -1.51
VPS41-201ENST00000265745 IGLV7-46A0A075B6I9 117 aa5.58□□□□□ -1.52
VPS41-201ENST00000265745 LOC107984156A0A0G2JMH3 177 aa5.58□□□□□ -1.52
VPS41-201ENST00000265745 NCR3O14931 201 aa5.58□□□□□ -1.52
VPS41-201ENST00000265745 LEPROTL1O95214 131 aa5.58□□□□□ -1.52
VPS41-201ENST00000265745 SPAG11AQ6PDA7 123 aa5.58□□□□□ -1.52
VPS41-201ENST00000265745 ARL17AQ8IVW1 177 aa5.58□□□□□ -1.52
VPS41-201ENST00000265745 LINC00337Q8N6G1 96 aa5.58□□□□□ -1.52
VPS41-201ENST00000265745 MAP1LC3CQ9BXW4 147 aa5.58□□□□□ -1.52
VPS41-201ENST00000265745 TRBV10-3A0A0K0K1G6 114 aa5.57□□□□□ -1.52
VPS41-201ENST00000265745 H0Y8G0 127 aa5.57□□□□□ -1.52
VPS41-201ENST00000265745 LEPROTO15243 131 aa5.57□□□□□ -1.52
VPS41-201ENST00000265745 SERF1AO75920 110 aa5.57□□□□□ -1.52
VPS41-201ENST00000265745 TSPEAR-AS2P59090 65 aa5.57□□□□□ -1.52
VPS41-201ENST00000265745 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
VPS41-201ENST00000265745 Q75L30 129 aa5.57□□□□□ -1.52
VPS41-201ENST00000265745 SMCR5Q8TEV8 140 aa5.57□□□□□ -1.52
VPS41-201ENST00000265745 ZNF706Q9Y5V0 76 aaPredicted RBP5.57□□□□□ -1.52
VPS41-201ENST00000265745 C5orf52A6NGY3 159 aa5.56□□□□□ -1.52
VPS41-201ENST00000265745 PLNP26678 52 aa5.56□□□□□ -1.52
VPS41-201ENST00000265745 A0A0U1RQV1 116 aa5.55□□□□□ -1.52
VPS41-201ENST00000265745 ETDCA0A1B0GVM5 59 aa5.55□□□□□ -1.52
VPS41-201ENST00000265745 J3QQQ9 107 aa5.55□□□□□ -1.52
VPS41-201ENST00000265745 DAND5Q8N907 189 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms