RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 NUP188Q5SRE5 1749 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 KNDC1Q76NI1 1749 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 MON2Q7Z3U7 1717 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 ANKARQ7Z5J8 1434 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 NMES1Q9C002 83 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 PIEZO2Q9H5I5 2752 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 LINC00472Q9H8W2 130 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 LINC00474Q9P2X8 69 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 PTPRQQ9UMZ3 2332 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 URB1O60287 2271 aaKnown RBP0.17□□□□□ -2.38
CDKN3-201ENST00000216414 PLXNB2O15031 1838 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 PRDM15P57071 1507 aaPredicted RBP0.17□□□□□ -2.38
CDKN3-201ENST00000216414 MAGI3Q5TCQ9 1506 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 ZFYVE16Q7Z3T8 1539 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 MUC22E2RYF6 1773 aaPredicted RBP0.17□□□□□ -2.38
CDKN3-201ENST00000216414 BCORQ6W2J9 1755 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 RGPD4Q7Z3J3 1758 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 BDP1A6H8Y1 2624 aa0.17□□□□□ -2.38
CDKN3-201ENST00000216414 MAP3K4Q9Y6R4 1608 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 ADGRL2O95490 1459 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 NCOA2Q15596 1464 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 ZNF292O60281 2723 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 PHLPP1O60346 1717 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 CRYBG1Q9Y4K1 1723 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 WNK2Q9Y3S1 2297 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 RB1CC1Q8TDY2 1594 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 ZNF462Q96JM2 2506 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 RRBP1Q9P2E9 1410 aaKnown RBP0.16□□□□□ -2.38
CDKN3-201ENST00000216414 ASXL3Q9C0F0 2248 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 LINC00959A0A1B0GUT2 108 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 H3BUT2 72 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 NDUFA4O00483 81 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 MINOS1Q5TGZ0 78 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 WFDC13Q8IUB5 93 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 C20orf78Q9BR46 151 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 SNHG12Q9BXW3 62 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 SMCO4Q9NRQ5 59 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 PPRC1Q5VV67 1664 aaKnown RBP0.16□□□□□ -2.38
CDKN3-201ENST00000216414 TOPAZ1Q8N9V7 1692 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 ANKRD36A6QL64 1941 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 HMGXB3Q12766 1538 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 RGPD3A6NKT7 1758 aaPredicted RBP0.16□□□□□ -2.38
CDKN3-201ENST00000216414 AKAP12Q02952 1782 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 SPTA1P02549 2419 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 ABCA2Q9BZC7 2435 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 DMBT1Q9UGM3 2413 aaPredicted RBP0.16□□□□□ -2.38
CDKN3-201ENST00000216414 SPTBN1Q01082 2364 aaKnown RBP0.16□□□□□ -2.38
CDKN3-201ENST00000216414 CHD9Q3L8U1 2897 aa0.16□□□□□ -2.38
CDKN3-201ENST00000216414 MARF1Q9Y4F3 1742 aaKnown RBP0.16□□□□□ -2.38
CDKN3-201ENST00000216414 DNAJC13O75165 2243 aa0.15□□□□□ -2.38
CDKN3-201ENST00000216414 USF3Q68DE3 2245 aa0.15□□□□□ -2.38
CDKN3-201ENST00000216414 SSC5DA1L4H1 1573 aa0.15□□□□□ -2.38
CDKN3-201ENST00000216414 SAMD9Q5K651 1589 aa0.15□□□□□ -2.38
CDKN3-201ENST00000216414 TTC37Q6PGP7 1564 aa0.15□□□□□ -2.38
CDKN3-201ENST00000216414 FOCADQ5VW36 1801 aa0.15□□□□□ -2.38
CDKN3-201ENST00000216414 TET3O43151 1660 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 SHPRHQ149N8 1683 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 RGPD2P0DJD1 1756 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 FLNAP21333 2647 aaKnown RBP0.15□□□□□ -2.39
CDKN3-201ENST00000216414 SLIT1O75093 1534 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 LRRC7Q96NW7 1537 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 CACNA1HO95180 2353 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 C2CD3Q4AC94 2353 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 DEFB131BA0A096LNP1 70 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 I3L2K1 104 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 PRH1P02810 166 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 DEFA5Q01523 94 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 NREPQ16612 68 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 KLK9Q2XQG4 91 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 TMEM167BQ9NRX6 74 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 MYO3AQ8NEV4 1616 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 POLQO75417 2590 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 CELSR2Q9HCU4 2923 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 ATP7BP35670 1465 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 ABCC10Q5T3U5 1492 aa0.15□□□□□ -2.39
CDKN3-201ENST00000216414 ROBO1Q9Y6N7 1651 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 LTN1O94822 1766 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 PAPPA2Q9BXP8 1791 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.14□□□□□ -2.39
CDKN3-201ENST00000216414 TULP4Q9NRJ4 1543 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 HIVEP3Q5T1R4 2406 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 KIF14Q15058 1648 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 CC2D2AQ9P2K1 1620 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 ALKQ9UM73 1620 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 TIAM2Q8IVF5 1701 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 KIAA1551Q9HCM1 1747 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 FMN2Q9NZ56 1722 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 ETDCA0A1B0GVM5 59 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 LINC01549A6NIU2 74 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 H3BNG1 76 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 FCER1GP30273 86 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 MAGI2Q86UL8 1455 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 NRXN1Q9ULB1 1477 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 NSD1Q96L73 2696 aaPredicted RBP0.14□□□□□ -2.39
CDKN3-201ENST00000216414 SMARCA2P51531 1590 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 APC2O95996 2303 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 PPLO60437 1756 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 SCN11AQ9UI33 1791 aa0.14□□□□□ -2.39
CDKN3-201ENST00000216414 OTOGQ6ZRI0 2925 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms