RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 APCP25054 2843 aa3.97□□□□□ -1.77
RFX4-201ENST00000229387 ITPR3Q14573 2671 aa3.97□□□□□ -1.77
RFX4-201ENST00000229387 IGLV5-39A0A0G2JS06 123 aa3.97□□□□□ -1.77
RFX4-201ENST00000229387 CRPP02741 224 aa3.97□□□□□ -1.77
RFX4-201ENST00000229387 OCR1Q9BZK8 76 aa3.97□□□□□ -1.77
RFX4-201ENST00000229387 KLK9Q9UKQ9 250 aa3.97□□□□□ -1.77
RFX4-201ENST00000229387 FN1P02751 2386 aaKnown RBP3.96□□□□□ -1.77
RFX4-201ENST00000229387 ITPR2Q14571 2701 aa3.96□□□□□ -1.77
RFX4-201ENST00000229387 HELZ2Q9BYK8 2649 aaKnown RBP3.96□□□□□ -1.77
RFX4-201ENST00000229387 TRBV6-8A0A0A6YYG3 113 aa3.96□□□□□ -1.78
RFX4-201ENST00000229387 B4DSR2 109 aa3.96□□□□□ -1.78
RFX4-201ENST00000229387 BPY2O14599 106 aa3.96□□□□□ -1.78
RFX4-201ENST00000229387 RNASE13Q5GAN3 156 aaKnown RBP3.96□□□□□ -1.78
RFX4-201ENST00000229387 FAM19A3Q7Z5A8 133 aa3.96□□□□□ -1.78
RFX4-201ENST00000229387 LIMD2Q9BT23 127 aa3.96□□□□□ -1.78
RFX4-201ENST00000229387 LCE6AA0A183 80 aa3.96□□□□□ -1.78
RFX4-201ENST00000229387 A8MU10 97 aa3.96□□□□□ -1.78
RFX4-201ENST00000229387 HCG22E2RYF7 251 aa3.96□□□□□ -1.78
RFX4-201ENST00000229387 LECT2O14960 151 aa3.96□□□□□ -1.78
RFX4-201ENST00000229387 ZFAND2AQ8N6M9 145 aa3.96□□□□□ -1.78
RFX4-201ENST00000229387 SMIM11BQ8TCY0 68 aa3.96□□□□□ -1.78
RFX4-201ENST00000229387 Q6ZQT0 140 aa3.96□□□□□ -1.78
RFX4-201ENST00000229387 A6NDX4 124 aa3.95□□□□□ -1.78
RFX4-201ENST00000229387 KIAA0087Q14695 138 aa3.95□□□□□ -1.78
RFX4-201ENST00000229387 SPINK13Q1W4C9 94 aa3.95□□□□□ -1.78
RFX4-201ENST00000229387 MUC4Q99102 2169 aa3.95□□□□□ -1.78
RFX4-201ENST00000229387 HIVEP2P31629 2446 aa3.95□□□□□ -1.78
RFX4-201ENST00000229387 RNASE3P12724 160 aaKnown RBP3.95□□□□□ -1.78
RFX4-201ENST00000229387 AKAP9Q99996 3911 aa3.94□□□□□ -1.78
RFX4-201ENST00000229387 IGHV1OR15-1A0A075B7D0 117 aa3.94□□□□□ -1.78
RFX4-201ENST00000229387 PDE6GP18545 87 aa3.94□□□□□ -1.78
RFX4-201ENST00000229387 SLURP1P55000 103 aa3.94□□□□□ -1.78
RFX4-201ENST00000229387 LINC00337Q8N6G1 96 aa3.94□□□□□ -1.78
RFX4-201ENST00000229387 IGHV3OR16-12A0A075B7B8 117 aa3.94□□□□□ -1.78
RFX4-201ENST00000229387 IGKV2-28A0A075B6P5 120 aa3.94□□□□□ -1.78
RFX4-201ENST00000229387 M0QY20 66 aa3.94□□□□□ -1.78
RFX4-201ENST00000229387 IGKV2D-28P01615 120 aa3.94□□□□□ -1.78
RFX4-201ENST00000229387 CDC42SE1Q9NRR8 79 aa3.94□□□□□ -1.78
RFX4-201ENST00000229387 TENM4Q6N022 2769 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 IGHV3-38A0A0C4DH36 116 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 RPL36AP83881 106 aaKnown RBP3.93□□□□□ -1.78
RFX4-201ENST00000229387 LINC01554Q52M75 96 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 C9orf66Q5T8R8 295 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 RPL36ALQ969Q0 106 aaKnown RBP3.93□□□□□ -1.78
RFX4-201ENST00000229387 TRBV10-1A0A0K0K1A3 114 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 NDUFA4O00483 81 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 LY6G6DO95868 133 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 LINC00313P59037 77 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 SEC61BP60468 96 aaKnown RBP3.93□□□□□ -1.78
RFX4-201ENST00000229387 KLLNB2CW77 178 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 CHKB-CPT1BH3BT56 60 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 K7EQG2 157 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 HAMPP81172 84 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 Q6ZTI0 123 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 SPTSSBQ8NFR3 76 aa3.93□□□□□ -1.78
RFX4-201ENST00000229387 NBEAL2Q6ZNJ1 2754 aa3.92□□□□□ -1.78
RFX4-201ENST00000229387 PROK1P58294 105 aa3.92□□□□□ -1.78
RFX4-201ENST00000229387 ZCCHC13Q8WW36 166 aaKnown RBP3.92□□□□□ -1.78
RFX4-201ENST00000229387 A0A087X002 238 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 LRCOL1A6NCL2 159 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 Q8N814 137 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 SMR3AQ99954 134 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 HIGD2AQ9BW72 106 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 CDKN2A-AS1Q9UH64 79 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 LOC101927531A0A1B0GV80 90 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 H3BQ85 93 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 SLPIP03973 132 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 DEFB131AP59861 70 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 ASB16-AS1Q495Z4 193 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 KRTAP1-3Q8IUG1 177 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 USMG5Q96IX5 58 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 GCN1Q92616 2671 aaKnown RBP3.91□□□□□ -1.78
RFX4-201ENST00000229387 UBR5O95071 2799 aaPredicted RBP3.91□□□□□ -1.78
RFX4-201ENST00000229387 IGHV4-31P0DP07 118 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 CDC42SE2Q9NRR3 84 aa3.91□□□□□ -1.78
RFX4-201ENST00000229387 IGHV3-16A0A0C4DH30 117 aa3.9□□□□□ -1.78
RFX4-201ENST00000229387 MP68P56378 58 aa3.9□□□□□ -1.78
RFX4-201ENST00000229387 ELOF1P60002 83 aaKnown RBP3.9□□□□□ -1.78
RFX4-201ENST00000229387 Q8N9P0 234 aaPredicted RBP3.9□□□□□ -1.78
RFX4-201ENST00000229387 SND1-IT1Q9HBX3 110 aa3.9□□□□□ -1.78
RFX4-201ENST00000229387 FLNBO75369 2602 aaKnown RBP3.9□□□□□ -1.79
RFX4-201ENST00000229387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.89□□□□□ -1.79
RFX4-201ENST00000229387 C3orf84H3BNL1 204 aa3.89□□□□□ -1.79
RFX4-201ENST00000229387 ZNF702PQ9H963 129 aa3.89□□□□□ -1.79
RFX4-201ENST00000229387 A0A096LNT2 108 aa3.89□□□□□ -1.79
RFX4-201ENST00000229387 SMIM1B2RUZ4 78 aa3.89□□□□□ -1.79
RFX4-201ENST00000229387 MOBPQ13875 183 aa3.89□□□□□ -1.79
RFX4-201ENST00000229387 DEFB113Q30KQ7 82 aa3.89□□□□□ -1.79
RFX4-201ENST00000229387 C9orf116Q5BN46 136 aaPredicted RBP3.89□□□□□ -1.79
RFX4-201ENST00000229387 Q6ZSN1 163 aa3.89□□□□□ -1.79
RFX4-201ENST00000229387 KRTAP9-2Q9BYQ4 174 aa3.89□□□□□ -1.79
RFX4-201ENST00000229387 WFDC10AQ9H1F0 79 aa3.89□□□□□ -1.79
RFX4-201ENST00000229387 IGHV3-53P01767 116 aa3.88□□□□□ -1.79
RFX4-201ENST00000229387 NTM-AS1Q6ZSK4 140 aa3.88□□□□□ -1.79
RFX4-201ENST00000229387 UNC79Q9P2D8 2635 aa3.88□□□□□ -1.79
RFX4-201ENST00000229387 IGKV3OR2-268A0A0C4DH90 116 aa3.88□□□□□ -1.79
RFX4-201ENST00000229387 PLA2G2AP14555 144 aa3.88□□□□□ -1.79
RFX4-201ENST00000229387 DEFB114Q30KQ6 69 aa3.88□□□□□ -1.79
RFX4-201ENST00000229387 SETXQ7Z333 2677 aaKnown RBP3.88□□□□□ -1.79
RFX4-201ENST00000229387 KLK9Q2XQG4 91 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms