RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Gm15080A2BI02 449 aa12.03□□□□□ -0.48
Pcdha1-201ENSMUST00000070797 Csrp1P97315 193 aaKnown RBP12.03□□□□□ -0.48
Pcdha1-201ENSMUST00000070797 Olfr1373Q7TQT6 311 aa12.03□□□□□ -0.48
Pcdha1-201ENSMUST00000070797 Wfdc9Q3UW41 83 aa12.03□□□□□ -0.48
Pcdha1-201ENSMUST00000070797 PdpnQ62011 172 aa12.03□□□□□ -0.48
Pcdha1-201ENSMUST00000070797 Ighv1-22A0A075B5U7 117 aa12.02□□□□□ -0.48
Pcdha1-201ENSMUST00000070797 Olfr745Q7TRL9 328 aa12.02□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Gemin7Q9CWY4 129 aa12.02□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 BC035044E0CXF8 138 aa12.02□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Prss58Q8BW11 241 aa12.02□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 4930412O13RikQ9D5M9 106 aa12.02□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Ascc3E9PZJ8 2198 aaKnown RBP12.02□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Gm13090A2A899 111 aa12.02□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Pate2Q3UW31 111 aa12.02□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Snrpd3P62320 126 aaKnown RBP12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Samd5Q3V1H9 173 aa12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Oosp2Q4FZG8 168 aa12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Foxg1Q60987 481 aa12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Arpc1aQ9R0Q6 370 aa12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Gm10767Q3TQP0 103 aa12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Trav7-2Q5R1I3 112 aa12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Klk7Q91VE3 249 aa12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Mrpl36Q99N90 102 aa12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 PinlypQ9CQD7 212 aa12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Dusp14Q9JLY7 198 aa12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Polr2aP08775 1970 aaKnown RBP12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Mrpl55Q9CZ83 127 aa12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Slc25a15Q9WVD5 301 aa12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Rs1Q9Z1L4 224 aa12.01□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Olfr748E9Q9Z0 307 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 COA4Q8BT51 87 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Timm21Q8CCM6 249 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 D730048I06RikQ9CQB8 106 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Cbln3Q9JHG0 197 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Trav6n-6A0A075B6B2 114 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Mettl26Q9DCS2 204 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 A0A1Y7VLU2 103 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Tmem40Q4FJU9 225 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Phlda3Q9WV95 125 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Trav3-4A0A075B654 114 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 A930003A15RikQ3U552 87 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 GaptQ8CB93 157 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Lrrc25Q8K1T1 297 aa12□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Reg1P43137 165 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 4930596D02RikQ3V0H9 216 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Tmem129Q8K304 362 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Olfr211Q8VGH2 309 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 VwceQ3U515 929 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Plce1Q8K4S1 2282 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Pappa2E9PZ87 1789 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Slc25a48Q8BW66 306 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Hrct1Q9D6B9 109 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Scn2aA0A0J9YTW6 2006 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Gm10188Q3V432 135 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Prss46Q5M8S2 314 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 8030423J24RikQ9CX45 142 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Scn10aQ6QIY3 1958 aa11.99□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Cep290Q6A078 2472 aa11.98□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Dkk1O54908 272 aa11.98□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 PolP10400 120 aa11.98□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Ube2wQ8VDW4 151 aa11.98□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 D930048N14RikA2AA67 225 aa11.98□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Tpsab1Q02844 273 aa11.98□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Tmem167aQ9CR64 72 aa11.98□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Rnf115Q9D0C1 305 aa11.98□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Tmem190Q9D2E9 166 aa11.98□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Higd1aQ9JLR9 95 aa11.98□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Trav6-6A0A075B603 114 aa11.98□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 CckP09240 115 aa11.98□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Trav6d-7A0A075B6B0 112 aa11.97□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Rnase2aQ8K196 155 aa11.97□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 NacaP70670 2187 aaKnown RBP11.97□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Gm5129F6YHA9 99 aa11.97□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Hbb-b2P02089 147 aa11.97□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Pate4Q09098 99 aa11.97□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Ighv5-12-4A0A0A6YWG4 117 aa11.97□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Tmem30bQ8BHG3 353 aa11.97□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 C1qtnf5Q8K479 243 aa11.97□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Gm29423A0A087WRM1 55 aa11.96□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Ighv9-3A0A0B4J1J5 117 aa11.96□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Tcrg-C3L7N479 172 aa11.96□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 P03985 172 aa11.96□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Sod1P08228 154 aaKnown RBP11.96□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 PmvkQ9D1G2 192 aa11.96□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 LitafQ9JLJ0 161 aa11.96□□□□□ -0.49
Pcdha1-201ENSMUST00000070797 Gm5089A1L3C8 106 aa11.96□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Tomm6Q9CQN3 74 aa11.96□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Adrb3P25962 400 aa11.95□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Ss18l1Q8BW22 402 aa11.95□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Slurp1Q9Z0K7 110 aa11.95□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Plxna3P70208 1872 aa11.95□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Ccl25O35903 144 aa11.95□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Reg4Q9D8G5 157 aa11.95□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Q80X32 188 aaKnown RBP11.95□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Inafm1E9PV59 130 aa11.95□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Ear14F6YUX7 155 aa11.95□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Phf3B2RQG2 2025 aaKnown RBP11.95□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Trav14-3A0A075B607 120 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Ccl11P48298 97 aa11.94□□□□□ -0.5
Pcdha1-201ENSMUST00000070797 Gm28778A0A087WSK7 233 aa11.94□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms