RNA–Protein interactions for RNA: ENST00000261203.7

LIN7A-201, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-201ENST00000261203 SVBPQ8N300 66 aa5.51□□□□□ -1.53
LIN7A-201ENST00000261203 GAGE10A6NGK3 116 aa5.5□□□□□ -1.53
LIN7A-201ENST00000261203 PMCHL1Q16048 86 aa5.5□□□□□ -1.53
LIN7A-201ENST00000261203 BAGE3Q86Y29 109 aa5.5□□□□□ -1.53
LIN7A-201ENST00000261203 ERG28Q9UKR5 140 aa5.5□□□□□ -1.53
LIN7A-201ENST00000261203 C11orf86A6NJI1 115 aa5.49□□□□□ -1.53
LIN7A-201ENST00000261203 CRYGAP11844 174 aa5.49□□□□□ -1.53
LIN7A-201ENST00000261203 UBE2AP49459 152 aa5.49□□□□□ -1.53
LIN7A-201ENST00000261203 RPL24P83731 157 aaKnown RBP5.49□□□□□ -1.53
LIN7A-201ENST00000261203 TMEM170BQ5T4T1 132 aa5.49□□□□□ -1.53
LIN7A-201ENST00000261203 SND1-IT1Q9HBX3 110 aa5.49□□□□□ -1.53
LIN7A-201ENST00000261203 MUC2Q02817 5179 aa5.49□□□□□ -1.53
LIN7A-201ENST00000261203 LPAP08519 4548 aa5.48□□□□□ -1.53
LIN7A-201ENST00000261203 IGKV2-28A0A075B6P5 120 aa5.48□□□□□ -1.53
LIN7A-201ENST00000261203 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
LIN7A-201ENST00000261203 IGKV2D-28P01615 120 aa5.48□□□□□ -1.53
LIN7A-201ENST00000261203 KRTAP13-1Q8IUC0 172 aa5.48□□□□□ -1.53
LIN7A-201ENST00000261203 CHCHD1Q96BP2 118 aaKnown RBP5.48□□□□□ -1.53
LIN7A-201ENST00000261203 CHTOPQ9Y3Y2 248 aaKnown RBP5.48□□□□□ -1.53
LIN7A-201ENST00000261203 A0A087X002 238 aa5.47□□□□□ -1.53
LIN7A-201ENST00000261203 TRAV12-1A0A0B4J245 112 aa5.47□□□□□ -1.53
LIN7A-201ENST00000261203 VPREB1P12018 145 aa5.47□□□□□ -1.53
LIN7A-201ENST00000261203 PRR4Q16378 134 aa5.47□□□□□ -1.53
LIN7A-201ENST00000261203 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
LIN7A-201ENST00000261203 ZNF625Q96I27 306 aaPredicted RBP5.47□□□□□ -1.53
LIN7A-201ENST00000261203 SCO1O75880 301 aa5.46□□□□□ -1.54
LIN7A-201ENST00000261203 FAM229BQ4G0N7 80 aa5.46□□□□□ -1.54
LIN7A-201ENST00000261203 IFI27L1Q96BM0 104 aa5.46□□□□□ -1.54
LIN7A-201ENST00000261203 TMEM223A0PJW6 202 aa5.45□□□□□ -1.54
LIN7A-201ENST00000261203 YPEL4Q96NS1 127 aa5.45□□□□□ -1.54
LIN7A-201ENST00000261203 TMEM126AQ9H061 195 aa5.45□□□□□ -1.54
LIN7A-201ENST00000261203 TSPAN13O95857 204 aa5.44□□□□□ -1.54
LIN7A-201ENST00000261203 LINC00158P58513 81 aa5.44□□□□□ -1.54
LIN7A-201ENST00000261203 PRLHP81277 87 aa5.44□□□□□ -1.54
LIN7A-201ENST00000261203 FAM19A1Q7Z5A9 133 aa5.44□□□□□ -1.54
LIN7A-201ENST00000261203 TMEM238C9JI98 176 aa5.43□□□□□ -1.54
LIN7A-201ENST00000261203 M0R378 163 aa5.43□□□□□ -1.54
LIN7A-201ENST00000261203 ATP6V1G1O75348 118 aa5.43□□□□□ -1.54
LIN7A-201ENST00000261203 HSBP1O75506 76 aa5.43□□□□□ -1.54
LIN7A-201ENST00000261203 ANAPC11Q9NYG5 84 aa5.43□□□□□ -1.54
LIN7A-201ENST00000261203 IGKV2D-26A0A0A0MRZ7 120 aa5.42□□□□□ -1.54
LIN7A-201ENST00000261203 LINC00587B1AMM8 73 aa5.42□□□□□ -1.54
LIN7A-201ENST00000261203 HERV-K104P63124 156 aa5.42□□□□□ -1.54
LIN7A-201ENST00000261203 CTAG1AP78358 180 aa5.42□□□□□ -1.54
LIN7A-201ENST00000261203 KRTAP13-2Q52LG2 175 aa5.42□□□□□ -1.54
LIN7A-201ENST00000261203 Q8NDZ9 215 aa5.42□□□□□ -1.54
LIN7A-201ENST00000261203 FAT4Q6V0I7 4981 aa5.41□□□□□ -1.54
LIN7A-201ENST00000261203 C21orf62-AS1Q17RA5 79 aa5.41□□□□□ -1.54
LIN7A-201ENST00000261203 MEIG1Q5JSS6 88 aa5.41□□□□□ -1.54
LIN7A-201ENST00000261203 CBLN2Q8IUK8 224 aa5.41□□□□□ -1.54
LIN7A-201ENST00000261203 LINC00304Q8N9R0 145 aa5.41□□□□□ -1.54
LIN7A-201ENST00000261203 A0A0U1RRA0 63 aa5.4□□□□□ -1.54
LIN7A-201ENST00000261203 SMIM13P0DJ93 91 aa5.4□□□□□ -1.54
LIN7A-201ENST00000261203 BOD1L2Q8IYS8 172 aa5.4□□□□□ -1.54
LIN7A-201ENST00000261203 FAM19A2Q8N3H0 131 aa5.4□□□□□ -1.54
LIN7A-201ENST00000261203 PLEKHB2Q96CS7 222 aa5.4□□□□□ -1.54
LIN7A-201ENST00000261203 MAP1LC3CQ9BXW4 147 aa5.4□□□□□ -1.54
LIN7A-201ENST00000261203 NDUFA12Q9UI09 145 aa5.4□□□□□ -1.54
LIN7A-201ENST00000261203 MYMXA0A1B0GTQ4 84 aa5.39□□□□□ -1.55
LIN7A-201ENST00000261203 PRYO14603 147 aa5.39□□□□□ -1.55
LIN7A-201ENST00000261203 LEPROTL1O95214 131 aa5.39□□□□□ -1.55
LIN7A-201ENST00000261203 TRGC2P03986 189 aa5.39□□□□□ -1.55
LIN7A-201ENST00000261203 PLNP26678 52 aa5.39□□□□□ -1.55
LIN7A-201ENST00000261203 MIR7-3HGQ8N6C7 128 aa5.39□□□□□ -1.55
LIN7A-201ENST00000261203 HIGD2AQ9BW72 106 aa5.39□□□□□ -1.55
LIN7A-201ENST00000261203 ZNF706Q9Y5V0 76 aaPredicted RBP5.39□□□□□ -1.55
LIN7A-201ENST00000261203 H0Y8G0 127 aa5.38□□□□□ -1.55
LIN7A-201ENST00000261203 HSPB8Q9UJY1 196 aa5.38□□□□□ -1.55
LIN7A-201ENST00000261203 NCR3O14931 201 aa5.37□□□□□ -1.55
LIN7A-201ENST00000261203 LEPROTO15243 131 aa5.37□□□□□ -1.55
LIN7A-201ENST00000261203 SERF1AO75920 110 aa5.37□□□□□ -1.55
LIN7A-201ENST00000261203 S100A12P80511 92 aa5.37□□□□□ -1.55
LIN7A-201ENST00000261203 LINC00337Q8N6G1 96 aa5.37□□□□□ -1.55
LIN7A-201ENST00000261203 KCNQ1DNQ9H478 68 aa5.37□□□□□ -1.55
LIN7A-201ENST00000261203 SPRR1AP35321 89 aa5.36□□□□□ -1.55
LIN7A-201ENST00000261203 LINC00310P59036 64 aa5.36□□□□□ -1.55
LIN7A-201ENST00000261203 HERVK_113P61574 105 aa5.36□□□□□ -1.55
LIN7A-201ENST00000261203 SPRR4Q96PI1 79 aa5.36□□□□□ -1.55
LIN7A-201ENST00000261203 LOC107984156A0A0G2JMH3 177 aa5.35□□□□□ -1.55
LIN7A-201ENST00000261203 TRBV10-3A0A0K0K1G6 114 aa5.35□□□□□ -1.55
LIN7A-201ENST00000261203 A0A0U1RQV1 116 aa5.35□□□□□ -1.55
LIN7A-201ENST00000261203 ETDCA0A1B0GVM5 59 aa5.35□□□□□ -1.55
LIN7A-201ENST00000261203 J3QQQ9 107 aa5.35□□□□□ -1.55
LIN7A-201ENST00000261203 DPM2O94777 84 aa5.35□□□□□ -1.55
LIN7A-201ENST00000261203 NMUP48645 174 aa5.35□□□□□ -1.55
LIN7A-201ENST00000261203 SPAG11AQ6PDA7 123 aa5.35□□□□□ -1.55
LIN7A-201ENST00000261203 ARL17AQ8IVW1 177 aa5.35□□□□□ -1.55
LIN7A-201ENST00000261203 C3orf22Q8N5N4 141 aa5.35□□□□□ -1.55
LIN7A-201ENST00000261203 RETNLBQ9BQ08 111 aa5.35□□□□□ -1.55
LIN7A-201ENST00000261203 TRBV10-2A0A0K0K1G8 114 aa5.34□□□□□ -1.55
LIN7A-201ENST00000261203 KRTAP4-16G5E9R7 235 aaPredicted RBP5.34□□□□□ -1.55
LIN7A-201ENST00000261203 TSPEAR-AS2P59090 65 aa5.34□□□□□ -1.55
LIN7A-201ENST00000261203 TPRXLQ17RH7 258 aa5.34□□□□□ -1.55
LIN7A-201ENST00000261203 MIEN1Q9BRT3 115 aa5.34□□□□□ -1.55
LIN7A-201ENST00000261203 IGLV7-46A0A075B6I9 117 aa5.33□□□□□ -1.56
LIN7A-201ENST00000261203 IGKCP01834 107 aa5.33□□□□□ -1.56
LIN7A-201ENST00000261203 FABP4P15090 132 aa5.33□□□□□ -1.56
LIN7A-201ENST00000261203 LGALS3P17931 250 aaKnown RBP5.33□□□□□ -1.56
LIN7A-201ENST00000261203 LCE1DQ5T752 114 aa5.33□□□□□ -1.56
LIN7A-201ENST00000261203 SPANXB1Q9NS25 103 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms