RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Myod1P10085 318 aa9.62□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Znf260Q62513 407 aa9.62□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Gpr132Q9Z282 382 aa9.62□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Lrrk2Q5S006 2527 aa9.62□□□□□ -0.87
Ndc1-204ENSMUST00000139560 SeboxP70368 190 aa9.61□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Olfr523Q8VFE7 317 aa9.61□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Trav16nA0A075B634 117 aa9.61□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Gpx7Q99LJ6 186 aa9.61□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Ube2v1Q9CZY3 147 aa9.61□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Myo9aQ8C170 2542 aa9.61□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Ascl2O35885 263 aa9.61□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Gm16686Q3UMN9 131 aa9.61□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Supt4h1bQ9Z199 117 aa9.61□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Igkv4-91A0A075B5L2 119 aa9.61□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Esp24A8R0V6 68 aa9.61□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Hint1P70349 126 aaKnown RBP9.61□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Trbv31A0A075B5J5 111 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Trav21-dv12A0A075B6C4 109 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Ighv9-3A0A0B4J1J5 117 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Bcl6bO88282 474 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Ube2d2bQ6ZWY6 147 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Olfr1402Q8VET1 320 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Fhl3Q9R059 289 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Trbv12-1A0A0B4J1H0 124 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 BC030500E9Q6W0 185 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Gm10203F6QJ09 66 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 PolP10400 120 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 SeleQ00690 612 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Slc25a20Q9Z2Z6 301 aaKnown RBP9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Ighv1-22A0A075B5U7 117 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Colca2F8VPY8 239 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Ang6Q5GAN0 147 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Olfr477Q8VGI6 310 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Lama2Q60675 3118 aaKnown RBP9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Cpsf4lE9Q2N0 280 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Adrb3P25962 400 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Zfp248Q640N4 576 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Isg15Q64339 161 aaKnown RBP9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 BC049762Q8C601 163 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 PgpQ8CHP8 321 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Ssbp2Q9CYZ8 361 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Mettl26Q9DCS2 204 aa9.6□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Gm6525A0A0A6YW33 106 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Foxi3E0CZH3 425 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Thap8E9Q695 213 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Pex7P97865 318 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Lrcol1Q3URS3 161 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Mgst3Q9CPU4 153 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Gm12845A0A0N4SUM5 588 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Eid2bE9Q2Y0 151 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Zic4Q61467 341 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Zfp420Q7TMN8 578 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Tmem177Q8BPE4 311 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Ralgapa2A3KGS3 1872 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 LtaP09225 202 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Rnase6Q9D244 153 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Trip12G5E870 2025 aaKnown RBP9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 BC067074F6RXI4 2391 aa9.59□□□□□ -0.87
Ndc1-204ENSMUST00000139560 Zc2hc1aQ8BJH1 324 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 MyofQ69ZN7 2048 aaKnown RBP9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Plxnd1Q3UH93 1925 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gm10020E9QAZ2 204 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 P06334 169 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gsx1P31315 261 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Cox6a1P43024 111 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Pfn1P62962 140 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gm10645Q3UPY1 145 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Oosp2Q4FZG8 168 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Rpl15Q9CZM2 204 aaKnown RBP9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Timm23Q9WTQ8 209 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Szt2A2A9C3 3431 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gm11020F6ZGD5 61 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Tmem136Q3TYE7 245 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Olfr364-ps1A0A140T8Q2 307 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Foxl2O88470 375 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Csrp1P97315 193 aaKnown RBP9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 SlpiP97430 131 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Snrnp40Q6PE01 358 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gm10118Q8C8J5 116 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Mapk1ip1Q9D7G9 263 aa9.58□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Trav7n-5A0A075B604 112 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gm17677B3GLJ5 116 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Necap2Q9D1J1 266 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 IcosQ9WVS0 200 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Rspo1Q9Z132 265 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Atg2aQ6P4T0 1914 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Dock4P59764 1978 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 A0A1L1SR50 188 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 P01724 129 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 P01727 129 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Defa16P50714 93 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Olfr1209Q3SXJ3 310 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Defa-rs10Q64263 91 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Ypel2Q65Z95 119 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Olfr1380Q7TQT5 311 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gnb1lQ9EQ15 326 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Ypel1Q9ESC7 118 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Gm12169F2Z474 250 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 P01801 115 aa9.57□□□□□ -0.88
Ndc1-204ENSMUST00000139560 Fmc1Q9CR13 113 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms