RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 A0A0J9YWU9 116 aa10.49□□□□□ -0.73
KCTD3-201ENST00000259154 FUSP35637 526 aaKnown RBP eCLIP10.49□□□□□ -0.73
KCTD3-201ENST00000259154 FAM19A4Q96LR4 140 aa10.48□□□□□ -0.73
KCTD3-201ENST00000259154 SMR3AQ99954 134 aa10.48□□□□□ -0.73
KCTD3-201ENST00000259154 SETXQ7Z333 2677 aaKnown RBP10.48□□□□□ -0.73
KCTD3-201ENST00000259154 FAM30AQ9NZY2 134 aa10.48□□□□□ -0.73
KCTD3-201ENST00000259154 HELZ2Q9BYK8 2649 aaKnown RBP10.47□□□□□ -0.73
KCTD3-201ENST00000259154 FHL2Q14192 279 aa10.47□□□□□ -0.73
KCTD3-201ENST00000259154 NDUFC2-KCTD14E9PQ53 114 aa10.46□□□□□ -0.73
KCTD3-201ENST00000259154 CRYGAP11844 174 aa10.46□□□□□ -0.73
KCTD3-201ENST00000259154 LINC01006Q8NI28 216 aa10.46□□□□□ -0.73
KCTD3-201ENST00000259154 ETDCA0A1B0GVM5 59 aa10.46□□□□□ -0.74
KCTD3-201ENST00000259154 NOTCH1P46531 2555 aa10.46□□□□□ -0.74
KCTD3-201ENST00000259154 ITPR2Q14571 2701 aa10.45□□□□□ -0.74
KCTD3-201ENST00000259154 IGLV5-39A0A0G2JS06 123 aa10.45□□□□□ -0.74
KCTD3-201ENST00000259154 MIFP14174 115 aa10.44□□□□□ -0.74
KCTD3-201ENST00000259154 CYSRT1A8MQ03 144 aa10.43□□□□□ -0.74
KCTD3-201ENST00000259154 TRBV10-3A0A0K0K1G6 114 aa10.43□□□□□ -0.74
KCTD3-201ENST00000259154 PSPHP1O15172 72 aa10.43□□□□□ -0.74
KCTD3-201ENST00000259154 DEFB121Q5J5C9 76 aa10.43□□□□□ -0.74
KCTD3-201ENST00000259154 LINC01561Q8N1V8 128 aa10.43□□□□□ -0.74
KCTD3-201ENST00000259154 BRI3O95415 125 aa10.42□□□□□ -0.74
KCTD3-201ENST00000259154 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.42□□□□□ -0.74
KCTD3-201ENST00000259154 A0A087WZ39 114 aa10.42□□□□□ -0.74
KCTD3-201ENST00000259154 ATP5EP2Q5VTU8 51 aa10.42□□□□□ -0.74
KCTD3-201ENST00000259154 INAFM1C9JVW0 142 aa10.42□□□□□ -0.74
KCTD3-201ENST00000259154 Q6ZVQ6 151 aa10.42□□□□□ -0.74
KCTD3-201ENST00000259154 WFDC13Q8IUB5 93 aa10.42□□□□□ -0.74
KCTD3-201ENST00000259154 C11orf72Q8NBR9 251 aa10.42□□□□□ -0.74
KCTD3-201ENST00000259154 C1orf195Q5TG92 126 aa10.41□□□□□ -0.74
KCTD3-201ENST00000259154 RPL37AP8A6NKH3 93 aa10.41□□□□□ -0.74
KCTD3-201ENST00000259154 WFDC10BQ8IUB3 73 aa10.41□□□□□ -0.74
KCTD3-201ENST00000259154 TRAV10A0A0B4J240 114 aa10.41□□□□□ -0.74
KCTD3-201ENST00000259154 V9GYY9 64 aa10.4□□□□□ -0.74
KCTD3-201ENST00000259154 TRAV7A0A075B6U4 112 aa10.4□□□□□ -0.74
KCTD3-201ENST00000259154 TENM4Q6N022 2769 aa10.4□□□□□ -0.74
KCTD3-201ENST00000259154 SMIM26A0A096LP01 95 aa10.4□□□□□ -0.74
KCTD3-201ENST00000259154 NDUFS5O43920 106 aa10.4□□□□□ -0.74
KCTD3-201ENST00000259154 LINC01547P58512 204 aaPredicted RBP10.4□□□□□ -0.74
KCTD3-201ENST00000259154 DEFB116Q30KQ4 102 aa10.4□□□□□ -0.74
KCTD3-201ENST00000259154 KLK9Q2XQG4 91 aa10.39□□□□□ -0.75
KCTD3-201ENST00000259154 FAM19A3Q7Z5A8 133 aa10.39□□□□□ -0.75
KCTD3-201ENST00000259154 IGKV2-24A0A0C4DH68 120 aa10.39□□□□□ -0.75
KCTD3-201ENST00000259154 CYSTM1Q9H1C7 97 aa10.39□□□□□ -0.75
KCTD3-201ENST00000259154 UBR5O95071 2799 aaPredicted RBP10.39□□□□□ -0.75
KCTD3-201ENST00000259154 IGHV3OR16-9A0A0B4J2B5 98 aa10.39□□□□□ -0.75
KCTD3-201ENST00000259154 PSCAO43653 123 aa10.39□□□□□ -0.75
KCTD3-201ENST00000259154 NBEAL1Q6ZS30 2694 aa10.38□□□□□ -0.75
KCTD3-201ENST00000259154 CD164L2Q6UWJ8 174 aa10.38□□□□□ -0.75
KCTD3-201ENST00000259154 HIGD2AQ9BW72 106 aa10.38□□□□□ -0.75
KCTD3-201ENST00000259154 SPART-AS1P0CW21 52 aa10.37□□□□□ -0.75
KCTD3-201ENST00000259154 LINC00474Q9P2X8 69 aa10.37□□□□□ -0.75
KCTD3-201ENST00000259154 SERP1Q9Y6X1 66 aa10.37□□□□□ -0.75
KCTD3-201ENST00000259154 ZNF73O43830 326 aaPredicted RBP10.36□□□□□ -0.75
KCTD3-201ENST00000259154 TRBV7-6A0A0J9YX20 115 aa10.36□□□□□ -0.75
KCTD3-201ENST00000259154 APOC4P55056 127 aa10.36□□□□□ -0.75
KCTD3-201ENST00000259154 BEAN1Q3B7T3 259 aa10.35□□□□□ -0.75
KCTD3-201ENST00000259154 TM2D3Q9BRN9 247 aa10.35□□□□□ -0.75
KCTD3-201ENST00000259154 CR1P17927 2039 aa10.35□□□□□ -0.75
KCTD3-201ENST00000259154 Q8IZM0 81 aa10.35□□□□□ -0.75
KCTD3-201ENST00000259154 PDE6GP18545 87 aa10.34□□□□□ -0.75
KCTD3-201ENST00000259154 VWFP04275 2813 aa10.34□□□□□ -0.75
KCTD3-201ENST00000259154 C10orf25Q5T742 122 aa10.33□□□□□ -0.76
KCTD3-201ENST00000259154 TMEM254Q8TBM7 123 aa10.33□□□□□ -0.76
KCTD3-201ENST00000259154 COL6A5A8TX70 2615 aa10.33□□□□□ -0.76
KCTD3-201ENST00000259154 TEP1Q99973 2627 aaKnown RBP10.33□□□□□ -0.76
KCTD3-201ENST00000259154 C9orf66Q5T8R8 295 aa10.33□□□□□ -0.76
KCTD3-201ENST00000259154 LINC00575Q6W349 94 aa10.33□□□□□ -0.76
KCTD3-201ENST00000259154 LY6G6DO95868 133 aa10.32□□□□□ -0.76
KCTD3-201ENST00000259154 MP68P56378 58 aa10.32□□□□□ -0.76
KCTD3-201ENST00000259154 IGLV5-45A0A087WSX0 123 aa10.32□□□□□ -0.76
KCTD3-201ENST00000259154 LINC00336Q6ZUF6 198 aa10.32□□□□□ -0.76
KCTD3-201ENST00000259154 MUC7Q8TAX7 377 aa10.3□□□□□ -0.76
KCTD3-201ENST00000259154 H0Y9J4 135 aa10.3□□□□□ -0.76
KCTD3-201ENST00000259154 BAHCC1Q9P281 2608 aa10.27□□□□□ -0.76
KCTD3-201ENST00000259154 M0R2N4 97 aa10.27□□□□□ -0.77
KCTD3-201ENST00000259154 SPATA3Q8NHX4 192 aa10.26□□□□□ -0.77
KCTD3-201ENST00000259154 RPS28P62857 69 aaKnown RBP10.26□□□□□ -0.77
KCTD3-201ENST00000259154 PRO0628Q9UI54 55 aa10.26□□□□□ -0.77
KCTD3-201ENST00000259154 PRYO14603 147 aa10.26□□□□□ -0.77
KCTD3-201ENST00000259154 CDK2AP2O75956 126 aa10.25□□□□□ -0.77
KCTD3-201ENST00000259154 UBE2DNLQ8IWF7 75 aa10.25□□□□□ -0.77
KCTD3-201ENST00000259154 A0A096LNT2 108 aa10.24□□□□□ -0.77
KCTD3-201ENST00000259154 C2orf48Q96LS8 159 aa10.24□□□□□ -0.77
KCTD3-201ENST00000259154 CHKB-CPT1BH3BT56 60 aa10.23□□□□□ -0.77
KCTD3-201ENST00000259154 FAM104AQ969W3 186 aa10.23□□□□□ -0.77
KCTD3-201ENST00000259154 NDUFC1O43677 76 aa10.22□□□□□ -0.77
KCTD3-201ENST00000259154 LINC00208Q96KT6 92 aa10.22□□□□□ -0.77
KCTD3-201ENST00000259154 PMAIP1Q13794 54 aa10.22□□□□□ -0.77
KCTD3-201ENST00000259154 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.21□□□□□ -0.78
KCTD3-201ENST00000259154 SYCNQ0VAF6 134 aa10.2□□□□□ -0.78
KCTD3-201ENST00000259154 RETNQ9HD89 108 aa10.19□□□□□ -0.78
KCTD3-201ENST00000259154 A6NED7 52 aa10.19□□□□□ -0.78
KCTD3-201ENST00000259154 Q6ZQT0 140 aa10.19□□□□□ -0.78
KCTD3-201ENST00000259154 SMIM29Q86T20 159 aa10.19□□□□□ -0.78
KCTD3-201ENST00000259154 TENM1Q9UKZ4 2725 aa10.18□□□□□ -0.78
KCTD3-201ENST00000259154 IGLV1-51P01701 117 aa10.18□□□□□ -0.78
KCTD3-201ENST00000259154 M0R378 163 aa10.17□□□□□ -0.78
KCTD3-201ENST00000259154 TRRAPQ9Y4A5 3859 aa10.17□□□□□ -0.78
KCTD3-201ENST00000259154 COX17Q14061 63 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms